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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:1736366..1737473- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_24535-T1 ID=CAN33_24535-T1|Name=CAN33_24535-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1108bp|location=Sequence derived from alignment at NKJJ01000002.1:1736366..1737473- (Aspergillus niger FDAARGOS_311)
ATGGCTTCAAGATTCTCGGCGCAATTGCTAGTGCCTTTGGCGCGGTCGTC
CGTTCGTTGTCGGGCTGCATCCACTCCCGTCTTCTCGGTTCTCGCCGGCC
GACATGCCATCGCCACTCCTTCACCAACAGAGCTTCAGAAGCGGTATAGC
TCTCATTCTCCGCTGGGGGCCGCCTCGGCCAATCCCCGAAAGAAGGTGAC
CATGCAGACGTTACGGAATCTTTACAAGAAAGGGGAGCCAATTACGATGC
TTACGGCGCATGACTTCCCCAGTGGCCATGTCGCGGAAATGGCGGGGATG
GACGTGGTCCTGGTCGGTGACAGCTTGGCCATGGTTGCCCTCGGCATGGA
GGATACAAGTGAGATCCTTATGGATGAGATGTTGTTGCATTGTCGGAGTG
TCGCGCGTGCTGTCAAGAGTGCATTCACGGTTCGTATTCTTACCGTCCTT
CTTGAGTTTGTCGAGATTAACGTGTGATTTCGGCGCAGGTCGCAGATCTC
CCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGTTCAGTCTGCCAT
CCGCATCGTGAAGGAGGGTCGCGTTCAGGCTATCAAGCTCGAGGGTGGTG
CTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCCGGTATCCCTGTT
TGTGGTCACATCGGGCTTACGCCTCAACGTCAACACGCTCTTGGAGGGTT
CAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGCTGTTGAAAGATG
CCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTTCTGGAAGCCGTG
CCTGCTGAGATTGCCGCCCTCATTACGAAGAAGTTGCGTATCCCCACGAT
TGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCCTGGTTCAAATTG
ATATGATCGGGAACTACCCCCGGGCCGGTTCCTTCCCAAATTCGTCAAGA
AGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAATTCAACAATACCGT
GAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAATACACCTACCCTAT
TGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATTGAGCACTTCGGCA
AGGACTAA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:1736366..1737473- >CAN33_24535-T1 ID=CAN33_24535-T1|Name=CAN33_24535-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2970bp|location=Sequence derived from alignment at NKJJ01000002.1:1736366..1737473- (Aspergillus niger FDAARGOS_311)
AAGTATGGCGACGTCTGGGGAGAGGCTATCAAAGGAATTCAACAATACCG
TGAAGAGGTTAAGAGCCGGGCGTATCCTTCCGAAGAATACACCTACCCTA
TTGCGAAGGAAGAATTGGCCGAGTTTGAAAAGGCCATTGAGCACTTCGGC
AAGGACTAAGTCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCCCGA
GCAGGCTGTTCAGTCTGCCATCCGCATCGTGAAGGAGGGTCGCGTTCAGG
CTATCAAGCTCGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGTATC
ACGCAGGCCGGTATCCCTGTTTGTGGTCACATCGGGCTTACGCCTCAACG
TCAACACGCTCTTGGAGGGTTCAGGGTTCAGGGCAAAACGACCGCCAGCG
CAGTGAGGCTGTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCATTC
ATGATGGTTCTGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTACGAA
GAAGTTGCGTATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCTCCG
GACAAGTCCTGATGGCTTCAAGATTCTCGGCGCAATTGCTAGTGCCTTTG
GCGCGGTCGTCCGTTCGTTGTCGGGCTGCATCCACTCCCGTCTTCTCGGT
TCTCGCCGGCCGACATGCCATCGCCACTCCTTCACCAACAGAGCTTCAGA
AGCGGTATAGCTCTCATTCTCCGCTGGGGGCCGCCTCGGCCAATCCCCGA
