You are here

Home

ATCC64974_111200-T1, ATCC64974_111200-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_111200-T1
Unique NameATCC64974_111200-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:4830007..4831241-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_111200-T1 ID=ATCC64974_111200-T1|Name=ATCC64974_111200-T1|organism=Aspergillus niger N402|type=mRNA|length=1235bp|location=Sequence derived from alignment at OGUI01000017.1:4830007..4831241- (Aspergillus niger N402)
ATGACCATTTTTCGGAGTTCAGCAAAGGCCAGTGAGAGCGAACCTCAGTA
TGGCATCAAAGTGCTGTACGACTCCAACGAAGCGGAGGTTGAGTGAGTTT
CCACAGACCTGATAAAGAATATCTTTCCCGAAGTTGACTTTCTTAGCATT
GTCTTTGTCCATGGCCTCGGCGGAAGTCGCGACGCAACCTGGACGATCGA
CGATGTGTGCTGGCCCCAAGCCCTTCTTCCGCACGACTTGCCAAAAACCC
GTATCATGACTTTTGGGTATGATTCACGGGTGGTCAGCTTCACGACAGCT
CTGTCCCAGAACGGAATCGTGGGCAATGCCGAGGACCTTTGTGCTCAGTT
GGCACGGTTCAGAGCCTCTTCGGTAAGAAGCTTTACGATTTAACCAGGAT
CTCGAGAAAGCTAAGGATGAAATATAGCCAGAGCGCCCGATCATCTTTGT
AGCCCATAGCTTGGGCGGCTTGGTCTGCGCGCAGGTAAGTTAACAACCCT
TCTTTTCTCCTCAAGGTCGAAGACTTAACGGAACATCGCAGGCTGTCGTG
GCAGGCAATCGCAGTTCCCCGTCCGACAACACGCAGATAATCAGCCAACA
CGTCCGCGGCATCGCCTTTCTGGGAACTCCATTCTGCGGTTCCGAAATCG
CGAACTGGGTGTCACGCTTAAACAAAGTGGCGGATTACATCTTTGAAAGC
AACAAGGCCAATATCTCGGACCTGAAAAGCAAATCGGGCACATTGCAGCT
CCTGATCGAAGAGTTTGCGAACGTATTGCGAAAGCGCGATAACTCTGATG
ACAGTATCCTAACCACTTTCTTCTACGAGCAGTTGAAAACACAGGGCGTT
ATGGTAACTGGACTGCAGATCCCTGAAATCTCTACTAGTTAAGCTAACAT
GAACAAAGGTGGTTGACCGCAATTCTGCCACTATCCCCGGTCGCGGAGAC
ATGATATCCATCCAAGCCGATCACAAAAACATCTGCAAGTTCCGATCGAG
GGAAGATGATGAAGGATATGGGTTGGTGCTTGGTGCACTGAGGAAAATGA
TGGTTGAGGTACCGGCGAAGCAGAAGTCGAGTGTAAGGATCTATTGCTTG
AGACGCTACTACAATTGCTAACTTTCATCCCAGAGCCCTGTCTTCAACTT
CAACAATGCTGGGGCTTCCATCAACAACCAGGCAGGCCAGCAAACTATCA
ATGGGGGGATGAACTTTGGGACATTTGCGCGATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:4830007..4831241-

>ATCC64974_111200-T1 ID=ATCC64974_111200-T1|Name=ATCC64974_111200-T1|organism=Aspergillus niger N402|type=CDS|length=5778bp|location=Sequence derived from alignment at OGUI01000017.1:4830007..4831241- (Aspergillus niger N402)
AGCCCTGTCTTCAACTTCAACAATGCTGGGGCTTCCATCAACAACCAGGC
AGGCCAGCAAACTATCAATGGGGGGATGAACTTTGGGACATTTGCGCGAT
AGGTGGTTGACCGCAATTCTGCCACTATCCCCGGTCGCGGAGACATGATA
