You are here

Home

ATCC64974_105170-T2, ATCC64974_105170-T2 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_105170-T2
Unique NameATCC64974_105170-T2
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:2982693..2985158+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_105170-T2 ID=ATCC64974_105170-T2|Name=ATCC64974_105170-T2|organism=Aspergillus niger N402|type=mRNA|length=2466bp|location=Sequence derived from alignment at OGUI01000017.1:2982693..2985158+ (Aspergillus niger N402)
ATGGTGCAGCAGGACGAGCGGGAAGTCGCCGAGCTGGTCACCAGCCTGGA
GGCTGCCAGCAGGAAAGGCACAGCTCATGGGAAGAAGTCGGGGTTCAAGT
GCAAGAAATCTACCTTCGACGTTGAAAAAGCAGACAAAATCCAGGTGCAT
TCGTGGAAGTTCATGGACTGGGATTATAAACGCGACGATCTGCCGACCTA
TGCGCGAGGGCTGTTTACCACTCAGAGGAAGGATGGCACCCAGGAGATTG
CGGTTCGCGGATACGACAAGTTCTTCAACGTGGACGAGGTGAATGACACA
AAGTGGAGGAACATCGAGATGAATACTAGGGGTCCCTACGAGCTCAGTGT
GAAGGAGAACGGATGTATCATTTTCATTTCTGGTCTTGAGGATGGCACCT
TGTTGGTCTGCAGCAAGCATTCCACGGGTGTTCGGTCTGATACAAACCTC
AGCCATGCTCAAGCTGGTGAACGCTGGGTCGAGCGACATGTCAGTTCTGT
TGGAAGAAATGTAAAGGACTTGGCACGAGAGCTTCGCAGACTCAATGTCA
CCGCAGTAGGCGAGCTCTGTGACGACACCTTCGAGGAGCATGTCCTTGCT
TACGACGAAAGCGCTTCGGGCATCTATCTGCATGGACTCAACTTCAACGT
GCCCCAATTTGCCACGCAGCCTAGCTCGGAGGTACACAAGTTTGCGGATG
CATGGGGATTTAAGAAGGCCAACTTTGTCGTGTATGAAGACCTCGACCAG
GTCAAGAAATTCCTCGACAATTGCGCCGAAACAGGCACCTGGGATGGCCG
GGAGACCGAGGGGTTTGTGGTCCGATGCCACATGGGCGATAGGGGACGTC
CCCCCTACCGGGATTGGTTCTTCAAGTACAAGTTCGAAGAGCCCTACTTG
ATGTACAGGCAATGGCGGGAGTGCACGAAGGCAGTCATTGCAGGAAAGGT
TCCTAACATCAAGAAGCACAAGAAGATCACTGAGGAGTATCTCCATTACG
CGCGAAGACAGCTCGCTAAAACCCCTGGTCTCGCACAACAGTACCAGCAA
AACCACGGCATCATTTCTTTGAGAGAGGGTTTCTTGCAAGAGAGAGGCCT
CAACGGATCTGAGATCATCCAAATGGAGTCTGACGAAGCCGGCGATGTGA
CGCACGACGTAATTCTTGTCCCCGTTGCTTCCCTGGGCTGCGGCAAGACG
ACAGTGGCTTTGGCTCTTTGCAAATTGTTTGGATGGGGACAGGTCCAGAA
CGATAACATTCCGAAACAGAAGAACAAGCCAAAGAAATTCTCCTTGGACA
TTACAAACCTCCTTGCCCAACATCCTGTGGTGATAGCAGACCGGAACAAC
CACATGCGACGCGAACGGCAGCAACTTATAGACGATGTGTCGGTTGTAAT
TTCCAAAGCTCGCTATGTCGCACTCCAGTACGTCCACGAACCTAAAGGAC
AATTACTTCCTGGCATCCGTGAGGTAACGCGGAGACGAGTCCTTGACCGT
GGAGACAACCACCAGACCATCCGGGCGGGAAGCAAGAATCCGGAGGAGGT
CATCGGAATCATGGAAGGTTTCCTGAACCGGTTCGAGGCTGTTGACACCG
ACCGTGAGCCAGACTGCTACTTCGACCAAGTAATTGACCTGGATGTTGGT
GCTTCTTCCCGGGAGAATCTGGAGACAGTGGTGAAAGCGTTACATTCATT
CTATCCCAAGCTCGTGAAAGAAGTTCCGACAGCAGAGCAACTGGATGACG
CCATCTACTGGTCGATGAACGAATACCAAGTGCAGCTGGATTGGAGCCAT
CAATACGGATCCCAGAAACCGAAGAACAAGAACAAGAACCAGAATCAGAA
CCCCGGCAGCCCTGCACCCACAGCCGGCCCCACCCCCGAAGACCTGGCCA
AGAAGATCGAGTATTTCAACATCTCCCTACCCGCTGCAGAGGTGAAAAAT
