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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:3078558..3079949+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_105470-T1 ID=ATCC64974_105470-T1|Name=ATCC64974_105470-T1|organism=Aspergillus niger N402|type=mRNA|length=1392bp|location=Sequence derived from alignment at OGUI01000017.1:3078558..3079949+ (Aspergillus niger N402)
ATGAGCGTTATACTTTGCACTGGTATGCAATTCCCTCGGCGCTAGCTGGT
CTCTAACATCTTCTGTCTGTCCCAGTGGGAATTGACTGACCAATGTTCTA
TAACTCGTGATGTCCAGCGGGCTACGACCACACCATTCGGTATGTCAGAC
TGTGTTACTTGCGCCCCGAAAAGTAGACGTCGCTAACTTGGCCCAGGTTT
TGGGAGGCCTTGTCGGGAATTTGCTCGCGCACTATACAGCATCCCGATTC
CCAAGTTAATCGATTATGCATCACCCCCGACAAACGGTACTTGGCAGCCG
CCGGTCACAACAATGTCAAGCTGTATGACATCAAATCTACCAATCCCAAT
CCAGTCATGACCTTCGACGGCCATACAAACAACATCACTGGCGTCGCGTT
TCACTGCGAGGGGAAGTGGATGGTTACCAGCTCGGAGGATGGTACGGTTA
AAGTCTGGGATACCCGTACAGGCAGCCTGCAGCGCAATTACGCGCATAAA
GCTCCAGTCAACGATGTTGTAATCCACCCCAACCAAGGCGAACTTATTAG
TGGGGATCGCGCTGGTATCGTCCGGGTTTGGGACCTGGGTGAAAGCGTCT
GCACCCACCAGCTAATTCCCGAGGACGACGTTGCGGTTCACAGTGTTAGT
GTCGCAAGCGATGGGTCTTTGCTTTGCGCTGGAAACAAGAAGGTAGAAAG
GATTTTTATTCTTTACTCGTCTTCAGCGCTGACTTTGAGCGACCGATTTA
TAGGGTAATGTCTACATCTGGCGCATGATTCAAGACGCCGAAATAACGCG
CATCGTTCCGATATGTACCTTCCAGGCGCACAAGGACTACCTCACCCGCG
TTCTTCTCTCCCCAGATGTCAAGCATCTCGCGACGTGCTCTGCCGACCAC
ACGGCCAAAGTATGGAACCTTGATCTTGATTACCCGCCGGCCAAGATTGC
CGCCGCCAACGCCGCCAAAGCTAAGGCCAGAGCCATTTCTTCGCCCGAAT
CGAATGACACCCCTTCTTCCCCAGAATCGACGCAACACGTGAACAACGCA
TCTCCCAACGGCACCGACTTTGAAGCCAACCCATTCAGTCTCTTCCAAGC
AGCGACACCTCCTGTCAATAACGAACCGCAGCAGACCTTCCCTGTACAAC
CGGACGGACCCCCCATGGACTCCGCAACAGGGACACTCTTCCTAGAGACC
ACGCTTGCCAATCACCAACGGTGGGTCTGGGATTGCGCTTTCTCCGCCGA
CTCTGCGTATCTCGTCACAGTATCCAGCGACCACTACGCCCGCTTATGGG
AGCTGGCTTCGGGCCAGATCATCCGTCAATACAGTGGCCATCACCGCGGG
GCGGTATGCGTAGCGCTGAACGATTATTCCGAGCCGCGTTGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:3078558..3079949+ >ATCC64974_105470-T1 ID=ATCC64974_105470-T1|Name=ATCC64974_105470-T1|organism=Aspergillus niger N402|type=CDS|length=4716bp|location=Sequence derived from alignment at OGUI01000017.1:3078558..3079949+ (Aspergillus niger N402)
ATGAGCGTTATACTTTGCACTGCGGGCTACGACCACACCATTCGGTTTTG
GGAGGCCTTGTCGGGAATTTGCTCGCGCACTATACAGCATCCCGATTCCC
AAGTTAATCGATTATGCATCACCCCCGACAAACGGTACTTGGCAGCCGCC
GGTCACAACAATGTCAAGCTGTATGACATCAAATCTACCAATCCCAATCC
AGTCATGACCTTCGACGGCCATACAAACAACATCACTGGCGTCGCGTTTC
ACTGCGAGGGGAAGTGGATGGTTACCAGCTCGGAGGATGGTACGGTTAAA
