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ATCC64974_96310-T1, ATCC64974_96310-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_96310-T1
Unique NameATCC64974_96310-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:164269..165756+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_96310-T1 ID=ATCC64974_96310-T1|Name=ATCC64974_96310-T1|organism=Aspergillus niger N402|type=mRNA|length=1488bp|location=Sequence derived from alignment at OGUI01000017.1:164269..165756+ (Aspergillus niger N402)
ATGCGCGCCAGCATTCTACCGTTGACTCTGTTCTTGGCCACTCTGGCCGG
GGCGCAACTCTCCGGCCCCGTTGGCCCGCTAGTGGACTACAGCACCAAAG
CCAGAAACCAGACCTGCAATATCATCGATTACGGGGCTGTCGCAGATGGT
AAAACGGATATATCGCAGGCTCTACTTGATGCCTGGGGAAACTGTTCCGT
GGGGGGACTGGTCTACATCCCACCCGGTAACTACTCGCTGGCCGAGGACA
TTGAGCTCAAGCACGGCCAGTCCTCTGCAATTCAGCTAGACGGTGTGGTT
ATGCGCGGACACCGCGGCTCGTACCAGATGATCCTTATCCGTGACTGCAA
TGACTTCGAATTTTTCAGCGGCAATTCCCGCGGGGCCATTCAGGGCTTTG
GTTACGAATATCTGCAGAATGACACCTACGGCGAGAGACTCTTGCGCATC
CAAGAGGTTAACAATTTCTCGGTGCATGGATTCGCACTAATTGACTCGCC
TTCCTACTACATTGTTTTCGATACGGTCACCAGTGGGGAGGTATATAACA
TCTTGATCCGCGGCGTGACATCTGTGGGAGCGACAGATGCTATCGACGTA
TGGGGAGAGAACATGTGGTTCCATGACATTGAAGTGAGCAACGGCGATGA
ATGTGTCACCGTCAAGTCTCCGGCGCACAATTATCTGATTGAGAACATCT
ACTGCAATCTCAGTGGTGGGACCGCGATTGGATCCTTAGGCACGGGCACC
AACATTTCCGACATCCACTACCGCAATCTCTACATGAACCAAGCAGATGC
GTGCTTTCTGAAATCCAACAATGGGGATGGGATTGTCAAAAATATCATCT
GGGAGAATGTCATAGTCCACGGCGGTCCGTACCCGCTGGCCATAGACGAG
GCCTGGGGAGATGATCGAGGATCCGTAGGAGTTCAAGTGTCCAACCTCAC
ATTCCGAGTAAGTACACGATAATATTTCAATGTCTTAAGAGATCCTAATT
TGCTTTGTTATATAGAACTGGCACGGAGAATCCGTGAGCGCCTCACGCCC
AGTCATCCGCCTACAATGTGACTCCGACGTCCCGTGCTACGATATTACCA
TCGAAAACGTGAACCTGTGGGCCAACGACAGCAACTATGTGGTTTGGCAG
TGCGAGAACGCCTATGGAGATGGGGCCTGTCTCTCTAGTGCAGAGGGAAC
AAAAGATTTGAAAACCTTTACCAGCAAACAAACTATAACTGCCACCCCGT
ATGTGACTTGTCCATTCTTTTCCACCGAAATTGCTAACAAGAAGATAGGT
CCTATGCTGCGCCAACCATGGCAGCTGACTTCACCTCTAATCTGCCATCA
ACGAGCCCTTTTACTATTCCTCCCATGCCGACAAGTTTCTACCCCGGTGC
TACTCCCATCTCAACCCTCTTGCATCTACATGGTGCGGGCGGTCTCCCAT
CAGCATCTCCCATTTCGCATCATCGACGACACCAATGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:164269..165756+

>ATCC64974_96310-T1 ID=ATCC64974_96310-T1|Name=ATCC64974_96310-T1|organism=Aspergillus niger N402|type=CDS|length=4140bp|location=Sequence derived from alignment at OGUI01000017.1:164269..165756+ (Aspergillus niger N402)
ATGCGCGCCAGCATTCTACCGTTGACTCTGTTCTTGGCCACTCTGGCCGG
GGCGCAACTCTCCGGCCCCGTTGGCCCGCTAGTGGACTACAGCACCAAAG