TCCATCCAAGCCGATCACAAAAACATCTGCAAGTTCCGATCGAGGGAAGA
TGATGAAGGATATGGGTTGGTGCTTGGTGCACTGAGGAAAATGATGGTTG
AGGTACCGGCGAAGCAGAAGTCGAGTGCTGTCGTGGCAGGCAATCGCAGT
TCCCCGTCCGACAACACGCAGATAATCAGCCAACACGTCCGCGGCATCGC
CTTTCTGGGAACTCCATTCTGCGGTTCCGAAATCGCGAACTGGGTGTCAC
GCTTAAACAAAGTGGCGGATTACATCTTTGAAAGCAACAAGGCCAATATC
TCGGACCTGAAAAGCAAATCGGGCACATTGCAGCTCCTGATCGAAGAGTT
TGCGAACGTATTGCGAAAGCGCGATAACTCTGATGACAGTATCCTAACCA
CTTTCTTCTACGAGCAGTTGAAAACACAGGGCGTTATGCCAGAGCGCCCG
ATCATCTTTGTAGCCCATAGCTTGGGCGGCTTGGTCTGCGCGCAGCATTG
TCTTTGTCCATGGCCTCGGCGGAAGTCGCGACGCAACCTGGACGATCGAC
GATGTGTGCTGGCCCCAAGCCCTTCTTCCGCACGACTTGCCAAAAACCCG
TATCATGACTTTTGGGTATGATTCACGGGTGGTCAGCTTCACGACAGCTC
TGTCCCAGAACGGAATCGTGGGCAATGCCGAGGACCTTTGTGCTCAGTTG
GCACGGTTCAGAGCCTCTTCGATGACCATTTTTCGGAGTTCAGCAAAGGC
CAGTGAGAGCGAACCTCAGTATGGCATCAAAGTGCTGTACGACTCCAACG
AAGCGGAGGTTGAAGCCCTGTCTTCAACTTCAACAATGCTGGGGCTTCCA
TCAACAACCAGGCAGGCCAGCAAACTATCAATGGGGGGATGAACTTTGGG
ACATTTGCGCGATAGGTGGTTGACCGCAATTCTGCCACTATCCCCGGTCG
CGGAGACATGATATCCATCCAAGCCGATCACAAAAACATCTGCAAGTTCC
GATCGAGGGAAGATGATGAAGGATATGGGTTGGTGCTTGGTGCACTGAGG
AAAATGATGGTTGAGGTACCGGCGAAGCAGAAGTCGAGTGCTGTCGTGGC
AGGCAATCGCAGTTCCCCGTCCGACAACACGCAGATAATCAGCCAACACG
TCCGCGGCATCGCCTTTCTGGGAACTCCATTCTGCGGTTCCGAAATCGCG
AACTGGGTGTCACGCTTAAACAAAGTGGCGGATTACATCTTTGAAAGCAA
CAAGGCCAATATCTCGGACCTGAAAAGCAAATCGGGCACATTGCAGCTCC
TGATCGAAGAGTTTGCGAACGTATTGCGAAAGCGCGATAACTCTGATGAC
AGTATCCTAACCACTTTCTTCTACGAGCAGTTGAAAACACAGGGCGTTAT
GCCAGAGCGCCCGATCATCTTTGTAGCCCATAGCTTGGGCGGCTTGGTCT
GCGCGCAGCATTGTCTTTGTCCATGGCCTCGGCGGAAGTCGCGACGCAAC
CTGGACGATCGACGATGTGTGCTGGCCCCAAGCCCTTCTTCCGCACGACT
TGCCAAAAACCCGTATCATGACTTTTGGGTATGATTCACGGGTGGTCAGC
TTCACGACAGCTCTGTCCCAGAACGGAATCGTGGGCAATGCCGAGGACCT
TTGTGCTCAGTTGGCACGGTTCAGAGCCTCTTCGATGACCATTTTTCGGA
GTTCAGCAAAGGCCAGTGAGAGCGAACCTCAGTATGGCATCAAAGTGCTG
TACGACTCCAACGAAGCGGAGGTTGAAGCCCTGTCTTCAACTTCAACAAT
GCTGGGGCTTCCATCAACAACCAGGCAGGCCAGCAAACTATCAATGGGGG
GATGAACTTTGGGACATTTGCGCGATAGGTGGTTGACCGCAATTCTGCCA
CTATCCCCGGTCGCGGAGACATGATATCCATCCAAGCCGATCACAAAAAC
ATCTGCAAGTTCCGATCGAGGGAAGATGATGAAGGATATGGGTTGGTGCT
TGGTGCACTGAGGAAAATGATGGTTGAGGTACCGGCGAAGCAGAAGTCGA
GTGCTGTCGTGGCAGGCAATCGCAGTTCCCCGTCCGACAACACGCAGATA
ATCAGCCAACACGTCCGCGGCATCGCCTTTCTGGGAACTCCATTCTGCGG
TTCCGAAATCGCGAACTGGGTGTCACGCTTAAACAAAGTGGCGGATTACA
