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ATCC64974_55380-T1, ATCC64974_55380-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_55380-T1
Unique NameATCC64974_55380-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000007.1:3984373..3986075-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_55380-T1 ID=ATCC64974_55380-T1|Name=ATCC64974_55380-T1|organism=Aspergillus niger N402|type=mRNA|length=1703bp|location=Sequence derived from alignment at OGUI01000007.1:3984373..3986075- (Aspergillus niger N402)
ATGAGTGGCCAGGCATCCAGCTATTACAACACCAACCAGAGCTTTGGCGA
TCAGCCTCAGCCGCCGCCGCAACAACAACACCAACAACAACAACAATATG
CGTACTACAACTACGACCAAGCTCCCCAGCCAGCACCAAACCAACACAAT
GGCGGTGATTATCGAGGACCTGAACCGAAACCTCCTCAGGAACCTCCTCA
GGGGCCCCCGCCAACCTACAACCAAGCTGTGTATGGGTTTGATGAAGCTT
TCCAAGTCGAACGGCCCAAGTACAATGACATCTGGGCGGGACTCTTGGTA
GGTATCCCTATGTTTCCACATATAGAAGGTCAATACTAAACCTCTGGCAG
TTCATTGCCGTCTTCCTCGGCTACGTTGCAGTGTCCGGCGTGACCATCCA
TCGCTATGCGAAATACAAAGGCTTCAGCGGCGGCGGCATTTACGATGCGA
GCAACGACTTCTCCCTCAACACAAACACCCTCGTGCTCTTCATATTCGTC
CTCTGTGTGGCCCTCGCCTTCTCATATGCCTACTTTCTCGGTGCGCGATA
CTTCTCCAAGCTCTTCATCTGGGTCACGGGCATCTTGAACATCGTCTTCG
CTCTCGCCACTGGTATCTACTACATCGTTCGGGGGCAATACGGCGGTGGC
ATAGTCTTCCTCATTTTCGGCGTCTTCGCCATCGTCTGCTTCATCAGCTG
GATCCCCCGCATCCCGTTCACAGCCTACATGATGGAGGTCTCCATCGACG
TCTCGCGCCAATACGGCCACATGTTCCTGGTCAGCACCATCGGTGGCCTA
GTCGCCGTCGCCTTCGCCGCCTGGTTCTCCGTCACGCTCGTTTCGATCTA
CGTTGCCTACGAGCCCGACAGCACCGGCGTCAACCCGGCCTGCCCCAATG
GCTCCGGCGGCTGCAGCACCGCCCGAGTCATCGGCCTAGTCGTCTACGTC
ACCTTTGCCATGTACTGGTTCAGCGAATGGCTCAAGAACACCGTACACAC
CACCATCGCCGGCGTCTACGGCTCCTGGTACTTCTTCGCCAACTCGCCGC
AAGGCATGCCCCACGGTGCCACGCGCGGCGCCTTCCGTCGCGCCACCACC
TACTCCTTCGGCAGCATCAGCTTCGGTTCGCTCATTCTCGCCTTGATTCA
AATGCTCCGGCAAGCGTGCTCCATCGCGCAGCAGCAGGAAGCTGCCCAGG
GCAGTCTCATCGGTAGCATTGGGTTCTGGGTCCTGGGTTGTTTCATCTCC
TTGCTCGATTGGCTCGTCACGTTCTTCAATCGCTACGCGTTCTGCCATAT
CGCCCTGTACGGGAAAGCATATATCCCCTCTGCCAAGGATACGTGGAAAA
TGATGAAGGACCGTGGCGTGGACGCCCTTGTTAATGATTGTCTGGTGGGT
CCGGTGTTGACGATGGGGTCCGTGTTCGTCTCGTATGTGTGCGCGCTGCT
GGCATATTTGTATCTCCAGTTCACGAACCCTGGGTATAATCAGGGCGGGG
ATTTCACGGCAGTCATTATGGCGTTTGCGTTTGTGATTGGGTTGCAGATT
TGTCAGATCTTTATGACCCCTGTGAGTAGTGGCATTGAAACTATCTTTGC
TGCTATGGCGTGGGATCCGCAGGTTTTGGTGCATGATCATTCCGAGATGT
ATTATCGGTTGGTGCAGTTGTATCCGAAGGTGCAGCAGGCCATCCATGCT
