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ATCC64974_96350-T1, ATCC64974_96350-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_96350-T1
Unique NameATCC64974_96350-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:176437..177969+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_96350-T1 ID=ATCC64974_96350-T1|Name=ATCC64974_96350-T1|organism=Aspergillus niger N402|type=mRNA|length=1533bp|location=Sequence derived from alignment at OGUI01000017.1:176437..177969+ (Aspergillus niger N402)
ATGTCATCTTCCAACCCTCCACGGGAGGTCCCCTGGCTCATCTGGGTCGT
GGCTATCTTTGGCTCCGTCTCATCCGCGGGCTTTGGCTTTGATCAGGGCT
GGTGGGCAAGTATTATGAGTTCGACGCAATTTACCCGTGTCTTTGGCTCC
TACGACCCAGCCCAGCAGGCCTGGTCCCTCAGCGATCGACAGCAGTCCCT
CGGCACGGGTCTGGGCTATGTAGGGGTCATCCTCGGGTTGGTGTGCGGCA
CACCACTGAACGAAAAATTTGGACGACGGAACAGTCTCTGGCTGCAGTCG
GTGGTGGTGACTGCTGGGGTCGCCATTGAAGCATCCTGCCAGGACAGCTA
CGCGCAATTCCTGGTGGGCAAGGCAGTCGTCTACTTCGCCGGTGGCATCG
CCTCAACGGTCATTCCGGTCTACCAAGGAGAGTGCGCACCTCAGCACCTC
CGAGGAATGATGACGAGTCTATACAATGCCTTCCTGATGGTAGGCGGCTT
TTGTGCCGCCCTCATCGTCTACCTCTGTCGCCATGTACCGAGCGACTGGG
CCTGGCGTAGTGTCGTGGTGGCGCAAGCAGCTATTCCCGCCATGGGGTGG
CTGAGCCTACCCTTCCTTCCTGAATCCCCATACTGGCTACTTCGCCGTGG
CCGTCGTGCTGCCGCCATCACCAGCCTGCGCCGGCTGCATGCCCTGGATG
CCGCTGCCGCTGAGGCCGAAATCATTTCCATTGAACAACAACTCGCACTG
CAGCAACAGCAACAACAACAAGAGAAGGAGCTCGCATCCTGGATGGCCTG
CTTCACAGACCCCATCCACTTCCGTCGGACTCTCATCGCTGTGGGCGCGC
AGATCTTCCAGCAGGCCCAGGGAATCTCCTTCGCGGCCAACTATCAGGCC
GTTTTTCTGGAACAGATCGGATTCCGCCAGGTCCTCTTGATGTCGGTGAT
TGTCTATATCATCGGCATAGTCGGCAATCTGACGGGGATGTTCATGGCTG
ACCGCCTGGGTCGTCGTAACGTGCTCCTCCCGGCATCCGGCATCCTCGGA
TCTTGTATGCTGACCATTAGCGGCCTCACCACCCCCTCCACATCCTCATC
TTCCCTCTCCATCGCGGTGGTGGTCATGCTCATGCTTTGGTTCTTTACCT
TCCAGAGCACATGGGGTCCGTTGGCCTGGGCAATCACCGCCGAAATCCCA
CCCACAGGAACCGCCGTCCGCGAGAAGATGGTTACGCTGGCGGGGTTTTC
GGCGTACGGCACCGGATTGATCATCGTCTTTGTGAATCCCTACACTCAGG
CCGCTATTGGGGGTAAGGTAGCCTTCATCTACGGCGCACTGTCCGTCGTT
GCGGCGGTATTTGTGTGGCTGTTTGTACCGGAGACCAAACGGCGTTCGTT
GGAGGAGATTGACGAGATGTTCGTCGCCCGAGTGCCGCCGCGTGAATTCG
GCATCTATCAGTGCCAGAGCGGTGCATTCGATGCAGAGAAAACCGTGGAT
GGCAAAACGTCAGTGGATGAAGAATGTGTCTGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:176437..177969+