TCTTTGAAAGCAACAAGGCCAATATCTCGGACCTGAAAAGCAAATCGGGC
ACATTGCAGCTCCTGATCGAAGAGTTTGCGAACGTATTGCGAAAGCGCGA
TAACTCTGATGACAGTATCCTAACCACTTTCTTCTACGAGCAGTTGAAAA
CACAGGGCGTTATGCCAGAGCGCCCGATCATCTTTGTAGCCCATAGCTTG
GGCGGCTTGGTCTGCGCGCAGCATTGTCTTTGTCCATGGCCTCGGCGGAA
GTCGCGACGCAACCTGGACGATCGACGATGTGTGCTGGCCCCAAGCCCTT
CTTCCGCACGACTTGCCAAAAACCCGTATCATGACTTTTGGGTATGATTC
ACGGGTGGTCAGCTTCACGACAGCTCTGTCCCAGAACGGAATCGTGGGCA
ATGCCGAGGACCTTTGTGCTCAGTTGGCACGGTTCAGAGCCTCTTCGATG
ACCATTTTTCGGAGTTCAGCAAAGGCCAGTGAGAGCGAACCTCAGTATGG
CATCAAAGTGCTGTACGACTCCAACGAAGCGGAGGTTGAAGCCCTGTCTT
CAACTTCAACAATGCTGGGGCTTCCATCAACAACCAGGCAGGCCAGCAAA
CTATCAATGGGGGGATGAACTTTGGGACATTTGCGCGATAGGTGGTTGAC
CGCAATTCTGCCACTATCCCCGGTCGCGGAGACATGATATCCATCCAAGC
CGATCACAAAAACATCTGCAAGTTCCGATCGAGGGAAGATGATGAAGGAT
ATGGGTTGGTGCTTGGTGCACTGAGGAAAATGATGGTTGAGGTACCGGCG
AAGCAGAAGTCGAGTGCTGTCGTGGCAGGCAATCGCAGTTCCCCGTCCGA
CAACACGCAGATAATCAGCCAACACGTCCGCGGCATCGCCTTTCTGGGAA
CTCCATTCTGCGGTTCCGAAATCGCGAACTGGGTGTCACGCTTAAACAAA
GTGGCGGATTACATCTTTGAAAGCAACAAGGCCAATATCTCGGACCTGAA
AAGCAAATCGGGCACATTGCAGCTCCTGATCGAAGAGTTTGCGAACGTAT
TGCGAAAGCGCGATAACTCTGATGACAGTATCCTAACCACTTTCTTCTAC
GAGCAGTTGAAAACACAGGGCGTTATGCCAGAGCGCCCGATCATCTTTGT
AGCCCATAGCTTGGGCGGCTTGGTCTGCGCGCAGCATTGTCTTTGTCCAT
GGCCTCGGCGGAAGTCGCGACGCAACCTGGACGATCGACGATGTGTGCTG
GCCCCAAGCCCTTCTTCCGCACGACTTGCCAAAAACCCGTATCATGACTT
TTGGGTATGATTCACGGGTGGTCAGCTTCACGACAGCTCTGTCCCAGAAC
GGAATCGTGGGCAATGCCGAGGACCTTTGTGCTCAGTTGGCACGGTTCAG
AGCCTCTTCGATGACCATTTTTCGGAGTTCAGCAAAGGCCAGTGAGAGCG
AACCTCAGTATGGCATCAAAGTGCTGTACGACTCCAACGAAGCGGAGGTT
GAAGCCCTGTCTTCAACTTCAACAATGCTGGGGCTTCCATCAACAACCAG
GCAGGCCAGCAAACTATCAATGGGGGGATGAACTTTGGGACATTTGCGCG
ATAGGTGGTTGACCGCAATTCTGCCACTATCCCCGGTCGCGGAGACATGA
TATCCATCCAAGCCGATCACAAAAACATCTGCAAGTTCCGATCGAGGGAA
GATGATGAAGGATATGGGTTGGTGCTTGGTGCACTGAGGAAAATGATGGT
TGAGGTACCGGCGAAGCAGAAGTCGAGTGCTGTCGTGGCAGGCAATCGCA
GTTCCCCGTCCGACAACACGCAGATAATCAGCCAACACGTCCGCGGCATC
GCCTTTCTGGGAACTCCATTCTGCGGTTCCGAAATCGCGAACTGGGTGTC
ACGCTTAAACAAAGTGGCGGATTACATCTTTGAAAGCAACAAGGCCAATA
TCTCGGACCTGAAAAGCAAATCGGGCACATTGCAGCTCCTGATCGAAGAG
TTTGCGAACGTATTGCGAAAGCGCGATAACTCTGATGACAGTATCCTAAC
CACTTTCTTCTACGAGCAGTTGAAAACACAGGGCGTTATGCCAGAGCGCC
CGATCATCTTTGTAGCCCATAGCTTGGGCGGCTTGGTCTGCGCGCAGCAT