AAGAAGGTGACCATGCAGACGTTACGGAATCTTTACAAGAAAGGGGAGCC
AATTACGATGCTTACGGCGCATGACTTCCCCAGTGGCCATGTCGCGGAAA
TGGCGGGGATGGACGTGGTCCTGGTCGGTGACAGCTTGGCCATGGTTGCC
CTCGGCATGGAGGATACAAGTGAGATCCTTATGGATGAGATGTTGTTGCA
TTGTCGGAGTGTCGCGCGTGCTGTCAAGAGTGCATTCACGAAGTATGGCG
ACGTCTGGGGAGAGGCTATCAAAGGAATTCAACAATACCGTGAAGAGGTT
AAGAGCCGGGCGTATCCTTCCGAAGAATACACCTACCCTATTGCGAAGGA
AGAATTGGCCGAGTTTGAAAAGGCCATTGAGCACTTCGGCAAGGACTAAG
TCGCAGATCTCCCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGTT
CAGTCTGCCATCCGCATCGTGAAGGAGGGTCGCGTTCAGGCTATCAAGCT
CGAGGGTGGTGCTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCCG
GTATCCCTGTTTGTGGTCACATCGGGCTTACGCCTCAACGTCAACACGCT
CTTGGAGGGTTCAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGCT
GTTGAAAGATGCCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTTC
TGGAAGCCGTGCCTGCTGAGATTGCCGCCCTCATTACGAAGAAGTTGCGT
ATCCCCACGATTGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCCT
GATGGCTTCAAGATTCTCGGCGCAATTGCTAGTGCCTTTGGCGCGGTCGT
CCGTTCGTTGTCGGGCTGCATCCACTCCCGTCTTCTCGGTTCTCGCCGGC
CGACATGCCATCGCCACTCCTTCACCAACAGAGCTTCAGAAGCGGTATAG
CTCTCATTCTCCGCTGGGGGCCGCCTCGGCCAATCCCCGAAAGAAGGTGA
CCATGCAGACGTTACGGAATCTTTACAAGAAAGGGGAGCCAATTACGATG
CTTACGGCGCATGACTTCCCCAGTGGCCATGTCGCGGAAATGGCGGGGAT
GGACGTGGTCCTGGTCGGTGACAGCTTGGCCATGGTTGCCCTCGGCATGG
AGGATACAAGTGAGATCCTTATGGATGAGATGTTGTTGCATTGTCGGAGT
GTCGCGCGTGCTGTCAAGAGTGCATTCACGAAGTATGGCGACGTCTGGGG
AGAGGCTATCAAAGGAATTCAACAATACCGTGAAGAGGTTAAGAGCCGGG
CGTATCCTTCCGAAGAATACACCTACCCTATTGCGAAGGAAGAATTGGCC
GAGTTTGAAAAGGCCATTGAGCACTTCGGCAAGGACTAAGTCGCAGATCT
CCCCATGGGGTCATATGAAGTTTCCCCCGAGCAGGCTGTTCAGTCTGCCA
TCCGCATCGTGAAGGAGGGTCGCGTTCAGGCTATCAAGCTCGAGGGTGGT
GCTGAGATGGCTCCGTCCATCAAACGTATCACGCAGGCCGGTATCCCTGT
TTGTGGTCACATCGGGCTTACGCCTCAACGTCAACACGCTCTTGGAGGGT
TCAGGGTTCAGGGCAAAACGACCGCCAGCGCAGTGAGGCTGTTGAAAGAT
GCCTTGGCCGTCCAGGAAGCTGGCGCATTCATGATGGTTCTGGAAGCCGT
GCCTGCTGAGATTGCCGCCCTCATTACGAAGAAGTTGCGTATCCCCACGA
TTGGCATCGGTGCTGGAAACGGATGCTCCGGACAAGTCCTGATGGCTTCA
AGATTCTCGGCGCAATTGCTAGTGCCTTTGGCGCGGTCGTCCGTTCGTTG
TCGGGCTGCATCCACTCCCGTCTTCTCGGTTCTCGCCGGCCGACATGCCA
TCGCCACTCCTTCACCAACAGAGCTTCAGAAGCGGTATAGCTCTCATTCT
CCGCTGGGGGCCGCCTCGGCCAATCCCCGAAAGAAGGTGACCATGCAGAC
GTTACGGAATCTTTACAAGAAAGGGGAGCCAATTACGATGCTTACGGCGC
ATGACTTCCCCAGTGGCCATGTCGCGGAAATGGCGGGGATGGACGTGGTC
CTGGTCGGTGACAGCTTGGCCATGGTTGCCCTCGGCATGGAGGATACAAG
TGAGATCCTTATGGATGAGATGTTGTTGCATTGTCGGAGTGTCGCGCGTG
CTGTCAAGAGTGCATTCACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015940 | pantothenate biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0003864 | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263FTE |
| DBxref | InterPro:IPR015813 |
| DBxref | InterPro:IPR040442 |
| DBxref | InterPro:IPR003700 |
| DBxref | PFAM:PF02548 |
| Product | Ketopantoate hydroxymethyltransferase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:1736366..1737473 - |
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