You are here

Home

ATCC64974_71500-T1, ATCC64974_71500-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_71500-T1
Unique NameATCC64974_71500-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000011.1:27437..28557+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_71500-T1 ID=ATCC64974_71500-T1|Name=ATCC64974_71500-T1|organism=Aspergillus niger N402|type=mRNA|length=1121bp|location=Sequence derived from alignment at OGUI01000011.1:27437..28557+ (Aspergillus niger N402)
ATGGCTCAGTCAAAAACTCTCCTTGGTCCCTACGAGTCTAATCCAGCAAA
CCCGGTATTAACCGCAGCAAACACGACGCGATTCTGTAAGTTCTACAAAA
TTTCTGCCAGCCAGATCACCACTCATCTCTGTGTGCCAGTCCAGACCATC
GGTCATGCAGACCTATTCCAGGATGCCTTGGACAACTGGTATTTCCCGCC
GAATGGATGGTTCTCTGTCACTCACTAATCTCAACACCCAGGTGGGCTGT
GGCTCTCGCCACACGAGAGGATACTACGCACGACTATCATCCGATGGGAC
GGGAGACCGTGCTGACCCCAGTGACGTGGGAGACTGGCGAATGGCCTGTG
TTCAGCATTGTGGAGGGCGAGATGGAGGGTTGGGCGCGTCCGCCGGCCGG
GTCAATAGCAGGAGACGGGTAGGTACAAATCCAGACCATTAGCAGTCCTA
ACCTCTCCTATGCAGACCATGGATCACCGACGGCTATGCAATGGACTTCG
CTCCTGGATCCTCCCTCCCTCTGCAACTCACCCACTGGCGATTCCCTGCG
AACGCCTCCTACGAGATCTCCCCGGCGGAGCACCCCTACACCCTGAAGCT
GAACCCTTCGAGCGCGAACCTAACCTATGACCTTAAGTCCGCGCCCCCAG
GGGGCCAAGCCTTCCTCGGACAACGTCAGCAGCAGTACTTATAGCGTCAA
CATGGACTACATGCCGACGACAGTCAATGAGGAGGCCGGGGTAACAAGTT
TCCTGCAGCAAAACAAGCACGTCGAACTAGGGGTTGTGCTACTCCAGGCC
AACGAGCCCTACCTTCGGGTGCGCGGCGTCTCCACAGTCACCCTACCTAG
CTACCAGACCGCGCTGCCCGCTGCCTGGGCCAACACTACCCTGCACCTTG
AGATCAAGGCCCTGAACTGGACCCACTACGCTCTCTCCATTGGGCCTGCC
GCTTCCATGTCCAGCATGAAGACTCTGGCCTATCCGATCAACTCTGCCCT
GGGTGGGGGTTTCACAGGCACTTTCGTCGGAGTCTATGCAACTAGTAATG
GGGGGGATGGGTCCACACCTGCATATTTCTCTAATTGGACATATCTCCCG
CAGGGACAGTTCATCAATTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000011.1:27437..28557+

>ATCC64974_71500-T1 ID=ATCC64974_71500-T1|Name=ATCC64974_71500-T1|organism=Aspergillus niger N402|type=CDS|length=3888bp|location=Sequence derived from alignment at OGUI01000011.1:27437..28557+ (Aspergillus niger N402)
ATGGCTCAGTCAAAAACTCTCCTTGGTCCCTACGAGTCTAATCCAGCAAA
CCCGGTATTAACCGCAGCAAACACGACGCGATTCTGTAAGTTCTACAAAA
TTTCTGCCAGCCAGATCACCACTCATCTCTGTGTGCCAGTCCAGACCATC
GGTCATGCAGACCTATTCCAGGATGCCTTGGACAACTGGTGGGCTGTGGC
TCTCGCCACACGAGAGGATACTACGCACGACTATCATCCGATGGGACGGG
AGACCGTGCTGACCCCAGTGACGTGGGAGACTGGCGAATGGCCTGTGTTC
