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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:4581836..4583653+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_110210-T1 ID=ATCC64974_110210-T1|Name=ATCC64974_110210-T1|organism=Aspergillus niger N402|type=mRNA|length=1818bp|location=Sequence derived from alignment at OGUI01000017.1:4581836..4583653+ (Aspergillus niger N402)
ATGCGGGAGGTCAACTTCAGCATCCCAAATGTCAACAAGGCCTCTGTAAA
TATCACAACCACCCTCTACGACCGGCGTGCCTTGGATTGCACATCAACGC
TACCACTCATTAACTCACTCAATCATTTGGCCTACCTCACCACATCATCA
GCCCGAATCCGCGATATTCTGACCGTCGATGGCGGCATCGAACGGCTGGT
ATGTATCCTTAAGGAGGGCCGGAGTCGGGATTTGATGGAGATGTGGAAGT
GGAGCCTCGCCTTCCAATGTGTTGTCAATATTGGTGTGCGGGGCTCGGAG
AGTGTGAGGACTCGAGTAGTCGAAGCCGATATGGTGCCAGTGATTGCCAC
CATACTTGATAACTATATTAAAGTGGTCGAGAAAGCCCGCGCACGGGCGG
ATTCAGAAAGTCAGAGACATTCGTCACGACACCACTCCAAGGCTGCACCC
ATCAGCAGCGACGCCCCTTCGCGTCCAGTGTATGTGGACCAATCGACAAA
CACCGAGCAACGTCCTTCTCGCCGCCAGGCGCCACCGCCTCACATTGAAA
TTCCCCCTTTCTACCAAGACAGCCATGCCTCGGACTCGAACGCCATGGAC
ATCACCTCGTCCCCCCGGGTGCCTGTGACCTCCCCACCGGAACGGAGCAC
CTTTGGGCAGGATGCCCATAACCTTAGATCCAATGATACCCGCTATGCCC
ATGCTGCTCACCGCTACCGGGTGATGCAGCCCCTTGCCACTGCCCTTCCT
CCCATGGATGCAGCCGATGGCTTTGGCTTGCGCCCCGTGCGCGACACAGA
GAGGCTGCCCAGCATGCTTCCTGGCTTCCAGAATGGCCTTGCGTCTCAGC
CCGACTCCCCAACCACTCCCAGCGGTCCTGCGCAGCTGCGCAGCAACACA
CAAGTCGCTCCCGCCCGACCACGGCCTACCCTGAGGCAACAGCAATCAGC
CTCTGGTGAGTCGGATGATGGAAACGGCGAGGGCTCGACTCTGGGTGACG
ACCCGGGTTCTGGAGAGACAGCTGAGCCAATCGTTGGCATCCAAAATCGT
ATGGAGATCGACGATGACGGCGACAGGCAAACTGTGCTGGAAGGTGTTTC
CAACACGCACGACTTGACTGTTAATGATACTTCCGAAAGCCAGGAAGCCG
AGACATTCAACATCACCCACCGTTCTACTGTGGATGGCAGCATGATTAAC
AACGACGCAACGCGCACGAATGGGGCTTTGGGCCTTTCACCCACGCAAGC
CCCTAATACTGCCAACTCGCCTGCTGTTGTTCCCAGCCCATACTCACTGT
ACGTGCGTGACCGATCAACCACAGCCGTCCAAGGCGTCTTGACGACGATG
CCTAAGGATGAAGATGTCCTCATGTCGCTTCAGCTCCTTGCCTATGTGTC
CAAGTACTGCAACCTGCGGTCTTACTTCCAGCACTCCCACCTCGTCCCTA
AGCTCAAGGTTGACCGTGAGCTCCAAATGTTGGAGGATGGCGTATCACCC
ATCGAACCTGCAGAGGAGGAAGATGAATACCTGCTTCCGGACGATGTCAA
CATCTTCCCCTTGGTGGAGAAATTCACGGTTCGCCACCACTCCAAGGACA
TGCAATACTGGGCATGTGTGGTGATGCGGAATCTCTGCCGCAAGGACGAG
TCGAGAGGCGGCATCCGGCAGTGCGCATACTATAAGTGTGGAAAGTGGGA
GGAATTCCAGCGACAGTTTGCAAAGTGCCGGCGCTGCCGCCGCACCAAGT
ACTGCAGCAAAGACTGCCAGAAGGCAGCGTGGGTGTATCACCGTCACTGG
TGCCACACCACGCCATGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:4581836..4583653+ >ATCC64974_110210-T1 ID=ATCC64974_110210-T1|Name=ATCC64974_110210-T1|organism=Aspergillus niger N402|type=CDS|length=1818bp|location=Sequence derived from alignment at OGUI01000017.1:4581836..4583653+ (Aspergillus niger N402)
