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ATCC64974_83050-T1, ATCC64974_83050-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_83050-T1
Unique NameATCC64974_83050-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000014.1:213630..214144-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_83050-T1 ID=ATCC64974_83050-T1|Name=ATCC64974_83050-T1|organism=Aspergillus niger N402|type=mRNA|length=515bp|location=Sequence derived from alignment at OGUI01000014.1:213630..214144- (Aspergillus niger N402)
ATGCCTTCATTTTCTGCTCTTGCGGAGAGGGCCCAGGCCCTGCAAAACCT
TATCGGGTACATCTTCAATGACCCGAAGCGTGCGATGGAAGCACTAGTCG
CTGCTGGGGTTTACATGCCCGGATTGATCAATCGCACGGATGGTCACAAG
CAACTTGCCCTCGTTGGGGATGCCGTTCTCAGAATGGTTCTGGCGCTGGA
CGGATACGAAGCCCGAAAGGGCAGAGGTAGATATTATTCCATTTGACCAG
AATCACATTCTCATCCCTTATGGCAGAATTCACCAACAATATCCTCTCAA
CGAAGGCCGGCAACACATACATCGCCCAGGCTGGGCGTAACCTGGGCCTG
GACAAACTTGTCATTGTCAATCCAGCCCAGGCCGGAATGGTATCCGACAA
AGTCATGGCCAGCGCCGTTGAAGCTATTATCGGAGCTGTCTTCATGGACA
GCGATGGCTCTGTTGAGTCCGTGCGACCTGTCCTGACTATTTTGGGCCTT
GGCTGGCCCGCTTGA
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Coding sequence (CDS) from alignment at OGUI01000014.1:213630..214144-

>ATCC64974_83050-T1 ID=ATCC64974_83050-T1|Name=ATCC64974_83050-T1|organism=Aspergillus niger N402|type=CDS|length=930bp|location=Sequence derived from alignment at OGUI01000014.1:213630..214144- (Aspergillus niger N402)
AATTCACCAACAATATCCTCTCAACGAAGGCCGGCAACACATACATCGCC
CAGGCTGGGCGTAACCTGGGCCTGGACAAACTTGTCATTGTCAATCCAGC
CCAGGCCGGAATGGTATCCGACAAAGTCATGGCCAGCGCCGTTGAAGCTA
TTATCGGAGCTGTCTTCATGGACAGCGATGGCTCTGTTGAGTCCGTGCGA
CCTGTCCTGACTATTTTGGGCCTTGGCTGGCCCGCTTGAATGCCTTCATT
TTCTGCTCTTGCGGAGAGGGCCCAGGCCCTGCAAAACCTTATCGGGTACA
TCTTCAATGACCCGAAGCGTGCGATGGAAGCACTAGTCGCTGCTGGGGTT
TACATGCCCGGATTGATCAATCGCACGGATGGTCACAAGCAACTTGCCCT
CGTTGGGGATGCCGTTCTCAGAATGGTTCTGGCGCTGGACGGATACGAAG
CCCGAAAGGGCAGAGAATTCACCAACAATATCCTCTCAACGAAGGCCGGC
AACACATACATCGCCCAGGCTGGGCGTAACCTGGGCCTGGACAAACTTGT
CATTGTCAATCCAGCCCAGGCCGGAATGGTATCCGACAAAGTCATGGCCA
GCGCCGTTGAAGCTATTATCGGAGCTGTCTTCATGGACAGCGATGGCTCT
GTTGAGTCCGTGCGACCTGTCCTGACTATTTTGGGCCTTGGCTGGCCCGC
TTGAATGCCTTCATTTTCTGCTCTTGCGGAGAGGGCCCAGGCCCTGCAAA
ACCTTATCGGGTACATCTTCAATGACCCGAAGCGTGCGATGGAAGCACTA
GTCGCTGCTGGGGTTTACATGCCCGGATTGATCAATCGCACGGATGGTCA
CAAGCAACTTGCCCTCGTTGGGGATGCCGTTCTCAGAATGGTTCTGGCGC
TGGACGGATACGAAGCCCGAAAGGGCAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_83050ATCC64974_83050Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83050-T1ATCC64974_83050-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83050-T1.cdsATCC64974_83050-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_83050-T1.exon2ATCC64974_83050-T1.exon2Aspergillus niger N402exon
ATCC64974_83050-T1.exon1ATCC64974_83050-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000141.5
DBxrefInterPro:IPR036389
DBxrefInterPro:IPR000999
DBxrefPFAM:PF00636
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000014.1supercontigOGUI01000014.1:213630..214144 -
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