AGCATTGTGGAGGGCGAGATGGAGGGTTGGGCGCGTCCGCCGGCCGGGTC
AATAGCAGGAGACGGACCATGGATCACCGACGGCTATGCAATGGACTTCG
CTCCTGGATCCTCCCTCCCTCTGCAACTCACCCACTGGCGATTCCCTGCG
AACGCCTCCTACGAGATCTCCCCGGCGGAGCACCCCTACACCCTGAAGCT
GAACCCTTCGAGCGCGAACCTAACCTATGACCTTAAGTCCGCGCCCCCAG
GGGGCCAAGCCTTCCTCGGACAACTCAATGAGGAGGCCGGGGTAACAAGT
TTCCTGCAGCAAAACAAGCACGTCGAACTAGGGGTTGTGCTACTCCAGGC
CAACGAGCCCTACCTTCGGGTGCGCGGCGTCTCCACAGTCACCCTACCTA
GCTACCAGACCGCGCTGCCCGCTGCCTGGGCCAACACTACCCTGCACCTT
GAGATCAAGGCCCTGAACTGGACCCACTACGCTCTCTCCATTGGGCCTGC
CGCTTCCATGTCCAGCATGAAGACTCTGGCCTATCCGATCAACTCTGCCC
TGGGTGGGGGTTTCACAGGCACTTTCGTCGGAGTCTATGCAACTAGTAAT
GGGGGGGATGGGTCCACACCTGCATATTTCTCTAATTGGACATATCTCCC
GCAGGGACAGTTCATCAATTGAATGGCTCAGTCAAAAACTCTCCTTGGTC
CCTACGAGTCTAATCCAGCAAACCCGGTATTAACCGCAGCAAACACGACG
CGATTCTGTAAGTTCTACAAAATTTCTGCCAGCCAGATCACCACTCATCT
CTGTGTGCCAGTCCAGACCATCGGTCATGCAGACCTATTCCAGGATGCCT
TGGACAACTGGTGGGCTGTGGCTCTCGCCACACGAGAGGATACTACGCAC
GACTATCATCCGATGGGACGGGAGACCGTGCTGACCCCAGTGACGTGGGA
GACTGGCGAATGGCCTGTGTTCAGCATTGTGGAGGGCGAGATGGAGGGTT
GGGCGCGTCCGCCGGCCGGGTCAATAGCAGGAGACGGACCATGGATCACC
GACGGCTATGCAATGGACTTCGCTCCTGGATCCTCCCTCCCTCTGCAACT
CACCCACTGGCGATTCCCTGCGAACGCCTCCTACGAGATCTCCCCGGCGG
AGCACCCCTACACCCTGAAGCTGAACCCTTCGAGCGCGAACCTAACCTAT
GACCTTAAGTCCGCGCCCCCAGGGGGCCAAGCCTTCCTCGGACAACTCAA
TGAGGAGGCCGGGGTAACAAGTTTCCTGCAGCAAAACAAGCACGTCGAAC
TAGGGGTTGTGCTACTCCAGGCCAACGAGCCCTACCTTCGGGTGCGCGGC
GTCTCCACAGTCACCCTACCTAGCTACCAGACCGCGCTGCCCGCTGCCTG
GGCCAACACTACCCTGCACCTTGAGATCAAGGCCCTGAACTGGACCCACT
ACGCTCTCTCCATTGGGCCTGCCGCTTCCATGTCCAGCATGAAGACTCTG
GCCTATCCGATCAACTCTGCCCTGGGTGGGGGTTTCACAGGCACTTTCGT
CGGAGTCTATGCAACTAGTAATGGGGGGGATGGGTCCACACCTGCATATT
TCTCTAATTGGACATATCTCCCGCAGGGACAGTTCATCAATTGAATGGCT
CAGTCAAAAACTCTCCTTGGTCCCTACGAGTCTAATCCAGCAAACCCGGT
ATTAACCGCAGCAAACACGACGCGATTCTGTAAGTTCTACAAAATTTCTG
CCAGCCAGATCACCACTCATCTCTGTGTGCCAGTCCAGACCATCGGTCAT
GCAGACCTATTCCAGGATGCCTTGGACAACTGGTGGGCTGTGGCTCTCGC
CACACGAGAGGATACTACGCACGACTATCATCCGATGGGACGGGAGACCG
TGCTGACCCCAGTGACGTGGGAGACTGGCGAATGGCCTGTGTTCAGCATT
GTGGAGGGCGAGATGGAGGGTTGGGCGCGTCCGCCGGCCGGGTCAATAGC
AGGAGACGGACCATGGATCACCGACGGCTATGCAATGGACTTCGCTCCTG
GATCCTCCCTCCCTCTGCAACTCACCCACTGGCGATTCCCTGCGAACGCC
TCCTACGAGATCTCCCCGGCGGAGCACCCCTACACCCTGAAGCTGAACCC
TTCGAGCGCGAACCTAACCTATGACCTTAAGTCCGCGCCCCCAGGGGGCC
