You are here

Home

ATCC64974_68260-T1, ATCC64974_68260-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_68260-T1
Unique NameATCC64974_68260-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:1754706..1757634-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_68260-T1 ID=ATCC64974_68260-T1|Name=ATCC64974_68260-T1|organism=Aspergillus niger N402|type=mRNA|length=2929bp|location=Sequence derived from alignment at OGUI01000010.1:1754706..1757634- (Aspergillus niger N402)
ATGCCATTTTCAAAATTCATGTCCGGCAGACCTGGTATCACGGAGAAGCG
GCTGTCGGCTCATCGCTTCCAGCAGCTTCCCGACATGGCCCCGGATAATA
TGATGAATCCTAACGACGTCACTATCGACATCCCCTTGAACCCGGTTCCC
AGTCGGAATCAGACCGGCGCTCGCAAGACAAGTAGCAATGTGGGAGGCTC
GCCGAATCCGTATCAACCACCCGGCGATGACAAAGGCATTGACGGTGAGA
AGGAGAGCTTGGTTGCGCCAAACCCTGGCATGCGCCGACGCATTGACGAA
AGCACTGGACGTTCACTAGAAGACCCCGAGGATGGCACCGTCACTCGCAT
GGGCCGCATCTACCAGGCCGTCCTGAATTACTCTGTCCTCACCCGCTACT
TCATCTATGTGGCCCCGCTCGCAATTCTACTCGCCATCCCCATTATCGTG
GGAGCAACGGTCGCGCAGGACGCGACTATCGGCGGAGTTACTCTGCCTTG
GTTCTGGTTCTGGATTGAGATCGTCTGGATCAGTCTGTGGTTGTGCAAAC
TGGCAGCCAAACTCTTGCCGTACATCTTCCAAACCCTCATCGGGTTTGTG
AGTTCAGGAACTCGGAAATATGCTCTCATTCTACGCAAACTGGAAATGCC
AATTGCAACCGTGCTGTGGTGCGTGGTGTGCTTGGTCACCTTTTTGCCTG
TAAGTCTCGCTTGATCTTCCTGATACGTGCCCCCGACTAATTTCCATCTA
GGTCATGACACAAAATCCCCATCAGAAAGCCAAGGGGGATACCTCTACCA
AATCCTGGGAGAAGTCTATCAAGAACATCCTGTTTGCCCTCTTCGTCTGC
AGCTTGATTTTCCTGGCCGAGAAAACCATGGTTCATCTCATCTCGATCAG
CTACCACCGCAAGCAGTTCGATGCCCGCATCAAAGAATCGAAGCGCAATG
TGTATCTAGTGGCTCTGTTGTTCGACGCCTCGCGCCACATGTTCCCCATG
TACTGCAAAGAGTTCCAAGAGGAAGACGCTGCCATTTCCGACTCCATTCT
TCGCTCCGCCGCCATCAAGACCCGCACTGGTAGCTCATCAGCGCCTTTGC
GCCTTATCCGGGGCGTGGGCCAAAATGTCCACCAGTTCGGTAACAAAGTT
ACGGCGGCTTTCGGCGACGTGGCACATGAATTGACTGGCAAGCAAGTTTT
CAACCCCACCTCCACTCGGTCCGTCGTCACCCAGGCTCTGGAACACAGAC
GGACGTCGGAGGCGCTAGCCCGAAGAATTTGGATGTCTTTCGTCATCGAA
GGCCGTGATGCTCTGTACTTTGACGATATCTGTGAGGTCCTAGGAGCTGG
CATGGAGGCGGAGGCCGAGGAATGTTTCCACATGCTGGATCGCGACGGCA
ACGGGGACATCAGCTTGGAGGAGATGATCTTGGCCATCGGGGAAGTCCGC
CGGTTGAGAAAGTCCCTGAACAACAGTCTCCACGATGTTGACCAGGCGAT
CCACGTTCTGGACAACCTCTTGCTGACCGTGGCGGGCATCATCGCTATTT
