You are here

Home

ATCC64974_77030-T1, ATCC64974_77030-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_77030-T1
Unique NameATCC64974_77030-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:1110075..1112420+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_77030-T1 ID=ATCC64974_77030-T1|Name=ATCC64974_77030-T1|organism=Aspergillus niger N402|type=mRNA|length=2346bp|location=Sequence derived from alignment at OGUI01000013.1:1110075..1112420+ (Aspergillus niger N402)
ATGCCCGTGCGCGTAAAAAGCCGAGCCTTGGCTCTTCAAAGACCGGATGA
GCTGGAGCGGCAGTGGGATGAATTGAGGCACTTTTTGGTGTCGTTCATGG
TTGCAAACGACAGGGTGGCTAAGCTAGTGATCCTAGACGCTCATAGAGAC
AAAAAGATTACAGTTTGCCCCCAGGGACTTGCAAGACAATATGGCGGGGA
GCCTGATCTACAGCGACTGCGTTCCATCCTGGCACAGTCGGGGCTTGTCG
GGGCTCAGAATACGGGCATATGGGATACCGTATCAGCCAGCGTTTCCGAC
TTCACGATTCATGCAGCAGTCTCTTTGACGCCTAGTCCTACGAAGAAGGT
CCAGTTCGTCTCTTTAGGCTCGACCCCGGTGTTCGCGAGGAGCAACGCGA
ATCTGATCTATGCGGAAGTCAATCGCTCATTTGCCTTGTCGGACTTTGGG
TCTATGAAAAACTGCTCCTCTGCAGTTGAAGCGCCCGTCCGGGCTGCTGA
TGGCCAACTCATGCATAGCAAACCTGCGTCTAAAGCAGTCAATAAATGGC
CAATGTTCTATATACGTATAGACAGCTGCAATGAGTGGAGTATCGACGAC
GACACGCAAGAACTTCCGGAATCAGACAAGTCCCTCCAACGTATCATAGA
TGTGCTTTCGACAATGATCAACGAATTTCTCAGGCAAAGCAGCTTACGCC
CACGGACTGGGAAAAGGAAAAGAAGTACGCCCAATGTACCACCAGCTACT
ACGCGCCATAGCAGCGTGAAGGCCGGAAGGTCTCTATCTCCAGGAGGTGA
AGTCTCCGCCACCGAAGAAACTCTCGGCAATCAGCTCAGGCTCCCCTCTT
TGCGAAGACCACCCAATGTCAGTCATCACTTCGGAGATTGGACCAGGATA
AAAAGTGCGAAGCCGGAAACGGTTAGCAAGAGGTTTCCTTTACGCGGTCG
CGAACCCAGGTCAACTCGCTCAGAGAATTACCCAGCACATCAAGTCCAGG
ATCATTTGAACCAGCAACCAGCGCTCCTATCTGCAAGCAATGAAGGCACG
GCCACTGAGCCCCGATCTCCTGTACTGGAAGAACCAGAGAAGCACGAAGA
GCAACTTAATCAGATTCATGAAGAGACAGCTACCGACAGAATGACGCCAT
GGGTCGATCCTTACACGGGTAGACGCCACTTAATCAACTCGCGCACTGGT
CAGTCCATACTCCATGGGTCTTCAGTAGCAGCGGACGTGGCGCTGCGGCC
CCGGTCCACTGGGTGTCTACCAGAACCACATCGCGCTCCAGATGAAGTGC
AGCGACCAAGATCGGTCGATCTGCAGAGGACCGACAACAAGTGGGTTGAG
AAACTTTTGGACAATTGGATTAACCCTGTTTTTGGTCGCCCAGAGAGGCC
TATCAGTGCGATGGATGTCAGTGCTGGCCACGAGACAGCTCGCCCCGGGT
CTAGCTCGCGGAACAATCAGGGCGAGCTATGCGGTTTCGAAAGCATGGGA
GTGTCGAAGTTTCGCGGCAAACTGCGCAAACAGGATTTAAGAGCTGCAGA
