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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:1543115..1543941- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_24200-T1 ID=CAN33_24200-T1|Name=CAN33_24200-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=827bp|location=Sequence derived from alignment at NKJJ01000002.1:1543115..1543941- (Aspergillus niger FDAARGOS_311)
ATGTCCTTGACGCTGGGAAGCCAGATCCAACAGAGTCTCGAGGCCGACAT
CGCCAATGGCAGACTCTCGACCGTCAGGGAACTTTACGAGTCAACAGACC
CAGATGGGCAGTCCAGTCTACTAGCACAGATCGCTGCACTCGCTGCAAAG
CACATTCAGCTTGACATCATAGACTGGGTCTTCAATGAGGGTTTCCAGCT
CCCTCTTGAAACACTAAATGACGAGTTCTACTTCCAAGTCTGCGCCGCTG
GATCACTTGAGTTGTGGAAAAGAGTTGTCAAGAATGGCTTTAATCTAAAT
GGCCATCGCAGTGAGTACAGAGGGGATGCTCTCAGCCTGGCAGCATACGA
GGGTAAAATTGACATTGTACGCTTCCTTTTGGAGAATGGACAGAATCCAA
ATGATTCCTGGGCAGGGTATATGATATGGAACCGAGTGTGGCTGCATTAG
CGGGTGAGAGGCCATCACTGATGATTCTCCATCTATTACTACAACATGGA
TGGAACTAGAAGGGTAGTGTCGCGCATATTGCGGCAGTTGAGATCGGCAA
TATGGAAGCACTGAAGTTACTGGCGGAGCATGGCGCAGATTTGGAGGAGG
CCCGCGGGTGGTGGTTCAATTGTGGTGTGGAAGGGGATGTATGGGGGACT
GCACTGTATCGAGCAGCCTTTAAGGGCCAGAGAGATTCTGTGGCGTATCT
GCTAGACAAGGGAGCCAGCACCAGGTTCAAGGATGAAAAGGGGCGGCCTA
TCATGTGGGCGGCGAGACAAGGGGATAATAAAGAGGTGATCAGCCTGCTG
CTGGATGTTGGGCTGGAGGGAGAATGA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:1543115..1543941- >CAN33_24200-T1 ID=CAN33_24200-T1|Name=CAN33_24200-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1368bp|location=Sequence derived from alignment at NKJJ01000002.1:1543115..1543941- (Aspergillus niger FDAARGOS_311)
AAGGGTAGTGTCGCGCATATTGCGGCAGTTGAGATCGGCAATATGGAAGC
ACTGAAGTTACTGGCGGAGCATGGCGCAGATTTGGAGGAGGCCCGCGGGT
GGTGGTTCAATTGTGGTGTGGAAGGGGATGTATGGGGGACTGCACTGTAT
CGAGCAGCCTTTAAGGGCCAGAGAGATTCTGTGGCGTATCTGCTAGACAA
GGGAGCCAGCACCAGGTTCAAGGATGAAAAGGGGCGGCCTATCATGTGGG
CGGCGAGACAAGGGGATAATAAAGAGGTGATCAGCCTGCTGCTGGATGTT
GGGCTGGAGGGAGAATGAATGTCCTTGACGCTGGGAAGCCAGATCCAACA
GAGTCTCGAGGCCGACATCGCCAATGGCAGACTCTCGACCGTCAGGGAAC
TTTACGAGTCAACAGACCCAGATGGGCAGTCCAGTCTACTAGCACAGATC
GCTGCACTCGCTGCAAAGCACATTCAGCTTGACATCATAGACTGGGTCTT
CAATGAGGGTTTCCAGCTCCCTCTTGAAACACTAAATGACGAGTTCTACT
TCCAAGTCTGCGCCGCTGGATCACTTGAGTTGTGGAAAAGAGTTGTCAAG
AATGGCTTTAATCTAAATGGCCATCGCAGTGAGTACAGAGGGGATGCTCT
CAGCCTGGCAGCATACGAGGGTAAAATTGACATTAAGGGTAGTGTCGCGC
ATATTGCGGCAGTTGAGATCGGCAATATGGAAGCACTGAAGTTACTGGCG
GAGCATGGCGCAGATTTGGAGGAGGCCCGCGGGTGGTGGTTCAATTGTGG
TGTGGAAGGGGATGTATGGGGGACTGCACTGTATCGAGCAGCCTTTAAGG
GCCAGAGAGATTCTGTGGCGTATCTGCTAGACAAGGGAGCCAGCACCAGG
TTCAAGGATGAAAAGGGGCGGCCTATCATGTGGGCGGCGAGACAAGGGGA
TAATAAAGAGGTGATCAGCCTGCTGCTGGATGTTGGGCTGGAGGGAGAAT
GAATGTCCTTGACGCTGGGAAGCCAGATCCAACAGAGTCTCGAGGCCGAC
ATCGCCAATGGCAGACTCTCGACCGTCAGGGAACTTTACGAGTCAACAGA
CCCAGATGGGCAGTCCAGTCTACTAGCACAGATCGCTGCACTCGCTGCAA
AGCACATTCAGCTTGACATCATAGACTGGGTCTTCAATGAGGGTTTCCAG
CTCCCTCTTGAAACACTAAATGACGAGTTCTACTTCCAAGTCTGCGCCGC
TGGATCACTTGAGTTGTGGAAAAGAGTTGTCAAGAATGGCTTTAATCTAA
ATGGCCATCGCAGTGAGTACAGAGGGGATGCTCTCAGCCTGGCAGCATAC
GAGGGTAAAATTGACATT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR002110 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | PFAM:PF12796 |
| Product | Ankyrin repeats (3 copies) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:1543115..1543941 - |
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