TGA
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Coding sequence (CDS) from alignment at OGUI01000007.1:3984373..3986075-

>ATCC64974_55380-T1 ID=ATCC64974_55380-T1|Name=ATCC64974_55380-T1|organism=Aspergillus niger N402|type=CDS|length=3300bp|location=Sequence derived from alignment at OGUI01000007.1:3984373..3986075- (Aspergillus niger N402)
TTCATTGCCGTCTTCCTCGGCTACGTTGCAGTGTCCGGCGTGACCATCCA
TCGCTATGCGAAATACAAAGGCTTCAGCGGCGGCGGCATTTACGATGCGA
GCAACGACTTCTCCCTCAACACAAACACCCTCGTGCTCTTCATATTCGTC
CTCTGTGTGGCCCTCGCCTTCTCATATGCCTACTTTCTCGGTGCGCGATA
CTTCTCCAAGCTCTTCATCTGGGTCACGGGCATCTTGAACATCGTCTTCG
CTCTCGCCACTGGTATCTACTACATCGTTCGGGGGCAATACGGCGGTGGC
ATAGTCTTCCTCATTTTCGGCGTCTTCGCCATCGTCTGCTTCATCAGCTG
GATCCCCCGCATCCCGTTCACAGCCTACATGATGGAGGTCTCCATCGACG
TCTCGCGCCAATACGGCCACATGTTCCTGGTCAGCACCATCGGTGGCCTA
GTCGCCGTCGCCTTCGCCGCCTGGTTCTCCGTCACGCTCGTTTCGATCTA
CGTTGCCTACGAGCCCGACAGCACCGGCGTCAACCCGGCCTGCCCCAATG
GCTCCGGCGGCTGCAGCACCGCCCGAGTCATCGGCCTAGTCGTCTACGTC
ACCTTTGCCATGTACTGGTTCAGCGAATGGCTCAAGAACACCGTACACAC
CACCATCGCCGGCGTCTACGGCTCCTGGTACTTCTTCGCCAACTCGCCGC
AAGGCATGCCCCACGGTGCCACGCGCGGCGCCTTCCGTCGCGCCACCACC
TACTCCTTCGGCAGCATCAGCTTCGGTTCGCTCATTCTCGCCTTGATTCA
AATGCTCCGGCAAGCGTGCTCCATCGCGCAGCAGCAGGAAGCTGCCCAGG
GCAGTCTCATCGGTAGCATTGGGTTCTGGGTCCTGGGTTGTTTCATCTCC
TTGCTCGATTGGCTCGTCACGTTCTTCAATCGCTACGCGTTCTGCCATAT
CGCCCTGTACGGGAAAGCATATATCCCCTCTGCCAAGGATACGTGGAAAA
TGATGAAGGACCGTGGCGTGGACGCCCTTGTTAATGATTGTCTGGTGGGT
CCGGTGTTGACGATGGGGTCCGTGTTCGTCTCGTATGTGTGCGCGCTGCT
GGCATATTTGTATCTCCAGTTCACGAACCCTGGGTATAATCAGGGCGGGG
ATTTCACGGCAGTCATTATGGCGTTTGCGTTTGTGATTGGGTTGCAGATT
TGTCAGATCTTTATGACCCCTGTGAGTAGTGGCATTGAAACTATCTTTGC
TGCTATGGCGTGGGATCCGCAGGTTTTGGTGCATGATCATTCCGAGATGT
ATTATCGGTTGGTGCAGTTGTATCCGAAGGTGCAGCAGGCCATCCATGCT
TGAATGAGTGGCCAGGCATCCAGCTATTACAACACCAACCAGAGCTTTGG
CGATCAGCCTCAGCCGCCGCCGCAACAACAACACCAACAACAACAACAAT
ATGCGTACTACAACTACGACCAAGCTCCCCAGCCAGCACCAAACCAACAC
AATGGCGGTGATTATCGAGGACCTGAACCGAAACCTCCTCAGGAACCTCC
TCAGGGGCCCCCGCCAACCTACAACCAAGCTGTGTATGGGTTTGATGAAG
CTTTCCAAGTCGAACGGCCCAAGTACAATGACATCTGGGCGGGACTCTTG
TTCATTGCCGTCTTCCTCGGCTACGTTGCAGTGTCCGGCGTGACCATCCA
TCGCTATGCGAAATACAAAGGCTTCAGCGGCGGCGGCATTTACGATGCGA
GCAACGACTTCTCCCTCAACACAAACACCCTCGTGCTCTTCATATTCGTC
CTCTGTGTGGCCCTCGCCTTCTCATATGCCTACTTTCTCGGTGCGCGATA
