You are here

Home

ATCC64974_69570-T1, ATCC64974_69570-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_69570-T1
Unique NameATCC64974_69570-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000010.1:2148828..2149849+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_69570-T1 ID=ATCC64974_69570-T1|Name=ATCC64974_69570-T1|organism=Aspergillus niger N402|type=mRNA|length=1022bp|location=Sequence derived from alignment at OGUI01000010.1:2148828..2149849+ (Aspergillus niger N402)
ATGGACCTCTCCAATCCGCGATGCGAGCATCTGGCCTCGCCTGATATCAA
AAACTTCATCCTCTCCATGTACGTCTTTTACTCTAACCATTATGTATCCT
ACATTATACCGAAGCTAACTGTAATCAGCCTCATCGTCTTCGGAATCCTC
CTTTCCTACACCCCCCAACATGTCCGCATTCTCACCATGAAGACCTCCTT
CGGCATCTCACCGTACTTCGTCCTCCTAGGAACCACATCTGGTTCCTCGG
CACTAGCAAACGTGATCTCCCAACAACAAAGCCTTCACGACATGGCCTGC
TGCAAGCAAGTCAATGGGATGGGCTGTTTCGCAGGAATCCTTGGAATTCT
TCAAGTCGGAACCCAATGCCTTTGCTTCTTCATCATGTAAGAACCCCATC
ATCGTCGTCAAACCATCCCATCCTAAACTAGCCACCAACTAACCCATCCA
GCCTATTCCTCTTCGTCCTCTTCTTCCCCCGGAACACCGCCCACCTCCCC
AAATCCAGCCCAACCTACCGCACCGCCGTAACCGTCGCCGTCATCTGCAT
CCTTCACGCCGCCTTCATGCTTATCACCACTCTCGCCGTCGGCTACACTC
GCCCCTCTTCCCTCCAGGCATGGTCCAACTTCTGCGGCATCCTCTCCGCC
CTCCTCGCCTCAATCCAATACTTCCCCCAGATCTACACGACTCTGCGACT
CCGCTGCGTCGGATCCCTCAGCATCCCCATGATGTGCATCCAAACGCCCG
GCAGTCTCGTCTGGGCGGGCAGTCTCGCAGCGCGATTAGGTCCAAAGGGG
TGGAGTACATGGGGCGTATTGATTGTGACGGCTTGTCTGCAGGGAACGCT
GCTCTGCTTGGGTGTGTTCTTTGAGTTCCTGGGACCAAACCGGGGACATA
GTCATGAAGGGCATGATAAGGATACTGAGGTTGTGAGGGGAGGGGCCGGG
GAAGAGGAGGTGGTGGCTGAGGATGATCAGGACTTGCCGTCGGAGGAGAC
GCCTTTGTTGAGGGATCAGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000010.1:2148828..2149849+