AAGCCTTCCTCGGACAACTCAATGAGGAGGCCGGGGTAACAAGTTTCCTG
CAGCAAAACAAGCACGTCGAACTAGGGGTTGTGCTACTCCAGGCCAACGA
GCCCTACCTTCGGGTGCGCGGCGTCTCCACAGTCACCCTACCTAGCTACC
AGACCGCGCTGCCCGCTGCCTGGGCCAACACTACCCTGCACCTTGAGATC
AAGGCCCTGAACTGGACCCACTACGCTCTCTCCATTGGGCCTGCCGCTTC
CATGTCCAGCATGAAGACTCTGGCCTATCCGATCAACTCTGCCCTGGGTG
GGGGTTTCACAGGCACTTTCGTCGGAGTCTATGCAACTAGTAATGGGGGG
GATGGGTCCACACCTGCATATTTCTCTAATTGGACATATCTCCCGCAGGG
ACAGTTCATCAATTGAATGGCTCAGTCAAAAACTCTCCTTGGTCCCTACG
AGTCTAATCCAGCAAACCCGGTATTAACCGCAGCAAACACGACGCGATTC
TGTAAGTTCTACAAAATTTCTGCCAGCCAGATCACCACTCATCTCTGTGT
GCCAGTCCAGACCATCGGTCATGCAGACCTATTCCAGGATGCCTTGGACA
ACTGGTGGGCTGTGGCTCTCGCCACACGAGAGGATACTACGCACGACTAT
CATCCGATGGGACGGGAGACCGTGCTGACCCCAGTGACGTGGGAGACTGG
CGAATGGCCTGTGTTCAGCATTGTGGAGGGCGAGATGGAGGGTTGGGCGC
GTCCGCCGGCCGGGTCAATAGCAGGAGACGGACCATGGATCACCGACGGC
TATGCAATGGACTTCGCTCCTGGATCCTCCCTCCCTCTGCAACTCACCCA
CTGGCGATTCCCTGCGAACGCCTCCTACGAGATCTCCCCGGCGGAGCACC
CCTACACCCTGAAGCTGAACCCTTCGAGCGCGAACCTAACCTATGACCTT
AAGTCCGCGCCCCCAGGGGGCCAAGCCTTCCTCGGACAACTCAATGAGGA
GGCCGGGGTAACAAGTTTCCTGCAGCAAAACAAGCACGTCGAACTAGGGG
TTGTGCTACTCCAGGCCAACGAGCCCTACCTTCGGGTGCGCGGCGTCTCC
ACAGTCACCCTACCTAGCTACCAGACCGCGCTGCCCGCTGCCTGGGCCAA
CACTACCCTGCACCTTGAGATCAAGGCCCTGAACTGGACCCACTACGCTC
TCTCCATTGGGCCTGCCGCTTCCATGTCCAGCATGAAGACTCTGGCCTAT
CCGATCAACTCTGCCCTGGGTGGGGGTTTCACAGGCACTTTCGTCGGAGT
CTATGCAACTAGTAATGGGGGGGATGGGTCCACACCTGCATATTTCTCTA
ATTGGACATATCTCCCGCAGGGACAGTTCATCAATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_71500ATCC64974_71500Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_71500-T1.exon1ATCC64974_71500-T1.exon1Aspergillus niger N402exon
ATCC64974_71500-T1.exon2ATCC64974_71500-T1.exon2Aspergillus niger N402exon
ATCC64974_71500-T1.exon3ATCC64974_71500-T1.exon3Aspergillus niger N402exon
ATCC64974_71500-T1.exon4ATCC64974_71500-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_71500-T1.cdsATCC64974_71500-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_71500-T1ATCC64974_71500-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR041542
DBxrefInterPro:IPR006710
DBxrefInterPro:IPR023296
DBxrefPFAM:PF17851
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000011.1supercontigOGUI01000011.1:27437..28557 +
Powered by Drupal