You are here

Home

ATCC64974_91260-T1, ATCC64974_91260-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_91260-T1
Unique NameATCC64974_91260-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:1417030..1419076-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_91260-T1 ID=ATCC64974_91260-T1|Name=ATCC64974_91260-T1|organism=Aspergillus niger N402|type=mRNA|length=2047bp|location=Sequence derived from alignment at OGUI01000016.1:1417030..1419076- (Aspergillus niger N402)
ATGATTGAAATAGACCAGGAGGAGGGTCCCCAGACAAAGCGGAGAAAAGT
CCGCAAGGGCACGCGAAGTTGCTGGGAGTGTAAGCGGCGCAAGGTCCGGT
GCATCTTTAGCTCCCCCACCGGCACTATCTGCGATAACTGCAGACGACGG
GGATCTACATGCATCAGCCAGGAGCTCCCAGACAGCCCAATATTTACAAG
CAATGACTCGGTTGATGCTCGACTCGACCGAGTGGAGAGGTTCCTCGCAC
AGCTGGTTAGCCCGGGCGCTACCCAAGCTGTATCTTCCGAAGATCATTCC
GAAACTCCACCGACTTCTGGGACGTTAGACAATCATACGGAATCTAATCA
AGAAGAACATGTGAGTACAGTTCTGACATATACATTCTAATTACCCAGAG
CTGACGCCCCAGGAGCCGTTACCAGTTAACAGCATCACCACCGGCCAATA
TGCATGCATAAATCGCGACCTTCTCGAGGCATGGCCCAGCCAGAGGGAGC
TGAACCATATCTTCACCCTCCCTGTTGGAATATCAACGTACATGAGCTAT
GGAATCTGCGCCCCTAACTTTACCTCCACAAACCATGACCTACCGTCATC
CAAAGAAATGCTCCAACTACCTCCACCGACCTCCCACCCCGTCCTAATCG
CCCGCAAACTACTCACCCTGGGCATCTTCCTCCAAGGCATTCCCCCATCC
TCCATCCAAGCCCTAGCCGACCTATCCATCTCCCACCACGACATCATGTC
CCGCGTCGTCGCCTGCGCCACCAGACTAGTAACGACCAACGATGAACTCA
CCCCTTCCATCGAAGGCGTGCAATGCATCATGCTCGAAGCCCAATACCAG
AACTTTGCCGGCAACCTGCATCAAGCATGGCTGGCCACTCGCAGAGCCAC
AGCCATCGCACAAATGCTGTCTCTCCACCGTGGACTCTCACCATCATCCC
TAAAGACTCTCGACCCAGCCACCCGCAACACCCTAAACCCAGACTACCTG
TGCTTCCGCCTCGTCGAAATGGACCATTACCTCTCCCTGATGCTCGGCCT
CCCGCCCACCTCCCTTGAGGCACGGTATCTCTCCCCAAAAGCCCTAGAGA
CATGCACGCCGCAAGACCGCATGCACCGCATGCACTGCATCGTGGCAGGA
CGCATACTCCACCGCACAGACGGCGACATCAACAACCTCTCCCTCACTCA
GGATATTGACTCCATGCTCCAGAACGCAGCTGCTCAAATGCCTCCCCAGT
GGTGGCTCATTCCAGACCTATTACCCAGCCATACTCCCAAAGACATCATC
CACAACACCCTCCGTCTTACTCACCACTTCACGCACTACCAACTCCTCCT
CCGCCTGCACCTGCCCTACATGCTCCGCTCATCCCAAGATACTACGGTCT
ATGACCAAAGCAAACTCACCATCATAACCGTAAGTCGCGAGATTCTCTCC
CGATACATCCATTTCCGCACCTCGGATCCAGCCCAGTATTACTGCCGTGG
GGTGGATTTCATTGCTTTTGTAGCGACTACAGTGCTGTGTATTGCGCACA
TAGACTCCCCCAGCAATATGCAGCACGGGAAGGGAACAATAGCCACCTTC
CTCGCGCATAGCCGACCGAGTGACCACGGAATGATGGAACGAGCACATTC
TATGATTGAAGATATGGCGGGCTCAGGGCCAGGGACGGATGAGATTGCGG
GGAAGCTGGCAGGTATAATGAGACATTTGTTGGGGGTGGAGGAGAGTGCT
GCTGGGGGTGTTGGGTATGTGGCTAGGGAGGGGAATGAGGATAAGAAGGG
AGGAGGAGGGGAGTATGATGGAAGGGTAGGGGATGGAGGGACTAGTTTGC
ATGTTTATATCCCGTATTATGGGACGATCGGCTTTGAGAGGAGTGAGGAG
AGCGACATAGGGGAAGGTAATGGTGGTGGTGGTAGTGAAGGGTGGGATTT