>ATCC64974_69570-T1 ID=ATCC64974_69570-T1|Name=ATCC64974_69570-T1|organism=Aspergillus niger N402|type=CDS|length=2691bp|location=Sequence derived from alignment at OGUI01000010.1:2148828..2149849+ (Aspergillus niger N402)
ATGGACCTCTCCAATCCGCGATGCGAGCATCTGGCCTCGCCTGATATCAA
AAACTTCATCCTCTCCATCCTCATCGTCTTCGGAATCCTCCTTTCCTACA
CCCCCCAACATGTCCGCATTCTCACCATGAAGACCTCCTTCGGCATCTCA
CCGTACTTCGTCCTCCTAGGAACCACATCTGGTTCCTCGGCACTAGCAAA
CGTGATCTCCCAACAACAAAGCCTTCACGACATGGCCTGCTGCAAGCAAG
TCAATGGGATGGGCTGTTTCGCAGGAATCCTTGGAATTCTTCAAGTCGGA
ACCCAATGCCTTTGCTTCTTCATCATCCTATTCCTCTTCGTCCTCTTCTT
CCCCCGGAACACCGCCCACCTCCCCAAATCCAGCCCAACCTACCGCACCG
CCGTAACCGTCGCCGTCATCTGCATCCTTCACGCCGCCTTCATGCTTATC
ACCACTCTCGCCGTCGGCTACACTCGCCCCTCTTCCCTCCAGGCATGGTC
CAACTTCTGCGGCATCCTCTCCGCCCTCCTCGCCTCAATCCAATACTTCC
CCCAGATCTACACGACTCTGCGACTCCGCTGCGTCGGATCCCTCAGCATC
CCCATGATGTGCATCCAAACGCCCGGCAGTCTCGTCTGGGCGGGCAGTCT
CGCAGCGCGATTAGGTCCAAAGGGGTGGAGTACATGGGGCGTATTGATTG
TGACGGCTTGTCTGCAGGGAACGCTGCTCTGCTTGGGTGTGTTCTTTGAG
TTCCTGGGACCAAACCGGGGACATAGTCATGAAGGGCATGATAAGGATAC
TGAGGTTGTGAGGGGAGGGGCCGGGGAAGAGGAGGTGGTGGCTGAGGATG
ATCAGGACTTGCCGTCGGAGGAGACGCCTTTGTTGAGGGATCAGTGAATG
GACCTCTCCAATCCGCGATGCGAGCATCTGGCCTCGCCTGATATCAAAAA
CTTCATCCTCTCCATCCTCATCGTCTTCGGAATCCTCCTTTCCTACACCC
CCCAACATGTCCGCATTCTCACCATGAAGACCTCCTTCGGCATCTCACCG
TACTTCGTCCTCCTAGGAACCACATCTGGTTCCTCGGCACTAGCAAACGT
GATCTCCCAACAACAAAGCCTTCACGACATGGCCTGCTGCAAGCAAGTCA
ATGGGATGGGCTGTTTCGCAGGAATCCTTGGAATTCTTCAAGTCGGAACC
CAATGCCTTTGCTTCTTCATCATCCTATTCCTCTTCGTCCTCTTCTTCCC
CCGGAACACCGCCCACCTCCCCAAATCCAGCCCAACCTACCGCACCGCCG
TAACCGTCGCCGTCATCTGCATCCTTCACGCCGCCTTCATGCTTATCACC
ACTCTCGCCGTCGGCTACACTCGCCCCTCTTCCCTCCAGGCATGGTCCAA
CTTCTGCGGCATCCTCTCCGCCCTCCTCGCCTCAATCCAATACTTCCCCC
AGATCTACACGACTCTGCGACTCCGCTGCGTCGGATCCCTCAGCATCCCC
ATGATGTGCATCCAAACGCCCGGCAGTCTCGTCTGGGCGGGCAGTCTCGC
AGCGCGATTAGGTCCAAAGGGGTGGAGTACATGGGGCGTATTGATTGTGA
CGGCTTGTCTGCAGGGAACGCTGCTCTGCTTGGGTGTGTTCTTTGAGTTC
CTGGGACCAAACCGGGGACATAGTCATGAAGGGCATGATAAGGATACTGA
GGTTGTGAGGGGAGGGGCCGGGGAAGAGGAGGTGGTGGCTGAGGATGATC
AGGACTTGCCGTCGGAGGAGACGCCTTTGTTGAGGGATCAGTGAATGGAC
CTCTCCAATCCGCGATGCGAGCATCTGGCCTCGCCTGATATCAAAAACTT
CATCCTCTCCATCCTCATCGTCTTCGGAATCCTCCTTTCCTACACCCCCC
AACATGTCCGCATTCTCACCATGAAGACCTCCTTCGGCATCTCACCGTAC
TTCGTCCTCCTAGGAACCACATCTGGTTCCTCGGCACTAGCAAACGTGAT
CTCCCAACAACAAAGCCTTCACGACATGGCCTGCTGCAAGCAAGTCAATG
GGATGGGCTGTTTCGCAGGAATCCTTGGAATTCTTCAAGTCGGAACCCAA
TGCCTTTGCTTCTTCATCATCCTATTCCTCTTCGTCCTCTTCTTCCCCCG
GAACACCGCCCACCTCCCCAAATCCAGCCCAACCTACCGCACCGCCGTAA
CCGTCGCCGTCATCTGCATCCTTCACGCCGCCTTCATGCTTATCACCACT
CTCGCCGTCGGCTACACTCGCCCCTCTTCCCTCCAGGCATGGTCCAACTT
CTGCGGCATCCTCTCCGCCCTCCTCGCCTCAATCCAATACTTCCCCCAGA
TCTACACGACTCTGCGACTCCGCTGCGTCGGATCCCTCAGCATCCCCATG
ATGTGCATCCAAACGCCCGGCAGTCTCGTCTGGGCGGGCAGTCTCGCAGC
GCGATTAGGTCCAAAGGGGTGGAGTACATGGGGCGTATTGATTGTGACGG
CTTGTCTGCAGGGAACGCTGCTCTGCTTGGGTGTGTTCTTTGAGTTCCTG
GGACCAAACCGGGGACATAGTCATGAAGGGCATGATAAGGATACTGAGGT
TGTGAGGGGAGGGGCCGGGGAAGAGGAGGTGGTGGCTGAGGATGATCAGG
ACTTGCCGTCGGAGGAGACGCCTTTGTTGAGGGATCAGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_69570ATCC64974_69570Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69570-T1.exon1ATCC64974_69570-T1.exon1Aspergillus niger N402exon
ATCC64974_69570-T1.exon2ATCC64974_69570-T1.exon2Aspergillus niger N402exon
ATCC64974_69570-T1.exon3ATCC64974_69570-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69570-T1.cdsATCC64974_69570-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_69570-T1ATCC64974_69570-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR006603
DBxrefPFAM:PF04193
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000010.1supercontigOGUI01000010.1:2148828..2149849 +
Powered by Drupal