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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000010.1:2077375..2078503- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_69290-T1 ID=ATCC64974_69290-T1|Name=ATCC64974_69290-T1|organism=Aspergillus niger N402|type=mRNA|length=1129bp|location=Sequence derived from alignment at OGUI01000010.1:2077375..2078503- (Aspergillus niger N402) ATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTCAAGCTGAACACCGG
GGCTGAGATCCCTGCTCTCGGACTCGGTATGATACATCTTCAGATAGTAA
CCACAAGGATATTCTGGCTAACGTCTGTGCAGGAACCTGGCAGTCAGGCC
CTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATCTCCGTTGGATACAGA
CACATTGATACCGCTTTTGCTTACGGAAACGAAGGAGAAGTCGGCAAGGG
TATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGCGAGAGGACCTCTTTG
TCACAACTAAGCTCTGGAGCACATGGCACTACCGAGTGGAACAGGCTCTG
GACCAGAGCTTGAAGAACTTGGGGCTGGACTATGTTGATCTCTACCTGGT
CCACTGGCCGGTGGCTATGAACCCTAATGGTGAGTCCTCCACTAATTTAG
ACTCAAGGCGATGCGCATGTTGACATTACAAAGGAAACCACCCCAATATT
CCCACCCTTCCCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCATAT
CAACACTTGGAAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGG
CCATTGGTGTTTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTCGCC
CAAGCCACCGTGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTGCCT
TCCCCAGCAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACATCA
CGGCATACAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACAGCAGAG
CCCATTGTCGAGGTTGCGAAGAAGAAGGGTGTCGACCCAGCCACGGTCCT
GCTGAGCTGGCACAGTACGTATCTTCCATGCCGAATAATGCGAGAATTAT
CACTAACTGCATCCTCCGTGTAGTCAGCCGTGGCTCTTCCGTCCTTGCCA
AGTCTGTGAACCCCTCTCGGATTGAGGGCAACCGCAACCTGGTGGCATTG
GATGATGCTGATATGGCTACCATTGCCAAATACACGAATGACCTGGCCTC
GAAGAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTCG
GATTCCCGGACAAGATCGGCCGCGTATAA back to topCoding sequence (CDS) from alignment at OGUI01000010.1:2077375..2078503- >ATCC64974_69290-T1 ID=ATCC64974_69290-T1|Name=ATCC64974_69290-T1|organism=Aspergillus niger N402|type=CDS|length=3840bp|location=Sequence derived from alignment at OGUI01000010.1:2077375..2078503- (Aspergillus niger N402) TCAGCCGTGGCTCTTCCGTCCTTGCCAAGTCTGTGAACCCCTCTCGGATT GAGGGCAACCGCAACCTGGTGGCATTGGATGATGCTGATATGGCTACCAT TGCCAAATACACGAATGACCTGGCCTCGAAGAACGCCTTTCAGCGTTTTG TTTTCCCTCCTTTCAAGCTTGACTTCGGATTCCCGGACAAGATCGGCCGC GTATAAGAAACCACCCCAATATTCCCACCCTTCCCGACGGTTCCCGCGAC CTGCACCTCAACCACTCCCATATCAACACTTGGAAGGATATGGAGAAGCT TGTCGGTAGCGGAAAGACCAAGGCCATTGGTGTTTGCAACTACAGCAGGC CCTACCTTGAGGAGCTCCTCGCCCAAGCCACCGTGGTCCCGGCTGTCAAC CAGATTGAGAACCACCCCTGCCTTCCCCAGCAGGAGGCGGTCGACTTCTG CAAGGAGAAGGGCATTCACATCACGGCATACAGCCCTCTCGGCAGCACGG GCAGTCCGCTGCTGACAGCAGAGCCCATTGTCGAGGTTGCGAAGAAGAAG GGTGTCGACCCAGCCACGGTCCTGCTGAGCTGGCACAGAACCTGGCAGTC AGGCCCTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATCTCCGTTGGAT ACAGACACATTGATACCGCTTTTGCTTACGGAAACGAAGGAGAAGTCGGC AAGGGTATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGCGAGAGGACCT CTTTGTCACAACTAAGCTCTGGAGCACATGGCACTACCGAGTGGAACAGG CTCTGGACCAGAGCTTGAAGAACTTGGGGCTGGACTATGTTGATCTCTAC CTGGTCCACTGGCCGGTGGCTATGAACCCTAATGATGGGTTCGACTTCGA CCGTCGCAGACACCCGCTTCAAGCTGAACACCGGGGCTGAGATCCCTGCT CTCGGACTCGTCAGCCGTGGCTCTTCCGTCCTTGCCAAGTCTGTGAACCC CTCTCGGATTGAGGGCAACCGCAACCTGGTGGCATTGGATGATGCTGATA TGGCTACCATTGCCAAATACACGAATGACCTGGCCTCGAAGAACGCCTTT CAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTCGGATTCCCGGACAA GATCGGCCGCGTATAAGAAACCACCCCAATATTCCCACCCTTCCCGACGG TTCCCGCGACCTGCACCTCAACCACTCCCATATCAACACTTGGAAGGATA TGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGGCCATTGGTGTTTGCAAC TACAGCAGGCCCTACCTTGAGGAGCTCCTCGCCCAAGCCACCGTGGTCCC GGCTGTCAACCAGATTGAGAACCACCCCTGCCTTCCCCAGCAGGAGGCGG TCGACTTCTGCAAGGAGAAGGGCATTCACATCACGGCATACAGCCCTCTC GGCAGCACGGGCAGTCCGCTGCTGACAGCAGAGCCCATTGTCGAGGTTGC GAAGAAGAAGGGTGTCGACCCAGCCACGGTCCTGCTGAGCTGGCACAGAA CCTGGCAGTCAGGCCCTGGAGAGGTCGAAAAGGCCGTGGCACATGCCATC TCCGTTGGATACAGACACATTGATACCGCTTTTGCTTACGGAAACGAAGG AGAAGTCGGCAAGGGTATCAAGGCAGCCATCGAGTCTGGAGTTGTCAAGC GAGAGGACCTCTTTGTCACAACTAAGCTCTGGAGCACATGGCACTACCGA GTGGAACAGGCTCTGGACCAGAGCTTGAAGAACTTGGGGCTGGACTATGT TGATCTCTACCTGGTCCACTGGCCGGTGGCTATGAACCCTAATGATGGGT TCGACTTCGACCGTCGCAGACACCCGCTTCAAGCTGAACACCGGGGCTGA GATCCCTGCTCTCGGACTCGTCAGCCGTGGCTCTTCCGTCCTTGCCAAGT CTGTGAACCCCTCTCGGATTGAGGGCAACCGCAACCTGGTGGCATTGGAT GATGCTGATATGGCTACCATTGCCAAATACACGAATGACCTGGCCTCGAA GAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTTGACTTCGGAT TCCCGGACAAGATCGGCCGCGTATAAGAAACCACCCCAATATTCCCACCC TTCCCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCATATCAACACT TGGAAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCAAGGCCATTGG TGTTTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTCGCCCAAGCCA CCGTGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTGCCTTCCCCAG CAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACATCACGGCATA CAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACAGCAGAGCCCATTG TCGAGGTTGCGAAGAAGAAGGGTGTCGACCCAGCCACGGTCCTGCTGAGC TGGCACAGAACCTGGCAGTCAGGCCCTGGAGAGGTCGAAAAGGCCGTGGC ACATGCCATCTCCGTTGGATACAGACACATTGATACCGCTTTTGCTTACG GAAACGAAGGAGAAGTCGGCAAGGGTATCAAGGCAGCCATCGAGTCTGGA GTTGTCAAGCGAGAGGACCTCTTTGTCACAACTAAGCTCTGGAGCACATG GCACTACCGAGTGGAACAGGCTCTGGACCAGAGCTTGAAGAACTTGGGGC TGGACTATGTTGATCTCTACCTGGTCCACTGGCCGGTGGCTATGAACCCT AATGATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTCAAGCTGAACA CCGGGGCTGAGATCCCTGCTCTCGGACTCGTCAGCCGTGGCTCTTCCGTC CTTGCCAAGTCTGTGAACCCCTCTCGGATTGAGGGCAACCGCAACCTGGT GGCATTGGATGATGCTGATATGGCTACCATTGCCAAATACACGAATGACC TGGCCTCGAAGAACGCCTTTCAGCGTTTTGTTTTCCCTCCTTTCAAGCTT GACTTCGGATTCCCGGACAAGATCGGCCGCGTATAAGAAACCACCCCAAT ATTCCCACCCTTCCCGACGGTTCCCGCGACCTGCACCTCAACCACTCCCA TATCAACACTTGGAAGGATATGGAGAAGCTTGTCGGTAGCGGAAAGACCA AGGCCATTGGTGTTTGCAACTACAGCAGGCCCTACCTTGAGGAGCTCCTC GCCCAAGCCACCGTGGTCCCGGCTGTCAACCAGATTGAGAACCACCCCTG CCTTCCCCAGCAGGAGGCGGTCGACTTCTGCAAGGAGAAGGGCATTCACA TCACGGCATACAGCCCTCTCGGCAGCACGGGCAGTCCGCTGCTGACAGCA GAGCCCATTGTCGAGGTTGCGAAGAAGAAGGGTGTCGACCCAGCCACGGT CCTGCTGAGCTGGCACAGAACCTGGCAGTCAGGCCCTGGAGAGGTCGAAA AGGCCGTGGCACATGCCATCTCCGTTGGATACAGACACATTGATACCGCT TTTGCTTACGGAAACGAAGGAGAAGTCGGCAAGGGTATCAAGGCAGCCAT CGAGTCTGGAGTTGTCAAGCGAGAGGACCTCTTTGTCACAACTAAGCTCT GGAGCACATGGCACTACCGAGTGGAACAGGCTCTGGACCAGAGCTTGAAG AACTTGGGGCTGGACTATGTTGATCTCTACCTGGTCCACTGGCCGGTGGC TATGAACCCTAATGATGGGTTCGACTTCGACCGTCGCAGACACCCGCTTC AAGCTGAACACCGGGGCTGAGATCCCTGCTCTCGGACTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
Term | Definition |
GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
ATCC64974_69290-T1 | ATCC64974_69290-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR018170 |
DBxref | InterPro:IPR023210 |
DBxref | InterPro:IPR036812 |
DBxref | InterPro:IPR020471 |
DBxref | PFAM:PF00248 |
Product | H/ACA snoRNP pseudouridylase subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
OGUI01000010.1 | supercontig | OGUI01000010.1:2077375..2078503 - |
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