GCAGGGTGTCGATGTGGCGCTGTTTAACAGTTTGTTCCGGGATATGGCGG
TTCCTGATATTGGGGAGGAGAGGTGGGAGGAGTGGGTTGGTGTGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:1417030..1419076-

>ATCC64974_91260-T1 ID=ATCC64974_91260-T1|Name=ATCC64974_91260-T1|organism=Aspergillus niger N402|type=CDS|length=3984bp|location=Sequence derived from alignment at OGUI01000016.1:1417030..1419076- (Aspergillus niger N402)
CCGTTACCAGTTAACAGCATCACCACCGGCCAATATGCATGCATAAATCG
CGACCTTCTCGAGGCATGGCCCAGCCAGAGGGAGCTGAACCATATCTTCA
CCCTCCCTGTTGGAATATCAACGTACATGAGCTATGGAATCTGCGCCCCT
AACTTTACCTCCACAAACCATGACCTACCGTCATCCAAAGAAATGCTCCA
ACTACCTCCACCGACCTCCCACCCCGTCCTAATCGCCCGCAAACTACTCA
CCCTGGGCATCTTCCTCCAAGGCATTCCCCCATCCTCCATCCAAGCCCTA
GCCGACCTATCCATCTCCCACCACGACATCATGTCCCGCGTCGTCGCCTG
CGCCACCAGACTAGTAACGACCAACGATGAACTCACCCCTTCCATCGAAG
GCGTGCAATGCATCATGCTCGAAGCCCAATACCAGAACTTTGCCGGCAAC
CTGCATCAAGCATGGCTGGCCACTCGCAGAGCCACAGCCATCGCACAAAT
GCTGTCTCTCCACCGTGGACTCTCACCATCATCCCTAAAGACTCTCGACC
CAGCCACCCGCAACACCCTAAACCCAGACTACCTGTGCTTCCGCCTCGTC
GAAATGGACCATTACCTCTCCCTGATGCTCGGCCTCCCGCCCACCTCCCT
TGAGGCACGGTATCTCTCCCCAAAAGCCCTAGAGACATGCACGCCGCAAG
ACCGCATGCACCGCATGCACTGCATCGTGGCAGGACGCATACTCCACCGC
ACAGACGGCGACATCAACAACCTCTCCCTCACTCAGGATATTGACTCCAT
GCTCCAGAACGCAGCTGCTCAAATGCCTCCCCAGTGGTGGCTCATTCCAG
ACCTATTACCCAGCCATACTCCCAAAGACATCATCCACAACACCCTCCGT
CTTACTCACCACTTCACGCACTACCAACTCCTCCTCCGCCTGCACCTGCC
CTACATGCTCCGCTCATCCCAAGATACTACGGTCTATGACCAAAGCAAAC
TCACCATCATAACCGTAAGTCGCGAGATTCTCTCCCGATACATCCATTTC
CGCACCTCGGATCCAGCCCAGTATTACTGCCGTGGGGTGGATTTCATTGC
TTTTGTAGCGACTACAGTGCTGTGTATTGCGCACATAGACTCCCCCAGCA
ATATGCAGCACGGGAAGGGAACAATAGCCACCTTCCTCGCGCATAGCCGA
CCGAGTGACCACGGAATGATGGAACGAGCACATTCTATGATTGAAGATAT
GGCGGGCTCAGGGCCAGGGACGGATGAGATTGCGGGGAAGCTGGCAGGTA
TAATGAGACATTTGTTGGGGGTGGAGGAGAGTGCTGCTGGGGGTGTTGGG
TATGTGGCTAGGGAGGGGAATGAGGATAAGAAGGGAGGAGGAGGGGAGTA
TGATGGAAGGGTAGGGGATGGAGGGACTAGTTTGCATGTTTATATCCCGT
ATTATGGGACGATCGGCTTTGAGAGGAGTGAGGAGAGCGACATAGGGGAA
GGTAATGGTGGTGGTGGTAGTGAAGGGTGGGATTTGCAGGGTGTCGATGT
GGCGCTGTTTAACAGTTTGTTCCGGGATATGGCGGTTCCTGATATTGGGG
AGGAGAGGTGGGAGGAGTGGGTTGGTGTGTAGATGATTGAAATAGACCAG
GAGGAGGGTCCCCAGACAAAGCGGAGAAAAGTCCGCAAGGGCACGCGAAG
TTGCTGGGAGTGTAAGCGGCGCAAGGTCCGGTGCATCTTTAGCTCCCCCA
CCGGCACTATCTGCGATAACTGCAGACGACGGGGATCTACATGCATCAGC
CAGGAGCTCCCAGACAGCCCAATATTTACAAGCAATGACTCGGTTGATGC
TCGACTCGACCGAGTGGAGAGGTTCCTCGCACAGCTGGTTAGCCCGGGCG
CTACCCAAGCTGTATCTTCCGAAGATCATTCCGAAACTCCACCGACTTCT
GGGACGTTAGACAATCATACGGAATCTAATCAAGAAGAACATCCGTTACC
AGTTAACAGCATCACCACCGGCCAATATGCATGCATAAATCGCGACCTTC
TCGAGGCATGGCCCAGCCAGAGGGAGCTGAACCATATCTTCACCCTCCCT