AATTATCGCCCAAGTGGATCAGAAATTCATCCTGGTAAAGATGCAATTGC
CCTCCAATAGCCCTGGGGAGCCTGCATCAAACCTGATCTTGATCGATCAG
CACGCTGCGGATGAACGCTGCCGGGTCGAGGCACTCATGGCAGAGCTGTT
CACATCAGAAGAAGATAGCCCGGGCTCCATCCAAACCATCACATTGGATC
CCATTATTTTTGAGATACCCGCTACCGAAGCATCCCTATTTGAACGATAT
AGAAATTTCTTCCACTCTTGGGGTGTAGCTTACACCATGGAACAAGGACC
CAAAGACAAGAACGTCTTCATTTTCGTACACACCCTCCCAACCCTCATCG
CCGAGCGCTGCCGCACCGAGCCCAACCTAGTCTCTGACCTCATCCGCGGC
GAGATCTGGAAACGCGAAGAAGAAAACGGCCGAAGCCGACAGCCTCACCA
TCCCACCGGCTTCGGCGCTTCTCGTCCAGATATGGCCCAAACCAGCAGCA
GTTGGGTAGACCGACTCGACGGCTGTCCTCGAGGGATCATCGACCTGCTG
AACTCTCGCGCATGCCGCACGGCAGTCATGTTCAATGATGTTCTGGACAA
GAATGAATGCCAGAGTTTGGTCCGACGACTCGCAGATTGCGTTTTCCCTT
TCCAGTGCGCGCACGGCCGGCCCTCGATGATACCTATTTTGGAAATGGGG
GCTGCTGTATCATTGGATCAGACTCAGTCGGATGAATATGAAGGTCCTGG
TTTTGTTGGCATGTTTAGGAAATGGCAGGATGCGAAGACTGGTTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:1110075..1112420+

>ATCC64974_77030-T1 ID=ATCC64974_77030-T1|Name=ATCC64974_77030-T1|organism=Aspergillus niger N402|type=CDS|length=2346bp|location=Sequence derived from alignment at OGUI01000013.1:1110075..1112420+ (Aspergillus niger N402)
ATGCCCGTGCGCGTAAAAAGCCGAGCCTTGGCTCTTCAAAGACCGGATGA
GCTGGAGCGGCAGTGGGATGAATTGAGGCACTTTTTGGTGTCGTTCATGG
TTGCAAACGACAGGGTGGCTAAGCTAGTGATCCTAGACGCTCATAGAGAC
AAAAAGATTACAGTTTGCCCCCAGGGACTTGCAAGACAATATGGCGGGGA
GCCTGATCTACAGCGACTGCGTTCCATCCTGGCACAGTCGGGGCTTGTCG
GGGCTCAGAATACGGGCATATGGGATACCGTATCAGCCAGCGTTTCCGAC
TTCACGATTCATGCAGCAGTCTCTTTGACGCCTAGTCCTACGAAGAAGGT
CCAGTTCGTCTCTTTAGGCTCGACCCCGGTGTTCGCGAGGAGCAACGCGA
ATCTGATCTATGCGGAAGTCAATCGCTCATTTGCCTTGTCGGACTTTGGG
TCTATGAAAAACTGCTCCTCTGCAGTTGAAGCGCCCGTCCGGGCTGCTGA
TGGCCAACTCATGCATAGCAAACCTGCGTCTAAAGCAGTCAATAAATGGC
CAATGTTCTATATACGTATAGACAGCTGCAATGAGTGGAGTATCGACGAC
GACACGCAAGAACTTCCGGAATCAGACAAGTCCCTCCAACGTATCATAGA
TGTGCTTTCGACAATGATCAACGAATTTCTCAGGCAAAGCAGCTTACGCC
CACGGACTGGGAAAAGGAAAAGAAGTACGCCCAATGTACCACCAGCTACT
ACGCGCCATAGCAGCGTGAAGGCCGGAAGGTCTCTATCTCCAGGAGGTGA
AGTCTCCGCCACCGAAGAAACTCTCGGCAATCAGCTCAGGCTCCCCTCTT
TGCGAAGACCACCCAATGTCAGTCATCACTTCGGAGATTGGACCAGGATA