CTTCTCCAAGCTCTTCATCTGGGTCACGGGCATCTTGAACATCGTCTTCG
CTCTCGCCACTGGTATCTACTACATCGTTCGGGGGCAATACGGCGGTGGC
ATAGTCTTCCTCATTTTCGGCGTCTTCGCCATCGTCTGCTTCATCAGCTG
GATCCCCCGCATCCCGTTCACAGCCTACATGATGGAGGTCTCCATCGACG
TCTCGCGCCAATACGGCCACATGTTCCTGGTCAGCACCATCGGTGGCCTA
GTCGCCGTCGCCTTCGCCGCCTGGTTCTCCGTCACGCTCGTTTCGATCTA
CGTTGCCTACGAGCCCGACAGCACCGGCGTCAACCCGGCCTGCCCCAATG
GCTCCGGCGGCTGCAGCACCGCCCGAGTCATCGGCCTAGTCGTCTACGTC
ACCTTTGCCATGTACTGGTTCAGCGAATGGCTCAAGAACACCGTACACAC
CACCATCGCCGGCGTCTACGGCTCCTGGTACTTCTTCGCCAACTCGCCGC
AAGGCATGCCCCACGGTGCCACGCGCGGCGCCTTCCGTCGCGCCACCACC
TACTCCTTCGGCAGCATCAGCTTCGGTTCGCTCATTCTCGCCTTGATTCA
AATGCTCCGGCAAGCGTGCTCCATCGCGCAGCAGCAGGAAGCTGCCCAGG
GCAGTCTCATCGGTAGCATTGGGTTCTGGGTCCTGGGTTGTTTCATCTCC
TTGCTCGATTGGCTCGTCACGTTCTTCAATCGCTACGCGTTCTGCCATAT
CGCCCTGTACGGGAAAGCATATATCCCCTCTGCCAAGGATACGTGGAAAA
TGATGAAGGACCGTGGCGTGGACGCCCTTGTTAATGATTGTCTGGTGGGT
CCGGTGTTGACGATGGGGTCCGTGTTCGTCTCGTATGTGTGCGCGCTGCT
GGCATATTTGTATCTCCAGTTCACGAACCCTGGGTATAATCAGGGCGGGG
ATTTCACGGCAGTCATTATGGCGTTTGCGTTTGTGATTGGGTTGCAGATT
TGTCAGATCTTTATGACCCCTGTGAGTAGTGGCATTGAAACTATCTTTGC
TGCTATGGCGTGGGATCCGCAGGTTTTGGTGCATGATCATTCCGAGATGT
ATTATCGGTTGGTGCAGTTGTATCCGAAGGTGCAGCAGGCCATCCATGCT
TGAATGAGTGGCCAGGCATCCAGCTATTACAACACCAACCAGAGCTTTGG
CGATCAGCCTCAGCCGCCGCCGCAACAACAACACCAACAACAACAACAAT
ATGCGTACTACAACTACGACCAAGCTCCCCAGCCAGCACCAAACCAACAC
AATGGCGGTGATTATCGAGGACCTGAACCGAAACCTCCTCAGGAACCTCC
TCAGGGGCCCCCGCCAACCTACAACCAAGCTGTGTATGGGTTTGATGAAG
CTTTCCAAGTCGAACGGCCCAAGTACAATGACATCTGGGCGGGACTCTTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PNS1ATCC64974_55380Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55380-T1ATCC64974_55380-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55380-T1.cdsATCC64974_55380-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_55380-T1.exon2ATCC64974_55380-T1.exon2Aspergillus niger N402exon
ATCC64974_55380-T1.exon1ATCC64974_55380-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007603
DBxrefPFAM:PF04515
Product neither null mutation nor overexpression affects choline transport
ProductPutative choline transporter
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000007.1supercontigOGUI01000007.1:3984373..3986075 -
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