ATCCTCGAGTCTTTGTTCCCTCCGTCTACATCCCCCGAAAAAGCACGTCT
CTACAGACAGCTCATCAACAGCAGACGCGTGCAGCCCGCCTTCCATGTGA
CGTTGATCCACCGCGCCTCGAAAAAAGAACATCCCGGTATCTGGGACGAA
TACGTCCGCCAGTACATCGAGAAGATGAAGAGCAAGCCCGAGTCTGATCC
CACCATCACCCCAACGTTGGCTCCGGCTCGCGTACGTCTTGAGCGTCTTA
TATGGGACAACCGTCTCATGGCATTTGTAGCACGGATATTCCCCCCAGAT
GATCAGAACCTGGCAGAATGGCCGTGCGCAAACGAAATACCCCATGTCAC
TGTGGGAACTGCGTCTCCCGATGTGAAGCCCAAAGAGAGCAACGATCTGT
TGAAGTGGTGGCATGAAGTTGGCTCGGGAGGAGAAACAGGGCTTTGGGAA
GCCGAGATCCCAGGCGTGAAGGTCGTACAGGGAACAGTAGGTGTGGTGAT
GAGTCGAGGCAAATAA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:2982693..2985158+

>ATCC64974_105170-T2 ID=ATCC64974_105170-T2|Name=ATCC64974_105170-T2|organism=Aspergillus niger N402|type=CDS|length=3270bp|location=Sequence derived from alignment at OGUI01000017.1:2982693..2985158+ (Aspergillus niger N402)
ATGGTGCAGCAGGACGAGCGGGAAGTCGCCGAGCTGGTCACCAGCCTGGA
GGCTGCCAGCAGGAAAGGCACAGCTCATGGGAAGAAGTCGGGGTTCAAGT
GCAAGAAATCTACCTTCGACGTTGAAAAAGCAGACAAAATCCAGGTGCAT
TCGTGGAAGTTCATGGACTGGGATTATAAACGCGACGATCTGCCGACCTA
TGCGCGAGGGCTGTTTACCACTCAGAGGAAGGATGGCACCCAGGAGATTG
CGGTTCGCGGATACGACAAGTTCTTCAACGTGGACGAGGTGAATGACACA
AAGTGGAGGAACATCGAGATGAATACTAGGGGTCCCTACGAGCTCAGTGT
GAAGGAGAACGGATGTATCATTTTCATTTCTGGTCTTGAGGATGGCACCT
TGTTGGTCTGCAGCAAGCATTCCACGGGTGTTCGGTCTGATACAAACCTC
AGCCATGCTCAAGCTGGTGAACGCTGGGTCGAGCGACATGTCAGTTCTGT
TGGAAGAAATGTAAAGGACTTGGCACGAGAGCTTCGCAGACTCAATGTCA
CCGCAGTAGGCGAGCTCTGTGACGACACCTTCGAGGAGCATGTCCTTGCT
TACGACGAAAGCGCTTCGGGCATCTATCTGCATGGACTCAACTTCAACGT
GCCCCAATTTGCCACGCAGCCTAGCTCGGAGGTACACAAGTTTGCGGATG
CATGGGGATTTAAGAAGGCCAACTTTGTCGTGTATGAAGACCTCGACCAG
GTCAAGAAATTCCTCGACAATTGCGCCGAAACAGGCACCTGGGATGGCCG
GGAGACCGAGGGGTTTGTGGTCCGATGCCACATGGGCGATAGGGGACGTC
CCCCCTACCGGGATTGGTTCTTCAAGTACAAGTTCGAAGAGCCCTACTTG
ATGTACAGGCAATGGCGGGAGTGCACGAAGGCAGTCATTGCAGGAAAGGT
TCCTAACATCAAGAAGCACAAGAAGATCACTGAGGAGTATCTCCATTACG
CGCGAAGACAGCTCGCTAAAACCCCTGGTCTCGCACAACAGTACCAGCAA
AACCACGGCATCATTTCTTTGAGAGAGGGTTTCTTGCAAGAGAGAGGCCT
CAACGGATCTGAGATCATCCAAATGGAGTCTGACGAAGCCGGCGATGTGA
CGCACGACGTAATTCTTGTCCCCGTTGCTTCCCTGGGCTGCGGCAAGACG
ACAGTGGCTTTGGCTCTTTGCAAATTGTTTGGATGGGGACAGGTCCAGAA
CGATAACATTCCGAAACAGAAGAACAAGCCAAAGAAATTCTCCTTGGACA
TTACAAACCTCCTTGCCCAACATCCTGTGGTGATAGCAGACCGGAACAAC
CACATGCGACGCGAACGGCAGCAACTTATAGACGATGTGTCGGTTGTAAT
TTCCAAAGCTCGCTATGTCGCACTCCAGTACGTCCACGAACCTAAAGGAC
AATTACTTCCTGGCATCCGTGAGGTAACGCGGAGACGAGTCCTTGACCGT
GGAGACAACCACCAGACCATCCGGGCGGGAAGCAAGAATCCGGAGGAGGT
CATCGGAATCATGGAAGGTTTCCTGAACCGGTTCGAGGCTGTTGACACCG
ACCGTGAGCCAGACTGCTACTTCGACCAATGGTGAATGGTGCAGCAGGAC