CCAGAAACCAGACCTGCAATATCATCGATTACGGGGCTGTCGCAGATGGT
AAAACGGATATATCGCAGGCTCTACTTGATGCCTGGGGAAACTGTTCCGT
GGGGGGACTGGTCTACATCCCACCCGGTAACTACTCGCTGGCCGAGGACA
TTGAGCTCAAGCACGGCCAGTCCTCTGCAATTCAGCTAGACGGTGTGGTT
ATGCGCGGACACCGCGGCTCGTACCAGATGATCCTTATCCGTGACTGCAA
TGACTTCGAATTTTTCAGCGGCAATTCCCGCGGGGCCATTCAGGGCTTTG
GTTACGAATATCTGCAGAATGACACCTACGGCGAGAGACTCTTGCGCATC
CAAGAGGTTAACAATTTCTCGGTGCATGGATTCGCACTAATTGACTCGCC
TTCCTACTACATTGTTTTCGATACGGTCACCAGTGGGGAGGTATATAACA
TCTTGATCCGCGGCGTGACATCTGTGGGAGCGACAGATGCTATCGACGTA
TGGGGAGAGAACATGTGGTTCCATGACATTGAAGTGAGCAACGGCGATGA
ATGTGTCACCGTCAAGTCTCCGGCGCACAATTATCTGATTGAGAACATCT
ACTGCAATCTCAGTGGTGGGACCGCGATTGGATCCTTAGGCACGGGCACC
AACATTTCCGACATCCACTACCGCAATCTCTACATGAACCAAGCAGATGC
GTGCTTTCTGAAATCCAACAATGGGGATGGGATTGTCAAAAATATCATCT
GGGAGAATGTCATAGTCCACGGCGGTCCGTACCCGCTGGCCATAGACGAG
GCCTGGGGAGATGATCGAGGATCCGTAGGAGTTCAAGTGTCCAACCTCAC
ATTCCGAAACTGGCACGGAGAATCCGTGAGCGCCTCACGCCCAGTCATCC
GCCTACAATGTGACTCCGACGTCCCGTGCTACGATATTACCATCGAAAAC
GTGAACCTGTGGGCCAACGACAGCAACTATGTGGTTTGGCAGTGCGAGAA
CGCCTATGGAGATGGGGCCTGTCTCTCTAGTGCAGAGGGAACAAAAGATT
TGAAAACCTTTACCAGCAAACAAACTATAACTGCCACCCCGTCCTATGCT
GCGCCAACCATGGCAGCTGACTTCACCTCTAATCTGCCATCAACGAGCCC
TTTTACTATTCCTCCCATGCCGACAAGTTTCTACCCCGGTGCTACTCCCA
TCTCAACCCTCTTGCATCTACATGGTGCGGGCGGTCTCCCATCAGCATCT
CCCATTTCGCATCATCGACGACACCAATGAATGCGCGCCAGCATTCTACC
GTTGACTCTGTTCTTGGCCACTCTGGCCGGGGCGCAACTCTCCGGCCCCG
TTGGCCCGCTAGTGGACTACAGCACCAAAGCCAGAAACCAGACCTGCAAT
ATCATCGATTACGGGGCTGTCGCAGATGGTAAAACGGATATATCGCAGGC
TCTACTTGATGCCTGGGGAAACTGTTCCGTGGGGGGACTGGTCTACATCC
CACCCGGTAACTACTCGCTGGCCGAGGACATTGAGCTCAAGCACGGCCAG
TCCTCTGCAATTCAGCTAGACGGTGTGGTTATGCGCGGACACCGCGGCTC
GTACCAGATGATCCTTATCCGTGACTGCAATGACTTCGAATTTTTCAGCG
GCAATTCCCGCGGGGCCATTCAGGGCTTTGGTTACGAATATCTGCAGAAT
GACACCTACGGCGAGAGACTCTTGCGCATCCAAGAGGTTAACAATTTCTC
GGTGCATGGATTCGCACTAATTGACTCGCCTTCCTACTACATTGTTTTCG
ATACGGTCACCAGTGGGGAGGTATATAACATCTTGATCCGCGGCGTGACA
TCTGTGGGAGCGACAGATGCTATCGACGTATGGGGAGAGAACATGTGGTT
CCATGACATTGAAGTGAGCAACGGCGATGAATGTGTCACCGTCAAGTCTC
CGGCGCACAATTATCTGATTGAGAACATCTACTGCAATCTCAGTGGTGGG
ACCGCGATTGGATCCTTAGGCACGGGCACCAACATTTCCGACATCCACTA
CCGCAATCTCTACATGAACCAAGCAGATGCGTGCTTTCTGAAATCCAACA
ATGGGGATGGGATTGTCAAAAATATCATCTGGGAGAATGTCATAGTCCAC
GGCGGTCCGTACCCGCTGGCCATAGACGAGGCCTGGGGAGATGATCGAGG
ATCCGTAGGAGTTCAAGTGTCCAACCTCACATTCCGAAACTGGCACGGAG
AATCCGTGAGCGCCTCACGCCCAGTCATCCGCCTACAATGTGACTCCGAC
GTCCCGTGCTACGATATTACCATCGAAAACGTGAACCTGTGGGCCAACGA
