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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000010.1:2209675..2210916- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_69780-T1 ID=ATCC64974_69780-T1|Name=ATCC64974_69780-T1|organism=Aspergillus niger N402|type=mRNA|length=1242bp|location=Sequence derived from alignment at OGUI01000010.1:2209675..2210916- (Aspergillus niger N402)
ATGCGAACCCGCTCCAGCGCTCCATCGGAGCAACCCCAATCTCCTCCATC
CACCTCCGATCACCAAACAACAGCAGCATCTACATCAGCTCTCCCAGCGC
AATCCACCCCCCAGAAAACCTTCATCCTCCCCTCCACTGCCGGCGCCGAC
GCCCGCTTCCTCACCCTTCCCAACCCGCGAACCGCCTCGCCAACCCGCTA
CTTCTTCGACCCCAAACTAGGCGTATACGAATTCACCGTCCTCTCATCCC
CTCCCACCGCACCGCGAAGCACCCTTCTCGTGCGCAACCCCTATCCCACC
TCATCATCCACATCCCAACCGCCAGCGCACATCTCCAAGAAAGCCGAACT
CCTCCTTGCCACCCCCATCGACATCCTCTTCTTTCTCATTCCCATCCTCA
CCGCAAACACCAAACAAAACAACCTCTTCCAACCCCTAGACGACATCATC
GACTCGCTGGACGAGGAGCTCCTCCCACCTCACCTCCGCCATGTACTCTA
CGACGAAACCTTCCGCGGGACACTGCACGCCCGCGCCGCTGCGATAAGCG
ACTCCGTTGAAGCTGGCGACGAGAAGATGTTCCGGTTTAACGAGACGAAA
CTCCTCCAGGAACTTGTCGCCAAGGCGGATAGAATGGTTAGCGTGGGGCT
GCCTCCGAGTCTTGAGGAGAGATTTGTGAGACAGGCGCTGGCGACGCCGC
TGATGGCGGTGAAAAGAGATGATGTGGTGGCTACGGGGGAGAATAAGGAG
AATGAGGGCGAAGATGGCAAAGAGGAGGGGGAGAAGACCACCGCGGATAA
TGAAGATGCAAAGGAGCACCTCCCCGAAGGCTTGAAAGCTCCTGACGGCG
TAGCAAACCTCCTCCGGATATCCACAGCGCTGGCATTCATAAAAGAGTGC
TATTTATCCAGAGAGATGAGTGCGCGGATAGATGAGTTACTAGCTGCGCC
GGAGAGTCCGAAGGATTTTAAGCCGATGCGGGATCATTTGGACCTTGTGG
CGAAGCTGAGGGCGGAGGCGCTGGCGACGAGATCGCTGGGGGATTTCTCG
CGGAAGAGGAGTGTTGAAGATCAGGAGGCTGCGGAGTCGAGGGCGGAGAA
GAAGCGGAGGATGGAGGAAGAAGAGAAGAAGAAGAAGGCGAATGAGTCGA
GGGGGGTCCGGGATCTCAAAAAGGTTAATACGACGGGAATGAAGAAGATG
AGTGATTTCTTTGGAAAGGCGGCTGCGAAGAAGAAGACTTGA back to topCoding sequence (CDS) from alignment at OGUI01000010.1:2209675..2210916- >ATCC64974_69780-T1 ID=ATCC64974_69780-T1|Name=ATCC64974_69780-T1|organism=Aspergillus niger N402|type=CDS|length=1242bp|location=Sequence derived from alignment at OGUI01000010.1:2209675..2210916- (Aspergillus niger N402)
ATGCGAACCCGCTCCAGCGCTCCATCGGAGCAACCCCAATCTCCTCCATC
CACCTCCGATCACCAAACAACAGCAGCATCTACATCAGCTCTCCCAGCGC
AATCCACCCCCCAGAAAACCTTCATCCTCCCCTCCACTGCCGGCGCCGAC
GCCCGCTTCCTCACCCTTCCCAACCCGCGAACCGCCTCGCCAACCCGCTA
CTTCTTCGACCCCAAACTAGGCGTATACGAATTCACCGTCCTCTCATCCC
CTCCCACCGCACCGCGAAGCACCCTTCTCGTGCGCAACCCCTATCCCACC
TCATCATCCACATCCCAACCGCCAGCGCACATCTCCAAGAAAGCCGAACT
CCTCCTTGCCACCCCCATCGACATCCTCTTCTTTCTCATTCCCATCCTCA
CCGCAAACACCAAACAAAACAACCTCTTCCAACCCCTAGACGACATCATC
GACTCGCTGGACGAGGAGCTCCTCCCACCTCACCTCCGCCATGTACTCTA
CGACGAAACCTTCCGCGGGACACTGCACGCCCGCGCCGCTGCGATAAGCG
ACTCCGTTGAAGCTGGCGACGAGAAGATGTTCCGGTTTAACGAGACGAAA
CTCCTCCAGGAACTTGTCGCCAAGGCGGATAGAATGGTTAGCGTGGGGCT
GCCTCCGAGTCTTGAGGAGAGATTTGTGAGACAGGCGCTGGCGACGCCGC
TGATGGCGGTGAAAAGAGATGATGTGGTGGCTACGGGGGAGAATAAGGAG
AATGAGGGCGAAGATGGCAAAGAGGAGGGGGAGAAGACCACCGCGGATAA
TGAAGATGCAAAGGAGCACCTCCCCGAAGGCTTGAAAGCTCCTGACGGCG
TAGCAAACCTCCTCCGGATATCCACAGCGCTGGCATTCATAAAAGAGTGC
TATTTATCCAGAGAGATGAGTGCGCGGATAGATGAGTTACTAGCTGCGCC
GGAGAGTCCGAAGGATTTTAAGCCGATGCGGGATCATTTGGACCTTGTGG
CGAAGCTGAGGGCGGAGGCGCTGGCGACGAGATCGCTGGGGGATTTCTCG
CGGAAGAGGAGTGTTGAAGATCAGGAGGCTGCGGAGTCGAGGGCGGAGAA
GAAGCGGAGGATGGAGGAAGAAGAGAAGAAGAAGAAGGCGAATGAGTCGA
GGGGGGTCCGGGATCTCAAAAAGGTTAATACGACGGGAATGAAGAAGATG
AGTGATTTCTTTGGAAAGGCGGCTGCGAAGAAGAAGACTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0032299 | ribonuclease H2 complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_69780-T1 | ATCC64974_69780-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR040456 |
| DBxref | InterPro:IPR019024 |
| DBxref | InterPro:IPR041195 |
| DBxref | PFAM:PF17745 |
| DBxref | PFAM:PF09468 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000010.1 | supercontig | OGUI01000010.1:2209675..2210916 - |
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