GAGCGGGAAGTCGCCGAGCTGGTCACCAGCCTGGAGGCTGCCAGCAGGAA
AGGCACAGCTCATGGGAAGAAGTCGGGGTTCAAGTGCAAGAAATCTACCT
TCGACGTTGAAAAAGCAGACAAAATCCAGGTGCATTCGTGGAAGTTCATG
GACTGGGATTATAAACGCGACGATCTGCCGACCTATGCGCGAGGGCTGTT
TACCACTCAGAGGAAGGATGGCACCCAGGAGATTGCGGTTCGCGGATACG
ACAAGTTCTTCAACGTGGACGAGGTGAATGACACAAAGTGGAGGAACATC
GAGATGAATACTAGGGGTCCCTACGAGCTCAGTGTGAAGGAGAACGGATG
TATCATTTTCATTTCTGGTCTTGAGGATGGCACCTTGTTGGTCTGCAGCA
AGCATTCCACGGGTGTTCGGTCTGATACAAACCTCAGCCATGCTCAAGCT
GGTGAACGCTGGGTCGAGCGACATGTCAGTTCTGTTGGAAGAAATGTAAA
GGACTTGGCACGAGAGCTTCGCAGACTCAATGTCACCGCAGTAGGCGAGC
TCTGTGACGACACCTTCGAGGAGCATGTCCTTGCTTACGACGAAAGCGCT
TCGGGCATCTATCTGCATGGACTCAACTTCAACGTGCCCCAATTTGCCAC
GCAGCCTAGCTCGGAGGTACACAAGTTTGCGGATGCATGGGGATTTAAGA
AGGCCAACTTTGTCGTGTATGAAGACCTCGACCAGGTCAAGAAATTCCTC
GACAATTGCGCCGAAACAGGCACCTGGGATGGCCGGGAGACCGAGGGGTT
TGTGGTCCGATGCCACATGGGCGATAGGGGACGTCCCCCCTACCGGGATT
GGTTCTTCAAGTACAAGTTCGAAGAGCCCTACTTGATGTACAGGCAATGG
CGGGAGTGCACGAAGGCAGTCATTGCAGGAAAGGTTCCTAACATCAAGAA
GCACAAGAAGATCACTGAGGAGTATCTCCATTACGCGCGAAGACAGCTCG
CTAAAACCCCTGGTCTCGCACAACAGTACCAGCAAAACCACGGCATCATT
TCTTTGAGAGAGGGTTTCTTGCAAGAGAGAGGCCTCAACGGATCTGAGAT
CATCCAAATGGAGTCTGACGAAGCCGGCGATGTGACGCACGACGTAATTC
TTGTCCCCGTTGCTTCCCTGGGCTGCGGCAAGACGACAGTGGCTTTGGCT
CTTTGCAAATTGTTTGGATGGGGACAGGTCCAGAACGATAACATTCCGAA
ACAGAAGAACAAGCCAAAGAAATTCTCCTTGGACATTACAAACCTCCTTG
CCCAACATCCTGTGGTGATAGCAGACCGGAACAACCACATGCGACGCGAA
CGGCAGCAACTTATAGACGATGTGTCGGTTGTAATTTCCAAAGCTCGCTA
TGTCGCACTCCAGTACGTCCACGAACCTAAAGGACAATTACTTCCTGGCA
TCCGTGAGGTAACGCGGAGACGAGTCCTTGACCGTGGAGACAACCACCAG
ACCATCCGGGCGGGAAGCAAGAATCCGGAGGAGGTCATCGGAATCATGGA
AGGTTTCCTGAACCGGTTCGAGGCTGTTGACACCGACCGTGAGCCAGACT
GCTACTTCGACCAATGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006388tRNA splicing, via endonucleolytic cleavage and ligation
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003972RNA ligase (ATP) activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_105170ATCC64974_105170Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105170-T2.exon1ATCC64974_105170-T2.exon1Aspergillus niger N402exon
ATCC64974_105170-T2.exon2ATCC64974_105170-T2.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105170-T2.cdsATCC64974_105170-T2.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_105170-T2ATCC64974_105170-T2-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR015966
DBxrefInterPro:IPR019039
DBxrefPFAM:PF08303
DBxrefPFAM:PF09511
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:2982693..2985158 +
Powered by Drupal