GTCTGGGATACCCGTACAGGCAGCCTGCAGCGCAATTACGCGCATAAAGC
TCCAGTCAACGATGTTGTAATCCACCCCAACCAAGGCGAACTTATTAGTG
GGGATCGCGCTGGTATCGTCCGGGTTTGGGACCTGGGTGAAAGCGTCTGC
ACCCACCAGCTAATTCCCGAGGACGACGTTGCGGTTCACAGTGTTAGTGT
CGCAAGCGATGGGTCTTTGCTTTGCGCTGGAAACAAGAAGGGTAATGTCT
ACATCTGGCGCATGATTCAAGACGCCGAAATAACGCGCATCGTTCCGATA
TGTACCTTCCAGGCGCACAAGGACTACCTCACCCGCGTTCTTCTCTCCCC
AGATGTCAAGCATCTCGCGACGTGCTCTGCCGACCACACGGCCAAAGTAT
GGAACCTTGATCTTGATTACCCGCCGGCCAAGATTGCCGCCGCCAACGCC
GCCAAAGCTAAGGCCAGAGCCATTTCTTCGCCCGAATCGAATGACACCCC
TTCTTCCCCAGAATCGACGCAACACGTGAACAACGCATCTCCCAACGGCA
CCGACTTTGAAGCCAACCCATTCAGTCTCTTCCAAGCAGCGACACCTCCT
GTCAATAACGAACCGCAGCAGACCTTCCCTGTACAACCGGACGGACCCCC
CATGGACTCCGCAACAGGGACACTCTTCCTAGAGACCACGCTTGCCAATC
ACCAACGGTGGGTCTGGGATTGCGCTTTCTCCGCCGACTCTGCGTATCTC
GTCACAGTATCCAGCGACCACTACGCCCGCTTATGGGAGCTGGCTTCGGG
CCAGATCATCCGTCAATACAGTGGCCATCACCGCGGGGCGGTATGCGTAG
CGCTGAACGATTATTCCGAGCCGCGTTGAATGAGCGTTATACTTTGCACT
GCGGGCTACGACCACACCATTCGGTTTTGGGAGGCCTTGTCGGGAATTTG
CTCGCGCACTATACAGCATCCCGATTCCCAAGTTAATCGATTATGCATCA
CCCCCGACAAACGGTACTTGGCAGCCGCCGGTCACAACAATGTCAAGCTG
TATGACATCAAATCTACCAATCCCAATCCAGTCATGACCTTCGACGGCCA
TACAAACAACATCACTGGCGTCGCGTTTCACTGCGAGGGGAAGTGGATGG
TTACCAGCTCGGAGGATGGTACGGTTAAAGTCTGGGATACCCGTACAGGC
AGCCTGCAGCGCAATTACGCGCATAAAGCTCCAGTCAACGATGTTGTAAT
CCACCCCAACCAAGGCGAACTTATTAGTGGGGATCGCGCTGGTATCGTCC
GGGTTTGGGACCTGGGTGAAAGCGTCTGCACCCACCAGCTAATTCCCGAG
GACGACGTTGCGGTTCACAGTGTTAGTGTCGCAAGCGATGGGTCTTTGCT
TTGCGCTGGAAACAAGAAGGGTAATGTCTACATCTGGCGCATGATTCAAG
ACGCCGAAATAACGCGCATCGTTCCGATATGTACCTTCCAGGCGCACAAG
GACTACCTCACCCGCGTTCTTCTCTCCCCAGATGTCAAGCATCTCGCGAC
GTGCTCTGCCGACCACACGGCCAAAGTATGGAACCTTGATCTTGATTACC
CGCCGGCCAAGATTGCCGCCGCCAACGCCGCCAAAGCTAAGGCCAGAGCC
ATTTCTTCGCCCGAATCGAATGACACCCCTTCTTCCCCAGAATCGACGCA
ACACGTGAACAACGCATCTCCCAACGGCACCGACTTTGAAGCCAACCCAT
TCAGTCTCTTCCAAGCAGCGACACCTCCTGTCAATAACGAACCGCAGCAG
ACCTTCCCTGTACAACCGGACGGACCCCCCATGGACTCCGCAACAGGGAC
ACTCTTCCTAGAGACCACGCTTGCCAATCACCAACGGTGGGTCTGGGATT
GCGCTTTCTCCGCCGACTCTGCGTATCTCGTCACAGTATCCAGCGACCAC
TACGCCCGCTTATGGGAGCTGGCTTCGGGCCAGATCATCCGTCAATACAG
TGGCCATCACCGCGGGGCGGTATGCGTAGCGCTGAACGATTATTCCGAGC
CGCGTTGAATGAGCGTTATACTTTGCACTGCGGGCTACGACCACACCATT
CGGTTTTGGGAGGCCTTGTCGGGAATTTGCTCGCGCACTATACAGCATCC
CGATTCCCAAGTTAATCGATTATGCATCACCCCCGACAAACGGTACTTGG
CAGCCGCCGGTCACAACAATGTCAAGCTGTATGACATCAAATCTACCAAT
CCCAATCCAGTCATGACCTTCGACGGCCATACAAACAACATCACTGGCGT
CGCGTTTCACTGCGAGGGGAAGTGGATGGTTACCAGCTCGGAGGATGGTA
CGGTTAAAGTCTGGGATACCCGTACAGGCAGCCTGCAGCGCAATTACGCG
