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ATCC64974_107940-T1, ATCC64974_107940-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_107940-T1
Unique NameATCC64974_107940-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:3853303..3854634+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_107940-T1 ID=ATCC64974_107940-T1|Name=ATCC64974_107940-T1|organism=Aspergillus niger N402|type=mRNA|length=1332bp|location=Sequence derived from alignment at OGUI01000017.1:3853303..3854634+ (Aspergillus niger N402)
ATGCCACCGATACCCCCTTCCCTCCGCGCCGCCCGCGCTCAATGGCGCAC
CTGCGCCCAACATCTCCACGCATCCACCCACCCCCCCAAAACCCGCCTCT
ACAGCACAACCCGCACCCTCCGCTCCAGCACCACTGCCAGCAGCACCACT
ACCGCCAGCAGCAACCCCCTCCGCAACGCCCGGCCCATCCGCAGCCGCGA
GCAGGACCTCGCGCGGAGCAAACGCTCGATGTACATCTCCGCGACGGGGA
TGATCGTATGCGCAATCGGGATGTACGGGGTGATCAAAGCGGACGTGTTC
GGGCTGGAACAAGCAACCCCCACCAGTACCACCGAGGGCATTGACATCGA
AAACGCCACCAGCAGCAACAGCAGTGCGACCAAACTCGACGGCCCAAGCA
CAGGCTTCCCGACGAAACCCACCCTAACGCACATCAAAGCCGCCGACGGC
ACAACCGACCAAGTGGAGACAGGAACGAGCACGATCCCACATTTCCCGGC
GGTGATTCATCTGCCGAAGTGGTTGGAGAGTGAGAATCCTCCTGCGTCTG
CGACGGATTTGCCGACGCAGAGTGGTACTGGTACTGGGGAAGGAGAAGGG
GAGGAATATCATCTTCTAGGGTTGGGGATTCGCACTGTCTCATTCCTCAA
TTTCCAGGTGTATGTGGTGGGGTTGTATGTTGCGAAGGAGGATTTGGCGG
AGCTGCAATCGCGACTTGTGCGCACGGCGGTGCATCCGCCTGGAAAGGGG
ACGGAGTCGGTGATTGATAATGAGGTGGGAGCTACGGCGGCGACGTCGTT
GGTGTCGATGGAGAGGGATAAGTTGAGGGAGTTGTTGTTGGATGCGGAGA
AGGGGGAGCAGGCGTGGGATATGTTGCTGAGGAAGGATGGGTTGAGGACG
GCGTTCCGGGTCGTGCCGACGAGGAATACGGATTTCTTGCATCTGAGGGA
TGGGTGGGTGAGGGGGATTACGGGTAGGGCGCAGAAGTATAATAAGGAGA
GTGGGGGAGAGTTTGAAGGGGAGGAGTTTGGACAGGCGATGGGGGAGTTT
AAGGGCCTGTTTGGAGGTGGGCAGAGGAAGAGTGTGCCCAAGGGACAGGT
GTTGGTATTGGCGAGAGGGGCGAAGGGACAGTTGGATGTGTTGGTACAAG
GTGGTGGTAGTGGGAAGGATGGAGTGCCGGACCGGTATCTGGGACGGGTG
AAGGATGAGAGGATCAGTCGGTTGGTGTGGATGAATTATTTGGCGGGGAA
GAATGTCTCCAGTGAGGGGGCCAGACAGAGTGTCGTGGATGGGATTATGG
GGGTGGTGGAGAGGCCAGTTGGGACTGTATAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:3853303..3854634+

>ATCC64974_107940-T1 ID=ATCC64974_107940-T1|Name=ATCC64974_107940-T1|organism=Aspergillus niger N402|type=CDS|length=1332bp|location=Sequence derived from alignment at OGUI01000017.1:3853303..3854634+ (Aspergillus niger N402)
ATGCCACCGATACCCCCTTCCCTCCGCGCCGCCCGCGCTCAATGGCGCAC
CTGCGCCCAACATCTCCACGCATCCACCCACCCCCCCAAAACCCGCCTCT
ACAGCACAACCCGCACCCTCCGCTCCAGCACCACTGCCAGCAGCACCACT
ACCGCCAGCAGCAACCCCCTCCGCAACGCCCGGCCCATCCGCAGCCGCGA
GCAGGACCTCGCGCGGAGCAAACGCTCGATGTACATCTCCGCGACGGGGA
TGATCGTATGCGCAATCGGGATGTACGGGGTGATCAAAGCGGACGTGTTC
GGGCTGGAACAAGCAACCCCCACCAGTACCACCGAGGGCATTGACATCGA
AAACGCCACCAGCAGCAACAGCAGTGCGACCAAACTCGACGGCCCAAGCA
CAGGCTTCCCGACGAAACCCACCCTAACGCACATCAAAGCCGCCGACGGC
ACAACCGACCAAGTGGAGACAGGAACGAGCACGATCCCACATTTCCCGGC
GGTGATTCATCTGCCGAAGTGGTTGGAGAGTGAGAATCCTCCTGCGTCTG
CGACGGATTTGCCGACGCAGAGTGGTACTGGTACTGGGGAAGGAGAAGGG
GAGGAATATCATCTTCTAGGGTTGGGGATTCGCACTGTCTCATTCCTCAA
TTTCCAGGTGTATGTGGTGGGGTTGTATGTTGCGAAGGAGGATTTGGCGG
AGCTGCAATCGCGACTTGTGCGCACGGCGGTGCATCCGCCTGGAAAGGGG
ACGGAGTCGGTGATTGATAATGAGGTGGGAGCTACGGCGGCGACGTCGTT
GGTGTCGATGGAGAGGGATAAGTTGAGGGAGTTGTTGTTGGATGCGGAGA
AGGGGGAGCAGGCGTGGGATATGTTGCTGAGGAAGGATGGGTTGAGGACG
GCGTTCCGGGTCGTGCCGACGAGGAATACGGATTTCTTGCATCTGAGGGA
TGGGTGGGTGAGGGGGATTACGGGTAGGGCGCAGAAGTATAATAAGGAGA
GTGGGGGAGAGTTTGAAGGGGAGGAGTTTGGACAGGCGATGGGGGAGTTT
AAGGGCCTGTTTGGAGGTGGGCAGAGGAAGAGTGTGCCCAAGGGACAGGT
GTTGGTATTGGCGAGAGGGGCGAAGGGACAGTTGGATGTGTTGGTACAAG
GTGGTGGTAGTGGGAAGGATGGAGTGCCGGACCGGTATCTGGGACGGGTG
AAGGATGAGAGGATCAGTCGGTTGGTGTGGATGAATTATTTGGCGGGGAA
GAATGTCTCCAGTGAGGGGGCCAGACAGAGTGTCGTGGATGGGATTATGG
GGGTGGTGGAGAGGCCAGTTGGGACTGTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016872intramolecular lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_107940ATCC64974_107940Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107940-T1.exon1ATCC64974_107940-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107940-T1.cdsATCC64974_107940-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_107940-T1ATCC64974_107940-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09264B74
DBxrefInterPro:IPR036298
DBxrefInterPro:IPR016087
DBxrefPFAM:PF16035
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:3853303..3854634 +
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