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ATCC64974_80420-T1, ATCC64974_80420-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_80420-T1
Unique NameATCC64974_80420-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:2178409..2179452+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_80420-T1 ID=ATCC64974_80420-T1|Name=ATCC64974_80420-T1|organism=Aspergillus niger N402|type=mRNA|length=1044bp|location=Sequence derived from alignment at OGUI01000013.1:2178409..2179452+ (Aspergillus niger N402)
ATGGCGCCTGGTGGTGGACGAGATTTTAACTGCACCTGGGAGCATTGCAA
CAAGGTATGGATCGACTCGATGCCGCGTTATCTACACCTTCCGCTGCTCT
ATCGCTTGCTTGAGGGTGTTATAGTTCCTGTGCTAATGGCAGTAGTCCTT
CAATCGCAAATCAGATCTGTGCAGGCACTATCGGATACACACCAATGAGC
GACCGTATCATTGCACGGTCAAGGACTGCAATAAAAGCTTCATTCAACGG
AGTGCATTGACAGTGCATTCGCGAACGCATACCGGAGAGAAGCCTCATGT
CTGTGATCACAGAGGATGCCACAAGGCCTTTTCTGACGTATGTGCATCCT
AGCTCACTAATCTTTATGTATGCTGACCACCACAGTCATCGAGTCTCGCT
CGTCACCGAAGGATCCATACTGGAAAGAGGCCCTATATCTGCCAAGAGCC
AACATGCGAACGAGCGTAAGCATTGGCCTGGTTCTCGTGCTAATCTCTTA
TCTAACAACGTGAAGCTTCTGCCGCAAAACGACCTTGACCAAGCACCAAC
ACCGCTCTCACCCCCCGGGATCCATGACTCGCCTGCCCTCCGAAGATGCG
GTCTCTGAACACTCGTATCAAGGGCCAGTCGCCGTTCCCGTGCCGAATGA
ACAGTATCTCTTAGCCCAGCAACCCTACTACCCTCATACTCCGACGCCGA
CTCATGAGTTTTACCCCCACCAGAGCCTACACATAACGCCGGTGCCCATA
CAAGAACAACCACCGATCGTGACCCAGCACATCCCTGTCACGTCACCGGT
TGATGTGCAGCGTGCTCAGCAACACTACATGCAGCTTGTGCAGCAACAGC
AACAGCAACAGCAGCGGTACGATCCTGGTCGGCAGGGGTATCTGCCACCG
GAGTTTCAGCAACCATACCATGCTCTACCCACAGCGGATGGTCCACCGCT
GATGGTGACTAGCACTCAGAGTGACTACAAACCGCCGGCCCGCATCCTGA
ACCAGCCCGAGGGAACGGACTGGGGCTTCCTGGGGGTTGGCTAA
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Coding sequence (CDS) from alignment at OGUI01000013.1:2178409..2179452+

>ATCC64974_80420-T1 ID=ATCC64974_80420-T1|Name=ATCC64974_80420-T1|organism=Aspergillus niger N402|type=CDS|length=3420bp|location=Sequence derived from alignment at OGUI01000013.1:2178409..2179452+ (Aspergillus niger N402)
ATGGCGCCTGGTGGTGGACGAGATTTTAACTGCACCTGGGAGCATTGCAA
CAAGTCCTTCAATCGCAAATCAGATCTGTGCAGGCACTATCGGATACACA
CCAATGAGCGACCGTATCATTGCACGGTCAAGGACTGCAATAAAAGCTTC
ATTCAACGGAGTGCATTGACAGTGCATTCGCGAACGCATACCGGAGAGAA
GCCTCATGTCTGTGATCACAGAGGATGCCACAAGGCCTTTTCTGACTCAT
CGAGTCTCGCTCGTCACCGAAGGATCCATACTGGAAAGAGGCCCTATATC
TGCCAAGAGCCAACATGCGAACGAGCCTTCTGCCGCAAAACGACCTTGAC
CAAGCACCAACACCGCTCTCACCCCCCGGGATCCATGACTCGCCTGCCCT
CCGAAGATGCGGTCTCTGAACACTCGTATCAAGGGCCAGTCGCCGTTCCC
GTGCCGAATGAACAGTATCTCTTAGCCCAGCAACCCTACTACCCTCATAC
TCCGACGCCGACTCATGAGTTTTACCCCCACCAGAGCCTACACATAACGC
CGGTGCCCATACAAGAACAACCACCGATCGTGACCCAGCACATCCCTGTC
ACGTCACCGGTTGATGTGCAGCGTGCTCAGCAACACTACATGCAGCTTGT
GCAGCAACAGCAACAGCAACAGCAGCGGTACGATCCTGGTCGGCAGGGGT
ATCTGCCACCGGAGTTTCAGCAACCATACCATGCTCTACCCACAGCGGAT
GGTCCACCGCTGATGGTGACTAGCACTCAGAGTGACTACAAACCGCCGGC
CCGCATCCTGAACCAGCCCGAGGGAACGGACTGGGGCTTCCTGGGGGTTG
GCTAAATGGCGCCTGGTGGTGGACGAGATTTTAACTGCACCTGGGAGCAT
TGCAACAAGTCCTTCAATCGCAAATCAGATCTGTGCAGGCACTATCGGAT
ACACACCAATGAGCGACCGTATCATTGCACGGTCAAGGACTGCAATAAAA
GCTTCATTCAACGGAGTGCATTGACAGTGCATTCGCGAACGCATACCGGA
GAGAAGCCTCATGTCTGTGATCACAGAGGATGCCACAAGGCCTTTTCTGA
