You are here

Home

ATCC64974_82190-T1, ATCC64974_82190-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_82190-T1
Unique NameATCC64974_82190-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000013.1:2774214..2775711+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_82190-T1 ID=ATCC64974_82190-T1|Name=ATCC64974_82190-T1|organism=Aspergillus niger N402|type=mRNA|length=1498bp|location=Sequence derived from alignment at OGUI01000013.1:2774214..2775711+ (Aspergillus niger N402)
ATGAATGCGTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCTCGAC
CTTTCATGCCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCGGCGC
CTGGCATTCGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAGTCAG
GCTGGAAATGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATGATGA
AGTATTCGCTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCACTATG
AGGGCCGATTGTATGTTACACCCATCCTGTGCCTGGCTCCAATTAACGGT
AGACAGCATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCTGGGATC
TGGAGACACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTGGCATCA
GTCAACAGAGCCTCGCATGAAGATGCCCACACACGTGCCATTACCTCCGT
CTCTATATACCCATTTGATCCCACCCCGTCTACTATTTTGACAACCTCGT
ACGATGGCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATCACACCT
GTGCACACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTTGTCGTC
AAATCCAGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGAAGCCGG
TCCGATTGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTCCCCGGG
CATGAATCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCCACACAT
ATTGGCTTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATATCCGCC
GAGGAGGCCACAATTCAGCCATCGCTGCACTAGACATGGATGATGCTGTC
GGACTTGTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCGCCCAGC
ATTCTCACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCGTGCGGT
GGACGTCCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCTCGGATT
CGGGTCTGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTTCGGTCA
GCGCGTGCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCACCGCTAA
TTATACCTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTATGGCCG
AATTTCAATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGAACTTCG
AGAGGGGGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGACCGGTC
GTCAGCAGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGGATCAAC
GCCCTTGCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGAGATGTA
TTCAGCCCACGGCGACGGGACCATTCGCACATGGGCCTCACGGGAACCCG
AGGGTGAGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGACCGCAAG
CGCAAGCGCGACATTCTCGACGAACTCTACCGAGGATTTATAGGCTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000013.1:2774214..2775711+

>ATCC64974_82190-T1 ID=ATCC64974_82190-T1|Name=ATCC64974_82190-T1|organism=Aspergillus niger N402|type=CDS|length=2904bp|location=Sequence derived from alignment at OGUI01000013.1:2774214..2775711+ (Aspergillus niger N402)
ATGAATGCGTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCTCGAC
CTTTCATGCCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCGGCGC
CTGGCATTCGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAGTCAG
GCTGGAAATGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATGATGA
AGTATTCGCTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCACTATG
AGGGCCGATTCATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCTGG
GATCTGGAGACACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTGGC
ATCAGTCAACAGAGCCTCGCATGAAGATGCCCACACACGTGCCATTACCT
CCGTCTCTATATACCCATTTGATCCCACCCCGTCTACTATTTTGACAACC
TCGTACGATGGCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATCAC
ACCTGTGCACACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTTGT
CGTCAAATCCAGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGAAG
CCGGTCCGATTGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTCCC
CGGGCATGAATCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCCAC
ACATATTGGCTTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATATC
CGCCGAGGAGGCCACAATTCAGCCATCGCTGCACTAGACATGGATGATGC
TGTCGGACTTGTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCGCC
CAGCATTCTCACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCGTG
CGGTGGACGTCCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCTCG
GATTCGGGTCTGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTTCG
GTCAGCGCGTGCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCACCG
CTAATTATACCTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTATG
GCCGAATTTCAATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGAAC
TTCGAGAGGGGGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGACC
GGTCGTCAGCAGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGGAT
CAACGCCCTTGCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGAGA
TGTATTCAGCCCACGGCGACGGGACCATTCGCACATGGGCCTCACGGGAA
CCCGAGGGTGAGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGACCG
CAAGCGCAAGCGCGACATTCTCGACGAACTCTACCGAGGATTTATAGGCT
AAATGAATGCGTATCTTCTCAATAGGGCTTTAGGGTCCATAAGTCCCTCG
ACCTTTCATGCCGCACAAACCACACGGCTTGTTCAACAGCTCGAGCCGGC
GCCTGGCATTCGCTTCTCAGCACGTAGAGACATATTCTCAGGAGAAAGTC
AGGCTGGAAATGAATATCCTCATGAGGATGCAGGATTGGTCTTTGATGAT
GAAGTATTCGCTCATAAGGCGGGAGTGAATGTGCTCGCCATCGATCACTA
TGAGGGCCGATTCATGGTTTCTGGGGGTGCAGATCCTTCGATTAATCTCT
GGGATCTGGAGACACGGGGCTCGGATCTGAAACATGTGCACCAGCCTGTG
GCATCAGTCAACAGAGCCTCGCATGAAGATGCCCACACACGTGCCATTAC
CTCCGTCTCTATATACCCATTTGATCCCACCCCGTCTACTATTTTGACAA
CCTCGTACGATGGCACACTCAAGCTTTCGGCTTTAGGGCCGGGGGCGATC
ACACCTGTGCACACTTTCAACCTAGATTGCACCCCGTACACCCATTCGTT
GTCGTCAAATCCAGGGTCTCCTTTACTCATTGCAGTAGGTACCTCAGAGA
AGCCGGTCCGATTGCTTGACCTACGTTCAGGCTTGTCGACGCATGGTCTC
CCCGGGCATGAATCTTCAGTCCTGTCCGTATCATGGGCTCCTCATCAGCC
ACACATATTGGCTTCTGCGTCGGCAGATAATAGAGTAATTCTCTTCGATA
TCCGCCGAGGAGGCCACAATTCAGCCATCGCTGCACTAGACATGGATGAT
GCTGTCGGACTTGTACGCCCGGGATCCATCCCAGCATCCTACCAGAGCCG
CCCAGCATTCTCACCGCACGCTCGAGCCCATAATGGCGCTGTGACCGGCG
TGCGGTGGACGTCCAGTGGTAGTCACCTGGTGACCGCTGGCCAGGACTCT
CGGATTCGGGTCTGGGATGCCGGGACAGGTGCGAATACGCTTGTGCACTT
CGGTCAGCGCGTGCGGAACAGTGTAACTTCGCACCTGGCCGAAAGGGCAC
CGCTAATTATACCTCGCGGAATGGTCATTCCAGGGCAAGAAACCCTTTTA
TGGCCGAATTTCAATGAGAGAGACGACCGCGGGGAGATCTTCATGTTTGA
ACTTCGAGAGGGGGCTTTTGTCAAACTCCTCCGCGTACCGGGACTTATGA
CCGGTCGTCAGCAGTTCCAGGGACGCTCAAGTGCCCTCAGCGCTGCGAGG
ATCAACGCCCTTGCTTGGCGCGGCAACGGTTCCTCAGGAGAAGGGATCGA
GATGTATTCAGCCCACGGCGACGGGACCATTCGCACATGGGCCTCACGGG
AACCCGAGGGTGAGCCGGATGATGAAGCCGCCGAAGCCGAACGAGCAGAC
CGCAAGCGCAAGCGCGACATTCTCGACGAACTCTACCGAGGATTTATAGG
CTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_82190ATCC64974_82190Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_82190-T1.exon1ATCC64974_82190-T1.exon1Aspergillus niger N402exon
ATCC64974_82190-T1.exon2ATCC64974_82190-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_82190-T1.cdsATCC64974_82190-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_82190-T1ATCC64974_82190-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000013.1supercontigOGUI01000013.1:2774214..2775711 +
Powered by Drupal