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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000008.1:479252..480151+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_60440-T1 ID=ATCC64974_60440-T1|Name=ATCC64974_60440-T1|organism=Aspergillus niger N402|type=mRNA|length=900bp|location=Sequence derived from alignment at OGUI01000008.1:479252..480151+ (Aspergillus niger N402)
ATGAACTCTTCACCGCCTCACTCTCTCACCTCTTCTCCTTCCTTCGGAGC
CCGTCGCTCTTCTCGACCCTCCCTCACTCTCGACATGTCCAATCTTCCCC
CTCTTACACAACCCACACCTCCCTCCAACACCCTCATCATAACCGACCTG
AACGACATTCTTCTCTTCCAACCCGACTCCCTCGCCAACCTCAGAGCCTA
CCTCGAATCTTTGGCTCCTCTCAACTCCTTCTCCCCCCTCCCCTCCCTCC
GCCGCATCCTCTGCTCCTTCCACACGGACTCCGACGCTCTCCGCATTCGC
AAACTCCTAACTGGCGCACCACTGCTCAACCGCCCCATCATCCCCAAGAT
CTACTTCGGTGAGCCAACCCCCATCATGGACGACCTCGAATCCCGCCCCA
AACTCCTGGAGGCCCCGCAAGTCGACAAGCTCTTCTTCATCTCACCGCCG
CCCTCCCCGCCCCACGGCTGGGTCATGCGCCAAGAAGATCCCCCGAACAA
GGAAGTCCACGCCAGCGATCTCGCACAGGCCTTGGCCAAGTTGAAGACGG
AGCAGTCCGGTGTGGAGGAAGCAGCGACGGGAGTTGTCGTTTCATCTATC
GAACAGCAGCAGCAGCAACAACAACAACAACAACCAGGTACCCCGATGTC
CATGACCTCGGATAAGAGGACGAGCAGTTGGCCCGTGTCGCTATCGCAGA
CGCGCAGCCGGAGCAGCACCCTCATCTACCACCCCGAGGACCATGGAGGT
AGCCCTAACTTGCCCGCTGTCATGGTCGAGGACACGAGTGCTTCCCCAGA
CGAGGATATTGATATGGACCTGAGTCCGATCGAGATGTCGGTCAAGAAGA
TGCCGCCCAAGACGTCGCGGCCACCAGTGGAGCTGATGGGAGGGAATTAG
back to topCoding sequence (CDS) from alignment at OGUI01000008.1:479252..480151+ >ATCC64974_60440-T1 ID=ATCC64974_60440-T1|Name=ATCC64974_60440-T1|organism=Aspergillus niger N402|type=CDS|length=900bp|location=Sequence derived from alignment at OGUI01000008.1:479252..480151+ (Aspergillus niger N402)
ATGAACTCTTCACCGCCTCACTCTCTCACCTCTTCTCCTTCCTTCGGAGC
CCGTCGCTCTTCTCGACCCTCCCTCACTCTCGACATGTCCAATCTTCCCC
CTCTTACACAACCCACACCTCCCTCCAACACCCTCATCATAACCGACCTG
AACGACATTCTTCTCTTCCAACCCGACTCCCTCGCCAACCTCAGAGCCTA
CCTCGAATCTTTGGCTCCTCTCAACTCCTTCTCCCCCCTCCCCTCCCTCC
GCCGCATCCTCTGCTCCTTCCACACGGACTCCGACGCTCTCCGCATTCGC
AAACTCCTAACTGGCGCACCACTGCTCAACCGCCCCATCATCCCCAAGAT
CTACTTCGGTGAGCCAACCCCCATCATGGACGACCTCGAATCCCGCCCCA
AACTCCTGGAGGCCCCGCAAGTCGACAAGCTCTTCTTCATCTCACCGCCG
CCCTCCCCGCCCCACGGCTGGGTCATGCGCCAAGAAGATCCCCCGAACAA
GGAAGTCCACGCCAGCGATCTCGCACAGGCCTTGGCCAAGTTGAAGACGG
AGCAGTCCGGTGTGGAGGAAGCAGCGACGGGAGTTGTCGTTTCATCTATC
GAACAGCAGCAGCAGCAACAACAACAACAACAACCAGGTACCCCGATGTC
CATGACCTCGGATAAGAGGACGAGCAGTTGGCCCGTGTCGCTATCGCAGA
CGCGCAGCCGGAGCAGCACCCTCATCTACCACCCCGAGGACCATGGAGGT
AGCCCTAACTTGCCCGCTGTCATGGTCGAGGACACGAGTGCTTCCCCAGA
CGAGGATATTGATATGGACCTGAGTCCGATCGAGATGTCGGTCAAGAAGA
TGCCGCCCAAGACGTCGCGGCCACCAGTGGAGCTGATGGGAGGGAATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019722 | calcium-mediated signaling |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_60440-T1 | ATCC64974_60440-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR006931 |
| DBxref | InterPro:IPR012677 |
| DBxref | PFAM:PF04847 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000008.1 | supercontig | OGUI01000008.1:479252..480151 + |
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