TGTCTTTGTCCATGGCCTCGGCGGAAGTCGCGACGCAACCTGGACGATCG
ACGATGTGTGCTGGCCCCAAGCCCTTCTTCCGCACGACTTGCCAAAAACC
CGTATCATGACTTTTGGGTATGATTCACGGGTGGTCAGCTTCACGACAGC
TCTGTCCCAGAACGGAATCGTGGGCAATGCCGAGGACCTTTGTGCTCAGT
TGGCACGGTTCAGAGCCTCTTCGATGACCATTTTTCGGAGTTCAGCAAAG
GCCAGTGAGAGCGAACCTCAGTATGGCATCAAAGTGCTGTACGACTCCAA
CGAAGCGGAGGTTGAAGCCCTGTCTTCAACTTCAACAATGCTGGGGCTTC
CATCAACAACCAGGCAGGCCAGCAAACTATCAATGGGGGGATGAACTTTG
GGACATTTGCGCGATAGGTGGTTGACCGCAATTCTGCCACTATCCCCGGT
CGCGGAGACATGATATCCATCCAAGCCGATCACAAAAACATCTGCAAGTT
CCGATCGAGGGAAGATGATGAAGGATATGGGTTGGTGCTTGGTGCACTGA
GGAAAATGATGGTTGAGGTACCGGCGAAGCAGAAGTCGAGTGCTGTCGTG
GCAGGCAATCGCAGTTCCCCGTCCGACAACACGCAGATAATCAGCCAACA
CGTCCGCGGCATCGCCTTTCTGGGAACTCCATTCTGCGGTTCCGAAATCG
CGAACTGGGTGTCACGCTTAAACAAAGTGGCGGATTACATCTTTGAAAGC
AACAAGGCCAATATCTCGGACCTGAAAAGCAAATCGGGCACATTGCAGCT
CCTGATCGAAGAGTTTGCGAACGTATTGCGAAAGCGCGATAACTCTGATG
ACAGTATCCTAACCACTTTCTTCTACGAGCAGTTGAAAACACAGGGCGTT
ATGCCAGAGCGCCCGATCATCTTTGTAGCCCATAGCTTGGGCGGCTTGGT
CTGCGCGCAGCATTGTCTTTGTCCATGGCCTCGGCGGAAGTCGCGACGCA
ACCTGGACGATCGACGATGTGTGCTGGCCCCAAGCCCTTCTTCCGCACGA
CTTGCCAAAAACCCGTATCATGACTTTTGGGTATGATTCACGGGTGGTCA
GCTTCACGACAGCTCTGTCCCAGAACGGAATCGTGGGCAATGCCGAGGAC
CTTTGTGCTCAGTTGGCACGGTTCAGAGCCTCTTCGATGACCATTTTTCG
GAGTTCAGCAAAGGCCAGTGAGAGCGAACCTCAGTATGGCATCAAAGTGC
TGTACGACTCCAACGAAGCGGAGGTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_111200ATCC64974_111200Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_111200-T1ATCC64974_111200-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_111200-T1.cdsATCC64974_111200-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_111200-T1.exon6ATCC64974_111200-T1.exon6Aspergillus niger N402exon
ATCC64974_111200-T1.exon5ATCC64974_111200-T1.exon5Aspergillus niger N402exon
ATCC64974_111200-T1.exon4ATCC64974_111200-T1.exon4Aspergillus niger N402exon
ATCC64974_111200-T1.exon3ATCC64974_111200-T1.exon3Aspergillus niger N402exon
ATCC64974_111200-T1.exon2ATCC64974_111200-T1.exon2Aspergillus niger N402exon
ATCC64974_111200-T1.exon1ATCC64974_111200-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000073
DBxrefPFAM:PF05057
DBxrefPFAM:PF12697
DBxrefPFAM:PF00561
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:4830007..4831241 -
Powered by Drupal