ATGCGGGAGGTCAACTTCAGCATCCCAAATGTCAACAAGGCCTCTGTAAA
TATCACAACCACCCTCTACGACCGGCGTGCCTTGGATTGCACATCAACGC
TACCACTCATTAACTCACTCAATCATTTGGCCTACCTCACCACATCATCA
GCCCGAATCCGCGATATTCTGACCGTCGATGGCGGCATCGAACGGCTGGT
ATGTATCCTTAAGGAGGGCCGGAGTCGGGATTTGATGGAGATGTGGAAGT
GGAGCCTCGCCTTCCAATGTGTTGTCAATATTGGTGTGCGGGGCTCGGAG
AGTGTGAGGACTCGAGTAGTCGAAGCCGATATGGTGCCAGTGATTGCCAC
CATACTTGATAACTATATTAAAGTGGTCGAGAAAGCCCGCGCACGGGCGG
ATTCAGAAAGTCAGAGACATTCGTCACGACACCACTCCAAGGCTGCACCC
ATCAGCAGCGACGCCCCTTCGCGTCCAGTGTATGTGGACCAATCGACAAA
CACCGAGCAACGTCCTTCTCGCCGCCAGGCGCCACCGCCTCACATTGAAA
TTCCCCCTTTCTACCAAGACAGCCATGCCTCGGACTCGAACGCCATGGAC
ATCACCTCGTCCCCCCGGGTGCCTGTGACCTCCCCACCGGAACGGAGCAC
CTTTGGGCAGGATGCCCATAACCTTAGATCCAATGATACCCGCTATGCCC
ATGCTGCTCACCGCTACCGGGTGATGCAGCCCCTTGCCACTGCCCTTCCT
CCCATGGATGCAGCCGATGGCTTTGGCTTGCGCCCCGTGCGCGACACAGA
GAGGCTGCCCAGCATGCTTCCTGGCTTCCAGAATGGCCTTGCGTCTCAGC
CCGACTCCCCAACCACTCCCAGCGGTCCTGCGCAGCTGCGCAGCAACACA
CAAGTCGCTCCCGCCCGACCACGGCCTACCCTGAGGCAACAGCAATCAGC
CTCTGGTGAGTCGGATGATGGAAACGGCGAGGGCTCGACTCTGGGTGACG
ACCCGGGTTCTGGAGAGACAGCTGAGCCAATCGTTGGCATCCAAAATCGT
ATGGAGATCGACGATGACGGCGACAGGCAAACTGTGCTGGAAGGTGTTTC
CAACACGCACGACTTGACTGTTAATGATACTTCCGAAAGCCAGGAAGCCG
AGACATTCAACATCACCCACCGTTCTACTGTGGATGGCAGCATGATTAAC
AACGACGCAACGCGCACGAATGGGGCTTTGGGCCTTTCACCCACGCAAGC
CCCTAATACTGCCAACTCGCCTGCTGTTGTTCCCAGCCCATACTCACTGT
ACGTGCGTGACCGATCAACCACAGCCGTCCAAGGCGTCTTGACGACGATG
CCTAAGGATGAAGATGTCCTCATGTCGCTTCAGCTCCTTGCCTATGTGTC
CAAGTACTGCAACCTGCGGTCTTACTTCCAGCACTCCCACCTCGTCCCTA
AGCTCAAGGTTGACCGTGAGCTCCAAATGTTGGAGGATGGCGTATCACCC
ATCGAACCTGCAGAGGAGGAAGATGAATACCTGCTTCCGGACGATGTCAA
CATCTTCCCCTTGGTGGAGAAATTCACGGTTCGCCACCACTCCAAGGACA
TGCAATACTGGGCATGTGTGGTGATGCGGAATCTCTGCCGCAAGGACGAG
TCGAGAGGCGGCATCCGGCAGTGCGCATACTATAAGTGTGGAAAGTGGGA
GGAATTCCAGCGACAGTTTGCAAAGTGCCGGCGCTGCCGCCGCACCAAGT
ACTGCAGCAAAGACTGCCAGAAGGCAGCGTGGGTGTATCACCGTCACTGG
TGCCACACCACGCCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_110210-T1.exon1 | ATCC64974_110210-T1.exon1 | Aspergillus niger N402 | exon |
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_110210-T1 | ATCC64974_110210-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG09260H6E |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR002893 |
| DBxref | PFAM:PF01753 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:4581836..4583653 + |
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