>ATCC64974_96350-T1 ID=ATCC64974_96350-T1|Name=ATCC64974_96350-T1|organism=Aspergillus niger N402|type=CDS|length=1533bp|location=Sequence derived from alignment at OGUI01000017.1:176437..177969+ (Aspergillus niger N402)
ATGTCATCTTCCAACCCTCCACGGGAGGTCCCCTGGCTCATCTGGGTCGT
GGCTATCTTTGGCTCCGTCTCATCCGCGGGCTTTGGCTTTGATCAGGGCT
GGTGGGCAAGTATTATGAGTTCGACGCAATTTACCCGTGTCTTTGGCTCC
TACGACCCAGCCCAGCAGGCCTGGTCCCTCAGCGATCGACAGCAGTCCCT
CGGCACGGGTCTGGGCTATGTAGGGGTCATCCTCGGGTTGGTGTGCGGCA
CACCACTGAACGAAAAATTTGGACGACGGAACAGTCTCTGGCTGCAGTCG
GTGGTGGTGACTGCTGGGGTCGCCATTGAAGCATCCTGCCAGGACAGCTA
CGCGCAATTCCTGGTGGGCAAGGCAGTCGTCTACTTCGCCGGTGGCATCG
CCTCAACGGTCATTCCGGTCTACCAAGGAGAGTGCGCACCTCAGCACCTC
CGAGGAATGATGACGAGTCTATACAATGCCTTCCTGATGGTAGGCGGCTT
TTGTGCCGCCCTCATCGTCTACCTCTGTCGCCATGTACCGAGCGACTGGG
CCTGGCGTAGTGTCGTGGTGGCGCAAGCAGCTATTCCCGCCATGGGGTGG
CTGAGCCTACCCTTCCTTCCTGAATCCCCATACTGGCTACTTCGCCGTGG
CCGTCGTGCTGCCGCCATCACCAGCCTGCGCCGGCTGCATGCCCTGGATG
CCGCTGCCGCTGAGGCCGAAATCATTTCCATTGAACAACAACTCGCACTG
CAGCAACAGCAACAACAACAAGAGAAGGAGCTCGCATCCTGGATGGCCTG
CTTCACAGACCCCATCCACTTCCGTCGGACTCTCATCGCTGTGGGCGCGC
AGATCTTCCAGCAGGCCCAGGGAATCTCCTTCGCGGCCAACTATCAGGCC
GTTTTTCTGGAACAGATCGGATTCCGCCAGGTCCTCTTGATGTCGGTGAT
TGTCTATATCATCGGCATAGTCGGCAATCTGACGGGGATGTTCATGGCTG
ACCGCCTGGGTCGTCGTAACGTGCTCCTCCCGGCATCCGGCATCCTCGGA
TCTTGTATGCTGACCATTAGCGGCCTCACCACCCCCTCCACATCCTCATC
TTCCCTCTCCATCGCGGTGGTGGTCATGCTCATGCTTTGGTTCTTTACCT
TCCAGAGCACATGGGGTCCGTTGGCCTGGGCAATCACCGCCGAAATCCCA
CCCACAGGAACCGCCGTCCGCGAGAAGATGGTTACGCTGGCGGGGTTTTC
GGCGTACGGCACCGGATTGATCATCGTCTTTGTGAATCCCTACACTCAGG
CCGCTATTGGGGGTAAGGTAGCCTTCATCTACGGCGCACTGTCCGTCGTT
GCGGCGGTATTTGTGTGGCTGTTTGTACCGGAGACCAAACGGCGTTCGTT
GGAGGAGATTGACGAGATGTTCGTCGCCCGAGTGCCGCCGCGTGAATTCG
GCATCTATCAGTGCCAGAGCGGTGCATTCGATGCAGAGAAAACCGTGGAT
GGCAAAACGTCAGTGGATGAAGAATGTGTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_96350ATCC64974_96350Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96350-T1.exon1ATCC64974_96350-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96350-T1.cdsATCC64974_96350-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96350-T1ATCC64974_96350-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:176437..177969 +
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