You are here

Home

ATCC64974_98320-T1, ATCC64974_98320-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_98320-T1
Unique NameATCC64974_98320-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:774099..775180+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_98320-T1 ID=ATCC64974_98320-T1|Name=ATCC64974_98320-T1|organism=Aspergillus niger N402|type=mRNA|length=1082bp|location=Sequence derived from alignment at OGUI01000017.1:774099..775180+ (Aspergillus niger N402)
ATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAATCAT
CATCGGCAATCCCCTCGATGTCATCAAAGTGCGGTTGCAGGCAGGAAGCA
CTCCAGATGTCGCCGCCTCAACCACATCCCAGCAACTGAGTCGCTTTGAT
AGCGCTACTTCTCTTGTTCGAGGTTTGCAAATCTTCCGATCATGTAAATT
ACGCGTCTAGTATTAACCGTTTCACCAGGCGCCGCTGCACCAATACTCGG
ATATGGGGCCCTCAATGCACTACTCTTTGTGGCTTATAACCGATCCTTGA
AGTTCCTGGATAGTTCAATCATTGACCCTACAAACCCACAAGGTGTCCCC
TTAAGCAAGATCTGGCTTGCCGGTGCGGCAGGCGGGGTGGCCAGCTGGAC
TGTGTCATCTCCGACGGAGTTCATCAAATGTAGGGCCCAGCTTGACTCAC
GACCCGGGGTGTCGTCATGGACAGTTGCAAAAGACATTGTCCGAACACGC
GGCTGGACGGGCCTTTATTACGGAGGAGGGGTCACTTGTGCTAGAGATGC
AATTGGCTATGGGTTTTAGTATGTGAATCCCTTCCCCGGATCATCCCCCG
CTATTTCATTGCGGCTCTTCACGGAGTATTGACATACATTCTTCTCTGCA
GCTTTTGGTCTTACGAGTACTGCAAGCGGCTTACGGCCTCTAATGACGAT
GATGCGACCATGACTGCTACGAAAGTCTTATTATGCGGTGGTATTGCTGG
AATTGTTACCTGGGCATCTGTCTTCCCATTAGATGTGATCAAGACAAGAC
TGCAGGCGAGGACGATTGAATTGTCCCCAGAACATCGCCCCTTGGTGCAG
CCCTCAGCCAAGCCATACACCGCAAGCTCCATTCAAATTGCCAAAGAAGC
TTATCTCAATGAAGGACTCAAAGCTTTCTATCGTGGCCTAGGAGTTTGTA
GTGTGAGGGCCTTCATAGTCAATGCTGTTCAGGTATGTTAATCTGAGCTT
GAAATGTTGTACCGCATTGCTAACGATCCATTCCAAGTGGGCGGCATACG
AGTGGCTGATGAAGTATTTACAAAATCCATAA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:774099..775180+

>ATCC64974_98320-T1 ID=ATCC64974_98320-T1|Name=ATCC64974_98320-T1|organism=Aspergillus niger N402|type=CDS|length=3552bp|location=Sequence derived from alignment at OGUI01000017.1:774099..775180+ (Aspergillus niger N402)
ATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAATCAT
CATCGGCAATCCCCTCGATGTCATCAAAGTGCGGTTGCAGGCAGGAAGCA
CTCCAGATGTCGCCGCCTCAACCACATCCCAGCAACTGAGTCGCTTTGAT
AGCGCTACTTCTCTTGTTCGAGGCGCCGCTGCACCAATACTCGGATATGG