AAAAGTGCGAAGCCGGAAACGGTTAGCAAGAGGTTTCCTTTACGCGGTCG
CGAACCCAGGTCAACTCGCTCAGAGAATTACCCAGCACATCAAGTCCAGG
ATCATTTGAACCAGCAACCAGCGCTCCTATCTGCAAGCAATGAAGGCACG
GCCACTGAGCCCCGATCTCCTGTACTGGAAGAACCAGAGAAGCACGAAGA
GCAACTTAATCAGATTCATGAAGAGACAGCTACCGACAGAATGACGCCAT
GGGTCGATCCTTACACGGGTAGACGCCACTTAATCAACTCGCGCACTGGT
CAGTCCATACTCCATGGGTCTTCAGTAGCAGCGGACGTGGCGCTGCGGCC
CCGGTCCACTGGGTGTCTACCAGAACCACATCGCGCTCCAGATGAAGTGC
AGCGACCAAGATCGGTCGATCTGCAGAGGACCGACAACAAGTGGGTTGAG
AAACTTTTGGACAATTGGATTAACCCTGTTTTTGGTCGCCCAGAGAGGCC
TATCAGTGCGATGGATGTCAGTGCTGGCCACGAGACAGCTCGCCCCGGGT
CTAGCTCGCGGAACAATCAGGGCGAGCTATGCGGTTTCGAAAGCATGGGA
GTGTCGAAGTTTCGCGGCAAACTGCGCAAACAGGATTTAAGAGCTGCAGA
AATTATCGCCCAAGTGGATCAGAAATTCATCCTGGTAAAGATGCAATTGC
CCTCCAATAGCCCTGGGGAGCCTGCATCAAACCTGATCTTGATCGATCAG
CACGCTGCGGATGAACGCTGCCGGGTCGAGGCACTCATGGCAGAGCTGTT
CACATCAGAAGAAGATAGCCCGGGCTCCATCCAAACCATCACATTGGATC
CCATTATTTTTGAGATACCCGCTACCGAAGCATCCCTATTTGAACGATAT
AGAAATTTCTTCCACTCTTGGGGTGTAGCTTACACCATGGAACAAGGACC
CAAAGACAAGAACGTCTTCATTTTCGTACACACCCTCCCAACCCTCATCG
CCGAGCGCTGCCGCACCGAGCCCAACCTAGTCTCTGACCTCATCCGCGGC
GAGATCTGGAAACGCGAAGAAGAAAACGGCCGAAGCCGACAGCCTCACCA
TCCCACCGGCTTCGGCGCTTCTCGTCCAGATATGGCCCAAACCAGCAGCA
GTTGGGTAGACCGACTCGACGGCTGTCCTCGAGGGATCATCGACCTGCTG
AACTCTCGCGCATGCCGCACGGCAGTCATGTTCAATGATGTTCTGGACAA
GAATGAATGCCAGAGTTTGGTCCGACGACTCGCAGATTGCGTTTTCCCTT
TCCAGTGCGCGCACGGCCGGCCCTCGATGATACCTATTTTGGAAATGGGG
GCTGCTGTATCATTGGATCAGACTCAGTCGGATGAATATGAAGGTCCTGG
TTTTGTTGGCATGTTTAGGAAATGGCAGGATGCGAAGACTGGTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006298mismatch repair
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_77030ATCC64974_77030Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77030-T1.exon1ATCC64974_77030-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77030-T1.cdsATCC64974_77030-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_77030-T1ATCC64974_77030-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR037198
DBxrefInterPro:IPR014790
DBxrefPFAM:PF08676
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:1110075..1112420 +
Powered by Drupal