CATAAAGCTCCAGTCAACGATGTTGTAATCCACCCCAACCAAGGCGAACT
TATTAGTGGGGATCGCGCTGGTATCGTCCGGGTTTGGGACCTGGGTGAAA
GCGTCTGCACCCACCAGCTAATTCCCGAGGACGACGTTGCGGTTCACAGT
GTTAGTGTCGCAAGCGATGGGTCTTTGCTTTGCGCTGGAAACAAGAAGGG
TAATGTCTACATCTGGCGCATGATTCAAGACGCCGAAATAACGCGCATCG
TTCCGATATGTACCTTCCAGGCGCACAAGGACTACCTCACCCGCGTTCTT
CTCTCCCCAGATGTCAAGCATCTCGCGACGTGCTCTGCCGACCACACGGC
CAAAGTATGGAACCTTGATCTTGATTACCCGCCGGCCAAGATTGCCGCCG
CCAACGCCGCCAAAGCTAAGGCCAGAGCCATTTCTTCGCCCGAATCGAAT
GACACCCCTTCTTCCCCAGAATCGACGCAACACGTGAACAACGCATCTCC
CAACGGCACCGACTTTGAAGCCAACCCATTCAGTCTCTTCCAAGCAGCGA
CACCTCCTGTCAATAACGAACCGCAGCAGACCTTCCCTGTACAACCGGAC
GGACCCCCCATGGACTCCGCAACAGGGACACTCTTCCTAGAGACCACGCT
TGCCAATCACCAACGGTGGGTCTGGGATTGCGCTTTCTCCGCCGACTCTG
CGTATCTCGTCACAGTATCCAGCGACCACTACGCCCGCTTATGGGAGCTG
GCTTCGGGCCAGATCATCCGTCAATACAGTGGCCATCACCGCGGGGCGGT
ATGCGTAGCGCTGAACGATTATTCCGAGCCGCGTTGAATGAGCGTTATAC
TTTGCACTGCGGGCTACGACCACACCATTCGGTTTTGGGAGGCCTTGTCG
GGAATTTGCTCGCGCACTATACAGCATCCCGATTCCCAAGTTAATCGATT
ATGCATCACCCCCGACAAACGGTACTTGGCAGCCGCCGGTCACAACAATG
TCAAGCTGTATGACATCAAATCTACCAATCCCAATCCAGTCATGACCTTC
GACGGCCATACAAACAACATCACTGGCGTCGCGTTTCACTGCGAGGGGAA
GTGGATGGTTACCAGCTCGGAGGATGGTACGGTTAAAGTCTGGGATACCC
GTACAGGCAGCCTGCAGCGCAATTACGCGCATAAAGCTCCAGTCAACGAT
GTTGTAATCCACCCCAACCAAGGCGAACTTATTAGTGGGGATCGCGCTGG
TATCGTCCGGGTTTGGGACCTGGGTGAAAGCGTCTGCACCCACCAGCTAA
TTCCCGAGGACGACGTTGCGGTTCACAGTGTTAGTGTCGCAAGCGATGGG
TCTTTGCTTTGCGCTGGAAACAAGAAGGGTAATGTCTACATCTGGCGCAT
GATTCAAGACGCCGAAATAACGCGCATCGTTCCGATATGTACCTTCCAGG
CGCACAAGGACTACCTCACCCGCGTTCTTCTCTCCCCAGATGTCAAGCAT
CTCGCGACGTGCTCTGCCGACCACACGGCCAAAGTATGGAACCTTGATCT
TGATTACCCGCCGGCCAAGATTGCCGCCGCCAACGCCGCCAAAGCTAAGG
CCAGAGCCATTTCTTCGCCCGAATCGAATGACACCCCTTCTTCCCCAGAA
TCGACGCAACACGTGAACAACGCATCTCCCAACGGCACCGACTTTGAAGC
CAACCCATTCAGTCTCTTCCAAGCAGCGACACCTCCTGTCAATAACGAAC
CGCAGCAGACCTTCCCTGTACAACCGGACGGACCCCCCATGGACTCCGCA
ACAGGGACACTCTTCCTAGAGACCACGCTTGCCAATCACCAACGGTGGGT
CTGGGATTGCGCTTTCTCCGCCGACTCTGCGTATCTCGTCACAGTATCCA
GCGACCACTACGCCCGCTTATGGGAGCTGGCTTCGGGCCAGATCATCCGT
CAATACAGTGGCCATCACCGCGGGGCGGTATGCGTAGCGCTGAACGATTA
TTCCGAGCCGCGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_105470-T1 | ATCC64974_105470-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092638XA |
| DBxref | InterPro:IPR011047 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| Product | RNase P and RNase MRP subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:3078558..3079949 + |
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