GTTGGAATATCAACGTACATGAGCTATGGAATCTGCGCCCCTAACTTTAC
CTCCACAAACCATGACCTACCGTCATCCAAAGAAATGCTCCAACTACCTC
CACCGACCTCCCACCCCGTCCTAATCGCCCGCAAACTACTCACCCTGGGC
ATCTTCCTCCAAGGCATTCCCCCATCCTCCATCCAAGCCCTAGCCGACCT
ATCCATCTCCCACCACGACATCATGTCCCGCGTCGTCGCCTGCGCCACCA
GACTAGTAACGACCAACGATGAACTCACCCCTTCCATCGAAGGCGTGCAA
TGCATCATGCTCGAAGCCCAATACCAGAACTTTGCCGGCAACCTGCATCA
AGCATGGCTGGCCACTCGCAGAGCCACAGCCATCGCACAAATGCTGTCTC
TCCACCGTGGACTCTCACCATCATCCCTAAAGACTCTCGACCCAGCCACC
CGCAACACCCTAAACCCAGACTACCTGTGCTTCCGCCTCGTCGAAATGGA
CCATTACCTCTCCCTGATGCTCGGCCTCCCGCCCACCTCCCTTGAGGCAC
GGTATCTCTCCCCAAAAGCCCTAGAGACATGCACGCCGCAAGACCGCATG
CACCGCATGCACTGCATCGTGGCAGGACGCATACTCCACCGCACAGACGG
CGACATCAACAACCTCTCCCTCACTCAGGATATTGACTCCATGCTCCAGA
ACGCAGCTGCTCAAATGCCTCCCCAGTGGTGGCTCATTCCAGACCTATTA
CCCAGCCATACTCCCAAAGACATCATCCACAACACCCTCCGTCTTACTCA
CCACTTCACGCACTACCAACTCCTCCTCCGCCTGCACCTGCCCTACATGC
TCCGCTCATCCCAAGATACTACGGTCTATGACCAAAGCAAACTCACCATC
ATAACCGTAAGTCGCGAGATTCTCTCCCGATACATCCATTTCCGCACCTC
GGATCCAGCCCAGTATTACTGCCGTGGGGTGGATTTCATTGCTTTTGTAG
CGACTACAGTGCTGTGTATTGCGCACATAGACTCCCCCAGCAATATGCAG
CACGGGAAGGGAACAATAGCCACCTTCCTCGCGCATAGCCGACCGAGTGA
CCACGGAATGATGGAACGAGCACATTCTATGATTGAAGATATGGCGGGCT
CAGGGCCAGGGACGGATGAGATTGCGGGGAAGCTGGCAGGTATAATGAGA
CATTTGTTGGGGGTGGAGGAGAGTGCTGCTGGGGGTGTTGGGTATGTGGC
TAGGGAGGGGAATGAGGATAAGAAGGGAGGAGGAGGGGAGTATGATGGAA
GGGTAGGGGATGGAGGGACTAGTTTGCATGTTTATATCCCGTATTATGGG
ACGATCGGCTTTGAGAGGAGTGAGGAGAGCGACATAGGGGAAGGTAATGG
TGGTGGTGGTAGTGAAGGGTGGGATTTGCAGGGTGTCGATGTGGCGCTGT
TTAACAGTTTGTTCCGGGATATGGCGGTTCCTGATATTGGGGAGGAGAGG
TGGGAGGAGTGGGTTGGTGTGTAGATGATTGAAATAGACCAGGAGGAGGG
TCCCCAGACAAAGCGGAGAAAAGTCCGCAAGGGCACGCGAAGTTGCTGGG
AGTGTAAGCGGCGCAAGGTCCGGTGCATCTTTAGCTCCCCCACCGGCACT
ATCTGCGATAACTGCAGACGACGGGGATCTACATGCATCAGCCAGGAGCT
CCCAGACAGCCCAATATTTACAAGCAATGACTCGGTTGATGCTCGACTCG
ACCGAGTGGAGAGGTTCCTCGCACAGCTGGTTAGCCCGGGCGCTACCCAA
GCTGTATCTTCCGAAGATCATTCCGAAACTCCACCGACTTCTGGGACGTT
AGACAATCATACGGAATCTAATCAAGAAGAACAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_91260ATCC64974_91260Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_91260-T1ATCC64974_91260-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_91260-T1.cdsATCC64974_91260-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_91260-T1.exon2ATCC64974_91260-T1.exon2Aspergillus niger N402exon
ATCC64974_91260-T1.exon1ATCC64974_91260-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000161.8
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:1417030..1419076 -
Powered by Drupal