TGGTCTTTGTGTCTTTCGTGACCAGTGGCTTCGGTACCGTTATCGCGGCG
GGTGCCACTTCCCTGCTTTCTCTGAGTTTCGTCTTCTCGACCACCGCACA
GGAAGTGCTGGGTTCGTGTATCTTCCTCTTCGTCAAGCATCCCTTTGATG
TGGGCGACCGTGTGGAAATCAGCGACAAGCCGTACTTTGTCGAGCGCATC
TCCTTGCTGTTCACCGTGTTCCGGAACGTCAACGACCACCGCATCACGCA
GGTTCCGAACGTCGTCCTCAACACTCTATGGATTGACAACTTCACCCGTG
CCAATGCCATGCATGAGCGCCTCACCGTGCCCGTCAGCTTCGAGACCACC
TTCTCCAACGTCCAGCTTCTCCAAGAGGAGATGGAGAGCTTCGTACGCGA
CAAGGACAACTGCCGCGACTTCCAACCAGAGGTCACCATTGATGTGGTGG
GCCTGGGTGACATGGACAAGATGGAGCTGAGTGTCTTGATTTGCCACAAA
TCCAACTGGTCGAACGAAGCTGTCCGTGCTGCCCGTCGCTCGAAGTTCAT
GTGCGCTTTGATTTCTGCTGTGCGCAAGGTCCCTATTCGCGCTCCAGGCG
CCAGCGACGACGCCGATGATGACAAAACCGAGAAGGATGACAACAAGTCG
GATGCAGGACACGGAGACCAAACCCTACCCGTCCGCCAGGTCTCCATCGC
CAGCGAAGGCATGCGACGGGCTAACACTACGGCTGGCGTCTCTTACACCG
AATCCCGCTCAACTGGCTTCGACCTCGGCAACTCCCCGCAGTCACTGCAG
CGTCGTGGCATGGGCGCCTCCAGCTCCTACAGTGAAGGCCTCACCGCAGA
GCACGCAGCCCGGTCGCAGGACGGCTCCCGCGACGGTCACGAAGTCGACC
ACTACCAGACGCCCGTGGGATCTCCCGGTCAGGAGCGCCAACTCAACGTG
ACCTACGGACTCATGACTCGCGAACCGTCAACGGGTCGTCGCAAGGAAGG
CCGTAGCTCGTACGTCGAGCCTGAACCCGAGCCCCAGCCTGTGGTCGCCC
CTCGAGGCGATGTCCCGGTGCTCTCGGAGCCAGTCCCTCCTCGTCATCGC
CAGGAGGCGCAGCCCACGCTGCCCCAGGTCGCAGTGCCCCAGCCTCTCGC
GGGGGCCGCAGTGTCCCAGCCGCCTCAGCAGCCGCCCGAGTATTACAACT
ACCCGGGACAGTACTACGACCCATCGGAGGACCCATACGACCCGAACCAG
CCGTTCGAGCTTCCGTCGATGCACGAGCAGACGCCAGACGGACGGGAGCA
CCCCTCGACGCATCTGACAGAAACCGAGCCAGGACGGTATGTGCCACGAC
GGCCGTACGAGGGAGCGGGTAACCAGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:1754706..1757634-

>ATCC64974_68260-T1 ID=ATCC64974_68260-T1|Name=ATCC64974_68260-T1|organism=Aspergillus niger N402|type=CDS|length=5754bp|location=Sequence derived from alignment at OGUI01000010.1:1754706..1757634- (Aspergillus niger N402)
GTCATGACACAAAATCCCCATCAGAAAGCCAAGGGGGATACCTCTACCAA
ATCCTGGGAGAAGTCTATCAAGAACATCCTGTTTGCCCTCTTCGTCTGCA
GCTTGATTTTCCTGGCCGAGAAAACCATGGTTCATCTCATCTCGATCAGC
TACCACCGCAAGCAGTTCGATGCCCGCATCAAAGAATCGAAGCGCAATGT
GTATCTAGTGGCTCTGTTGTTCGACGCCTCGCGCCACATGTTCCCCATGT
ACTGCAAAGAGTTCCAAGAGGAAGACGCTGCCATTTCCGACTCCATTCTT
CGCTCCGCCGCCATCAAGACCCGCACTGGTAGCTCATCAGCGCCTTTGCG