GGCCCTCAATGCACTACTCTTTGTGGCTTATAACCGATCCTTGAAGTTCC
TGGATAGTTCAATCATTGACCCTACAAACCCACAAGGTGTCCCCTTAAGC
AAGATCTGGCTTGCCGGTGCGGCAGGCGGGGTGGCCAGCTGGACTGTGTC
ATCTCCGACGGAGTTCATCAAATGTAGGGCCCAGCTTGACTCACGACCCG
GGGTGTCGTCATGGACAGTTGCAAAAGACATTGTCCGAACACGCGGCTGG
ACGGGCCTTTATTACGGAGGAGGGGTCACTTGTGCTAGAGATGCAATTGG
CTATGGGTTTTACTTTTGGTCTTACGAGTACTGCAAGCGGCTTACGGCCT
CTAATGACGATGATGCGACCATGACTGCTACGAAAGTCTTATTATGCGGT
GGTATTGCTGGAATTGTTACCTGGGCATCTGTCTTCCCATTAGATGTGAT
CAAGACAAGACTGCAGGCGAGGACGATTGAATTGTCCCCAGAACATCGCC
CCTTGGTGCAGCCCTCAGCCAAGCCATACACCGCAAGCTCCATTCAAATT
GCCAAAGAAGCTTATCTCAATGAAGGACTCAAAGCTTTCTATCGTGGCCT
AGGAGTTTGTAGTGTGAGGGCCTTCATAGTCAATGCTGTTCAGTGGGCGG
CATACGAGTGGCTGATGAAGTATTTACAAAATCCATAAATGTCTTCCGAC
TTCTGGGCTGGCTACCTTAGCGGTGCCATTGGAATCATCATCGGCAATCC
CCTCGATGTCATCAAAGTGCGGTTGCAGGCAGGAAGCACTCCAGATGTCG
CCGCCTCAACCACATCCCAGCAACTGAGTCGCTTTGATAGCGCTACTTCT
CTTGTTCGAGGCGCCGCTGCACCAATACTCGGATATGGGGCCCTCAATGC
ACTACTCTTTGTGGCTTATAACCGATCCTTGAAGTTCCTGGATAGTTCAA
TCATTGACCCTACAAACCCACAAGGTGTCCCCTTAAGCAAGATCTGGCTT
GCCGGTGCGGCAGGCGGGGTGGCCAGCTGGACTGTGTCATCTCCGACGGA
GTTCATCAAATGTAGGGCCCAGCTTGACTCACGACCCGGGGTGTCGTCAT
GGACAGTTGCAAAAGACATTGTCCGAACACGCGGCTGGACGGGCCTTTAT
TACGGAGGAGGGGTCACTTGTGCTAGAGATGCAATTGGCTATGGGTTTTA
CTTTTGGTCTTACGAGTACTGCAAGCGGCTTACGGCCTCTAATGACGATG
ATGCGACCATGACTGCTACGAAAGTCTTATTATGCGGTGGTATTGCTGGA
ATTGTTACCTGGGCATCTGTCTTCCCATTAGATGTGATCAAGACAAGACT
GCAGGCGAGGACGATTGAATTGTCCCCAGAACATCGCCCCTTGGTGCAGC
CCTCAGCCAAGCCATACACCGCAAGCTCCATTCAAATTGCCAAAGAAGCT
TATCTCAATGAAGGACTCAAAGCTTTCTATCGTGGCCTAGGAGTTTGTAG
TGTGAGGGCCTTCATAGTCAATGCTGTTCAGTGGGCGGCATACGAGTGGC
TGATGAAGTATTTACAAAATCCATAAATGTCTTCCGACTTCTGGGCTGGC
TACCTTAGCGGTGCCATTGGAATCATCATCGGCAATCCCCTCGATGTCAT
CAAAGTGCGGTTGCAGGCAGGAAGCACTCCAGATGTCGCCGCCTCAACCA
CATCCCAGCAACTGAGTCGCTTTGATAGCGCTACTTCTCTTGTTCGAGGC
GCCGCTGCACCAATACTCGGATATGGGGCCCTCAATGCACTACTCTTTGT
GGCTTATAACCGATCCTTGAAGTTCCTGGATAGTTCAATCATTGACCCTA
CAAACCCACAAGGTGTCCCCTTAAGCAAGATCTGGCTTGCCGGTGCGGCA
GGCGGGGTGGCCAGCTGGACTGTGTCATCTCCGACGGAGTTCATCAAATG
TAGGGCCCAGCTTGACTCACGACCCGGGGTGTCGTCATGGACAGTTGCAA
AAGACATTGTCCGAACACGCGGCTGGACGGGCCTTTATTACGGAGGAGGG
