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ATCC64974_94560-T1, ATCC64974_94560-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_94560-T1
Unique NameATCC64974_94560-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:2411884..2413134+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_94560-T1 ID=ATCC64974_94560-T1|Name=ATCC64974_94560-T1|organism=Aspergillus niger N402|type=mRNA|length=1251bp|location=Sequence derived from alignment at OGUI01000016.1:2411884..2413134+ (Aspergillus niger N402)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCCACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACCGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTGTATGCGCATAATATTGAGAC
TGTTGAGGCGCTTACCCCCCGTGTCCGTGATCGCAGGGCTACCTTCAAGC
AGAGTATTGCTGTGTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATT
ACGAAGTCTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGA
GCATGCGCTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCG
GGCAGTATATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTT
CATCCGAGATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTT
CCTCTACTGTGCTTCTGGACCGTTGGTGCGTAGTTCTTATAAGGCTGGTG
AGGCGTTCATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGAT
GCTGTTGCCGAGAAAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTG
A
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Coding sequence (CDS) from alignment at OGUI01000016.1:2411884..2413134+

>ATCC64974_94560-T1 ID=ATCC64974_94560-T1|Name=ATCC64974_94560-T1|organism=Aspergillus niger N402|type=CDS|length=1251bp|location=Sequence derived from alignment at OGUI01000016.1:2411884..2413134+ (Aspergillus niger N402)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCCACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACCGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTGTATGCGCATAATATTGAGAC
TGTTGAGGCGCTTACCCCCCGTGTCCGTGATCGCAGGGCTACCTTCAAGC
AGAGTATTGCTGTGTTGGAGGCGGCGAAGAAGGCCAACCCGGAGGTTATT
ACGAAGTCTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGA
GCATGCGCTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCG
GGCAGTATATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTT
CATCCGAGATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTT
CCTCTACTGTGCTTCTGGACCGTTGGTGCGTAGTTCTTATAAGGCTGGTG
AGGCGTTCATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGAT
GCTGTTGCCGAGAAAAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTG
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009107lipoate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0016992lipoate synthase activity
GO:0051536iron-sulfur cluster binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_94560ATCC64974_94560Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94560-T1.exon1ATCC64974_94560-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94560-T1.cdsATCC64974_94560-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94560-T1ATCC64974_94560-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926131E
DBxrefInterPro:IPR031691
DBxrefInterPro:IPR003698
DBxrefInterPro:IPR007197
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR006638
DBxrefPFAM:PF04055
DBxrefPFAM:PF16881
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:2411884..2413134 +
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