CAGCAACTATGTGGTTTGGCAGTGCGAGAACGCCTATGGAGATGGGGCCT
GTCTCTCTAGTGCAGAGGGAACAAAAGATTTGAAAACCTTTACCAGCAAA
CAAACTATAACTGCCACCCCGTCCTATGCTGCGCCAACCATGGCAGCTGA
CTTCACCTCTAATCTGCCATCAACGAGCCCTTTTACTATTCCTCCCATGC
CGACAAGTTTCTACCCCGGTGCTACTCCCATCTCAACCCTCTTGCATCTA
CATGGTGCGGGCGGTCTCCCATCAGCATCTCCCATTTCGCATCATCGACG
ACACCAATGAATGCGCGCCAGCATTCTACCGTTGACTCTGTTCTTGGCCA
CTCTGGCCGGGGCGCAACTCTCCGGCCCCGTTGGCCCGCTAGTGGACTAC
AGCACCAAAGCCAGAAACCAGACCTGCAATATCATCGATTACGGGGCTGT
CGCAGATGGTAAAACGGATATATCGCAGGCTCTACTTGATGCCTGGGGAA
ACTGTTCCGTGGGGGGACTGGTCTACATCCCACCCGGTAACTACTCGCTG
GCCGAGGACATTGAGCTCAAGCACGGCCAGTCCTCTGCAATTCAGCTAGA
CGGTGTGGTTATGCGCGGACACCGCGGCTCGTACCAGATGATCCTTATCC
GTGACTGCAATGACTTCGAATTTTTCAGCGGCAATTCCCGCGGGGCCATT
CAGGGCTTTGGTTACGAATATCTGCAGAATGACACCTACGGCGAGAGACT
CTTGCGCATCCAAGAGGTTAACAATTTCTCGGTGCATGGATTCGCACTAA
TTGACTCGCCTTCCTACTACATTGTTTTCGATACGGTCACCAGTGGGGAG
GTATATAACATCTTGATCCGCGGCGTGACATCTGTGGGAGCGACAGATGC
TATCGACGTATGGGGAGAGAACATGTGGTTCCATGACATTGAAGTGAGCA
ACGGCGATGAATGTGTCACCGTCAAGTCTCCGGCGCACAATTATCTGATT
GAGAACATCTACTGCAATCTCAGTGGTGGGACCGCGATTGGATCCTTAGG
CACGGGCACCAACATTTCCGACATCCACTACCGCAATCTCTACATGAACC
AAGCAGATGCGTGCTTTCTGAAATCCAACAATGGGGATGGGATTGTCAAA
AATATCATCTGGGAGAATGTCATAGTCCACGGCGGTCCGTACCCGCTGGC
CATAGACGAGGCCTGGGGAGATGATCGAGGATCCGTAGGAGTTCAAGTGT
CCAACCTCACATTCCGAAACTGGCACGGAGAATCCGTGAGCGCCTCACGC
CCAGTCATCCGCCTACAATGTGACTCCGACGTCCCGTGCTACGATATTAC
CATCGAAAACGTGAACCTGTGGGCCAACGACAGCAACTATGTGGTTTGGC
AGTGCGAGAACGCCTATGGAGATGGGGCCTGTCTCTCTAGTGCAGAGGGA
ACAAAAGATTTGAAAACCTTTACCAGCAAACAAACTATAACTGCCACCCC
GTCCTATGCTGCGCCAACCATGGCAGCTGACTTCACCTCTAATCTGCCAT
CAACGAGCCCTTTTACTATTCCTCCCATGCCGACAAGTTTCTACCCCGGT
GCTACTCCCATCTCAACCCTCTTGCATCTACATGGTGCGGGCGGTCTCCC
ATCAGCATCTCCCATTTCGCATCATCGACGACACCAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_96310ATCC64974_96310Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96310-T1.exon1ATCC64974_96310-T1.exon1Aspergillus niger N402exon
ATCC64974_96310-T1.exon2ATCC64974_96310-T1.exon2Aspergillus niger N402exon
ATCC64974_96310-T1.exon3ATCC64974_96310-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96310-T1.cdsATCC64974_96310-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96310-T1ATCC64974_96310-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefPFAM:PF12708
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:164269..165756 +
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