GTCACTTGTGCTAGAGATGCAATTGGCTATGGGTTTTACTTTTGGTCTTA
CGAGTACTGCAAGCGGCTTACGGCCTCTAATGACGATGATGCGACCATGA
CTGCTACGAAAGTCTTATTATGCGGTGGTATTGCTGGAATTGTTACCTGG
GCATCTGTCTTCCCATTAGATGTGATCAAGACAAGACTGCAGGCGAGGAC
GATTGAATTGTCCCCAGAACATCGCCCCTTGGTGCAGCCCTCAGCCAAGC
CATACACCGCAAGCTCCATTCAAATTGCCAAAGAAGCTTATCTCAATGAA
GGACTCAAAGCTTTCTATCGTGGCCTAGGAGTTTGTAGTGTGAGGGCCTT
CATAGTCAATGCTGTTCAGTGGGCGGCATACGAGTGGCTGATGAAGTATT
TACAAAATCCATAAATGTCTTCCGACTTCTGGGCTGGCTACCTTAGCGGT
GCCATTGGAATCATCATCGGCAATCCCCTCGATGTCATCAAAGTGCGGTT
GCAGGCAGGAAGCACTCCAGATGTCGCCGCCTCAACCACATCCCAGCAAC
TGAGTCGCTTTGATAGCGCTACTTCTCTTGTTCGAGGCGCCGCTGCACCA
ATACTCGGATATGGGGCCCTCAATGCACTACTCTTTGTGGCTTATAACCG
ATCCTTGAAGTTCCTGGATAGTTCAATCATTGACCCTACAAACCCACAAG
GTGTCCCCTTAAGCAAGATCTGGCTTGCCGGTGCGGCAGGCGGGGTGGCC
AGCTGGACTGTGTCATCTCCGACGGAGTTCATCAAATGTAGGGCCCAGCT
TGACTCACGACCCGGGGTGTCGTCATGGACAGTTGCAAAAGACATTGTCC
GAACACGCGGCTGGACGGGCCTTTATTACGGAGGAGGGGTCACTTGTGCT
AGAGATGCAATTGGCTATGGGTTTTACTTTTGGTCTTACGAGTACTGCAA
GCGGCTTACGGCCTCTAATGACGATGATGCGACCATGACTGCTACGAAAG
TCTTATTATGCGGTGGTATTGCTGGAATTGTTACCTGGGCATCTGTCTTC
CCATTAGATGTGATCAAGACAAGACTGCAGGCGAGGACGATTGAATTGTC
CCCAGAACATCGCCCCTTGGTGCAGCCCTCAGCCAAGCCATACACCGCAA
GCTCCATTCAAATTGCCAAAGAAGCTTATCTCAATGAAGGACTCAAAGCT
TTCTATCGTGGCCTAGGAGTTTGTAGTGTGAGGGCCTTCATAGTCAATGC
TGTTCAGTGGGCGGCATACGAGTGGCTGATGAAGTATTTACAAAATCCAT
AA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_98320ATCC64974_98320Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98320-T1.exon1ATCC64974_98320-T1.exon1Aspergillus niger N402exon
ATCC64974_98320-T1.exon2ATCC64974_98320-T1.exon2Aspergillus niger N402exon
ATCC64974_98320-T1.exon3ATCC64974_98320-T1.exon3Aspergillus niger N402exon
ATCC64974_98320-T1.exon4ATCC64974_98320-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98320-T1.cdsATCC64974_98320-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98320-T1ATCC64974_98320-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023395
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR002067
DBxrefPFAM:PF00153
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:774099..775180 +
Powered by Drupal