CCTTATCCGGGGCGTGGGCCAAAATGTCCACCAGTTCGGTAACAAAGTTA
CGGCGGCTTTCGGCGACGTGGCACATGAATTGACTGGCAAGCAAGTTTTC
AACCCCACCTCCACTCGGTCCGTCGTCACCCAGGCTCTGGAACACAGACG
GACGTCGGAGGCGCTAGCCCGAAGAATTTGGATGTCTTTCGTCATCGAAG
GCCGTGATGCTCTGTACTTTGACGATATCTGTGAGGTCCTAGGAGCTGGC
ATGGAGGCGGAGGCCGAGGAATGTTTCCACATGCTGGATCGCGACGGCAA
CGGGGACATCAGCTTGGAGGAGATGATCTTGGCCATCGGGGAAGTCCGCC
GGTTGAGAAAGTCCCTGAACAACAGTCTCCACGATGTTGACCAGGCGATC
CACGTTCTGGACAACCTCTTGCTGACCGTGGCGGGCATCATCGCTATTTT
GGTCTTTGTGTCTTTCGTGACCAGTGGCTTCGGTACCGTTATCGCGGCGG
GTGCCACTTCCCTGCTTTCTCTGAGTTTCGTCTTCTCGACCACCGCACAG
GAAGTGCTGGGTTCGTGTATCTTCCTCTTCGTCAAGCATCCCTTTGATGT
GGGCGACCGTGTGGAAATCAGCGACAAGCCGTACTTTGTCGAGCGCATCT
CCTTGCTGTTCACCGTGTTCCGGAACGTCAACGACCACCGCATCACGCAG
GTTCCGAACGTCGTCCTCAACACTCTATGGATTGACAACTTCACCCGTGC
CAATGCCATGCATGAGCGCCTCACCGTGCCCGTCAGCTTCGAGACCACCT
TCTCCAACGTCCAGCTTCTCCAAGAGGAGATGGAGAGCTTCGTACGCGAC
AAGGACAACTGCCGCGACTTCCAACCAGAGGTCACCATTGATGTGGTGGG
CCTGGGTGACATGGACAAGATGGAGCTGAGTGTCTTGATTTGCCACAAAT
CCAACTGGTCGAACGAAGCTGTCCGTGCTGCCCGTCGCTCGAAGTTCATG
TGCGCTTTGATTTCTGCTGTGCGCAAGGTCCCTATTCGCGCTCCAGGCGC
CAGCGACGACGCCGATGATGACAAAACCGAGAAGGATGACAACAAGTCGG
ATGCAGGACACGGAGACCAAACCCTACCCGTCCGCCAGGTCTCCATCGCC
AGCGAAGGCATGCGACGGGCTAACACTACGGCTGGCGTCTCTTACACCGA
ATCCCGCTCAACTGGCTTCGACCTCGGCAACTCCCCGCAGTCACTGCAGC
GTCGTGGCATGGGCGCCTCCAGCTCCTACAGTGAAGGCCTCACCGCAGAG
CACGCAGCCCGGTCGCAGGACGGCTCCCGCGACGGTCACGAAGTCGACCA
CTACCAGACGCCCGTGGGATCTCCCGGTCAGGAGCGCCAACTCAACGTGA
CCTACGGACTCATGACTCGCGAACCGTCAACGGGTCGTCGCAAGGAAGGC
CGTAGCTCGTACGTCGAGCCTGAACCCGAGCCCCAGCCTGTGGTCGCCCC
TCGAGGCGATGTCCCGGTGCTCTCGGAGCCAGTCCCTCCTCGTCATCGCC
AGGAGGCGCAGCCCACGCTGCCCCAGGTCGCAGTGCCCCAGCCTCTCGCG
GGGGCCGCAGTGTCCCAGCCGCCTCAGCAGCCGCCCGAGTATTACAACTA
CCCGGGACAGTACTACGACCCATCGGAGGACCCATACGACCCGAACCAGC
CGTTCGAGCTTCCGTCGATGCACGAGCAGACGCCAGACGGACGGGAGCAC
CCCTCGACGCATCTGACAGAAACCGAGCCAGGACGGTATGTGCCACGACG
GCCGTACGAGGGAGCGGGTAACCAGTAGATGCCATTTTCAAAATTCATGT
CCGGCAGACCTGGTATCACGGAGAAGCGGCTGTCGGCTCATCGCTTCCAG
CAGCTTCCCGACATGGCCCCGGATAATATGATGAATCCTAACGACGTCAC
TATCGACATCCCCTTGAACCCGGTTCCCAGTCGGAATCAGACCGGCGCTC