CTCATCGAGTCTCGCTCGTCACCGAAGGATCCATACTGGAAAGAGGCCCT
ATATCTGCCAAGAGCCAACATGCGAACGAGCCTTCTGCCGCAAAACGACC
TTGACCAAGCACCAACACCGCTCTCACCCCCCGGGATCCATGACTCGCCT
GCCCTCCGAAGATGCGGTCTCTGAACACTCGTATCAAGGGCCAGTCGCCG
TTCCCGTGCCGAATGAACAGTATCTCTTAGCCCAGCAACCCTACTACCCT
CATACTCCGACGCCGACTCATGAGTTTTACCCCCACCAGAGCCTACACAT
AACGCCGGTGCCCATACAAGAACAACCACCGATCGTGACCCAGCACATCC
CTGTCACGTCACCGGTTGATGTGCAGCGTGCTCAGCAACACTACATGCAG
CTTGTGCAGCAACAGCAACAGCAACAGCAGCGGTACGATCCTGGTCGGCA
GGGGTATCTGCCACCGGAGTTTCAGCAACCATACCATGCTCTACCCACAG
CGGATGGTCCACCGCTGATGGTGACTAGCACTCAGAGTGACTACAAACCG
CCGGCCCGCATCCTGAACCAGCCCGAGGGAACGGACTGGGGCTTCCTGGG
GGTTGGCTAAATGGCGCCTGGTGGTGGACGAGATTTTAACTGCACCTGGG
AGCATTGCAACAAGTCCTTCAATCGCAAATCAGATCTGTGCAGGCACTAT
CGGATACACACCAATGAGCGACCGTATCATTGCACGGTCAAGGACTGCAA
TAAAAGCTTCATTCAACGGAGTGCATTGACAGTGCATTCGCGAACGCATA
CCGGAGAGAAGCCTCATGTCTGTGATCACAGAGGATGCCACAAGGCCTTT
TCTGACTCATCGAGTCTCGCTCGTCACCGAAGGATCCATACTGGAAAGAG
GCCCTATATCTGCCAAGAGCCAACATGCGAACGAGCCTTCTGCCGCAAAA
CGACCTTGACCAAGCACCAACACCGCTCTCACCCCCCGGGATCCATGACT
CGCCTGCCCTCCGAAGATGCGGTCTCTGAACACTCGTATCAAGGGCCAGT
CGCCGTTCCCGTGCCGAATGAACAGTATCTCTTAGCCCAGCAACCCTACT
ACCCTCATACTCCGACGCCGACTCATGAGTTTTACCCCCACCAGAGCCTA
CACATAACGCCGGTGCCCATACAAGAACAACCACCGATCGTGACCCAGCA
CATCCCTGTCACGTCACCGGTTGATGTGCAGCGTGCTCAGCAACACTACA
TGCAGCTTGTGCAGCAACAGCAACAGCAACAGCAGCGGTACGATCCTGGT
CGGCAGGGGTATCTGCCACCGGAGTTTCAGCAACCATACCATGCTCTACC
CACAGCGGATGGTCCACCGCTGATGGTGACTAGCACTCAGAGTGACTACA
AACCGCCGGCCCGCATCCTGAACCAGCCCGAGGGAACGGACTGGGGCTTC
CTGGGGGTTGGCTAAATGGCGCCTGGTGGTGGACGAGATTTTAACTGCAC
CTGGGAGCATTGCAACAAGTCCTTCAATCGCAAATCAGATCTGTGCAGGC
ACTATCGGATACACACCAATGAGCGACCGTATCATTGCACGGTCAAGGAC
TGCAATAAAAGCTTCATTCAACGGAGTGCATTGACAGTGCATTCGCGAAC
GCATACCGGAGAGAAGCCTCATGTCTGTGATCACAGAGGATGCCACAAGG
CCTTTTCTGACTCATCGAGTCTCGCTCGTCACCGAAGGATCCATACTGGA
AAGAGGCCCTATATCTGCCAAGAGCCAACATGCGAACGAGCCTTCTGCCG
CAAAACGACCTTGACCAAGCACCAACACCGCTCTCACCCCCCGGGATCCA
TGACTCGCCTGCCCTCCGAAGATGCGGTCTCTGAACACTCGTATCAAGGG
CCAGTCGCCGTTCCCGTGCCGAATGAACAGTATCTCTTAGCCCAGCAACC
CTACTACCCTCATACTCCGACGCCGACTCATGAGTTTTACCCCCACCAGA
GCCTACACATAACGCCGGTGCCCATACAAGAACAACCACCGATCGTGACC
CAGCACATCCCTGTCACGTCACCGGTTGATGTGCAGCGTGCTCAGCAACA
CTACATGCAGCTTGTGCAGCAACAGCAACAGCAACAGCAGCGGTACGATC
CTGGTCGGCAGGGGTATCTGCCACCGGAGTTTCAGCAACCATACCATGCT
CTACCCACAGCGGATGGTCCACCGCTGATGGTGACTAGCACTCAGAGTGA
CTACAAACCGCCGGCCCGCATCCTGAACCAGCCCGAGGGAACGGACTGGG
GCTTCCTGGGGGTTGGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_80420ATCC64974_80420Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80420-T1.exon1ATCC64974_80420-T1.exon1Aspergillus niger N402exon
ATCC64974_80420-T1.exon2ATCC64974_80420-T1.exon2Aspergillus niger N402exon
ATCC64974_80420-T1.exon3ATCC64974_80420-T1.exon3Aspergillus niger N402exon
ATCC64974_80420-T1.exon4ATCC64974_80420-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80420-T1.cdsATCC64974_80420-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_80420-T1ATCC64974_80420-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:2178409..2179452 +
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