GCAAGACAAGTAGCAATGTGGGAGGCTCGCCGAATCCGTATCAACCACCC
GGCGATGACAAAGGCATTGACGGTGAGAAGGAGAGCTTGGTTGCGCCAAA
CCCTGGCATGCGCCGACGCATTGACGAAAGCACTGGACGTTCACTAGAAG
ACCCCGAGGATGGCACCGTCACTCGCATGGGCCGCATCTACCAGGCCGTC
CTGAATTACTCTGTCCTCACCCGCTACTTCATCTATGTGGCCCCGCTCGC
AATTCTACTCGCCATCCCCATTATCGTGGGAGCAACGGTCGCGCAGGACG
CGACTATCGGCGGAGTTACTCTGCCTTGGTTCTGGTTCTGGATTGAGATC
GTCTGGATCAGTCTGTGGTTGTGCAAACTGGCAGCCAAACTCTTGCCGTA
CATCTTCCAAACCCTCATCGGGTTTGTGAGTTCAGGAACTCGGAAATATG
CTCTCATTCTACGCAAACTGGAAATGCCAATTGCAACCGTGCTGTGGTGC
GTGGTGTGCTTGGTCACCTTTTTGCCTGTCATGACACAAAATCCCCATCA
GAAAGCCAAGGGGGATACCTCTACCAAATCCTGGGAGAAGTCTATCAAGA
ACATCCTGTTTGCCCTCTTCGTCTGCAGCTTGATTTTCCTGGCCGAGAAA
ACCATGGTTCATCTCATCTCGATCAGCTACCACCGCAAGCAGTTCGATGC
CCGCATCAAAGAATCGAAGCGCAATGTGTATCTAGTGGCTCTGTTGTTCG
ACGCCTCGCGCCACATGTTCCCCATGTACTGCAAAGAGTTCCAAGAGGAA
GACGCTGCCATTTCCGACTCCATTCTTCGCTCCGCCGCCATCAAGACCCG
CACTGGTAGCTCATCAGCGCCTTTGCGCCTTATCCGGGGCGTGGGCCAAA
ATGTCCACCAGTTCGGTAACAAAGTTACGGCGGCTTTCGGCGACGTGGCA
CATGAATTGACTGGCAAGCAAGTTTTCAACCCCACCTCCACTCGGTCCGT
CGTCACCCAGGCTCTGGAACACAGACGGACGTCGGAGGCGCTAGCCCGAA
GAATTTGGATGTCTTTCGTCATCGAAGGCCGTGATGCTCTGTACTTTGAC
GATATCTGTGAGGTCCTAGGAGCTGGCATGGAGGCGGAGGCCGAGGAATG
TTTCCACATGCTGGATCGCGACGGCAACGGGGACATCAGCTTGGAGGAGA
TGATCTTGGCCATCGGGGAAGTCCGCCGGTTGAGAAAGTCCCTGAACAAC
AGTCTCCACGATGTTGACCAGGCGATCCACGTTCTGGACAACCTCTTGCT
GACCGTGGCGGGCATCATCGCTATTTTGGTCTTTGTGTCTTTCGTGACCA
GTGGCTTCGGTACCGTTATCGCGGCGGGTGCCACTTCCCTGCTTTCTCTG
AGTTTCGTCTTCTCGACCACCGCACAGGAAGTGCTGGGTTCGTGTATCTT
CCTCTTCGTCAAGCATCCCTTTGATGTGGGCGACCGTGTGGAAATCAGCG
ACAAGCCGTACTTTGTCGAGCGCATCTCCTTGCTGTTCACCGTGTTCCGG
AACGTCAACGACCACCGCATCACGCAGGTTCCGAACGTCGTCCTCAACAC
TCTATGGATTGACAACTTCACCCGTGCCAATGCCATGCATGAGCGCCTCA
CCGTGCCCGTCAGCTTCGAGACCACCTTCTCCAACGTCCAGCTTCTCCAA
GAGGAGATGGAGAGCTTCGTACGCGACAAGGACAACTGCCGCGACTTCCA
ACCAGAGGTCACCATTGATGTGGTGGGCCTGGGTGACATGGACAAGATGG
AGCTGAGTGTCTTGATTTGCCACAAATCCAACTGGTCGAACGAAGCTGTC
CGTGCTGCCCGTCGCTCGAAGTTCATGTGCGCTTTGATTTCTGCTGTGCG
CAAGGTCCCTATTCGCGCTCCAGGCGCCAGCGACGACGCCGATGATGACA
AAACCGAGAAGGATGACAACAAGTCGGATGCAGGACACGGAGACCAAACC
CTACCCGTCCGCCAGGTCTCCATCGCCAGCGAAGGCATGCGACGGGCTAA
CACTACGGCTGGCGTCTCTTACACCGAATCCCGCTCAACTGGCTTCGACC
TCGGCAACTCCCCGCAGTCACTGCAGCGTCGTGGCATGGGCGCCTCCAGC
TCCTACAGTGAAGGCCTCACCGCAGAGCACGCAGCCCGGTCGCAGGACGG
CTCCCGCGACGGTCACGAAGTCGACCACTACCAGACGCCCGTGGGATCTC
CCGGTCAGGAGCGCCAACTCAACGTGACCTACGGACTCATGACTCGCGAA
CCGTCAACGGGTCGTCGCAAGGAAGGCCGTAGCTCGTACGTCGAGCCTGA
ACCCGAGCCCCAGCCTGTGGTCGCCCCTCGAGGCGATGTCCCGGTGCTCT
CGGAGCCAGTCCCTCCTCGTCATCGCCAGGAGGCGCAGCCCACGCTGCCC
CAGGTCGCAGTGCCCCAGCCTCTCGCGGGGGCCGCAGTGTCCCAGCCGCC
TCAGCAGCCGCCCGAGTATTACAACTACCCGGGACAGTACTACGACCCAT
CGGAGGACCCATACGACCCGAACCAGCCGTTCGAGCTTCCGTCGATGCAC
GAGCAGACGCCAGACGGACGGGAGCACCCCTCGACGCATCTGACAGAAAC
CGAGCCAGGACGGTATGTGCCACGACGGCCGTACGAGGGAGCGGGTAACC
AGTAGATGCCATTTTCAAAATTCATGTCCGGCAGACCTGGTATCACGGAG
AAGCGGCTGTCGGCTCATCGCTTCCAGCAGCTTCCCGACATGGCCCCGGA
TAATATGATGAATCCTAACGACGTCACTATCGACATCCCCTTGAACCCGG
TTCCCAGTCGGAATCAGACCGGCGCTCGCAAGACAAGTAGCAATGTGGGA
GGCTCGCCGAATCCGTATCAACCACCCGGCGATGACAAAGGCATTGACGG
TGAGAAGGAGAGCTTGGTTGCGCCAAACCCTGGCATGCGCCGACGCATTG
ACGAAAGCACTGGACGTTCACTAGAAGACCCCGAGGATGGCACCGTCACT
CGCATGGGCCGCATCTACCAGGCCGTCCTGAATTACTCTGTCCTCACCCG
CTACTTCATCTATGTGGCCCCGCTCGCAATTCTACTCGCCATCCCCATTA
TCGTGGGAGCAACGGTCGCGCAGGACGCGACTATCGGCGGAGTTACTCTG
CCTTGGTTCTGGTTCTGGATTGAGATCGTCTGGATCAGTCTGTGGTTGTG
CAAACTGGCAGCCAAACTCTTGCCGTACATCTTCCAAACCCTCATCGGGT
TTGTGAGTTCAGGAACTCGGAAATATGCTCTCATTCTACGCAAACTGGAA
ATGCCAATTGCAACCGTGCTGTGGTGCGTGGTGTGCTTGGTCACCTTTTT
GCCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_68260ATCC64974_68260Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_68260-T1ATCC64974_68260-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_68260-T1.cdsATCC64974_68260-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_68260-T1.exon2ATCC64974_68260-T1.exon2Aspergillus niger N402exon
ATCC64974_68260-T1.exon1ATCC64974_68260-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR018247
DBxrefInterPro:IPR006685
DBxrefInterPro:IPR016688
DBxrefInterPro:IPR002048
DBxrefPFAM:PF00924
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:1754706..1757634 -
Powered by Drupal