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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000002.1:2650921..2652036+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_26055-T1 ID=CAN33_26055-T1|Name=CAN33_26055-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1116bp|location=Sequence derived from alignment at NKJJ01000002.1:2650921..2652036+ (Aspergillus niger FDAARGOS_311)
ATGGCTGGCGTAGGTGAGGAAAACCACAAGAAGCGCAAGCTTCCAGATGT
CCCCGAGATCGAGATTGACGTTTCTGCCCCCGAGCCTCCCTCAAAGAAGG
CGTTGCGAAAGCTCAAGAAGAAGGCTGCAGAAGGCCCCTCGGATACCACT
ACAGAGAAGAAAACAGAGGAGACCCCTGTAGACAATGACAAAGCTGCCAC
TCAGAAGCGCTCCGATTTTGGTATCTGGATCGGAAACCTGCCATTCTTCG
CGACGAAAGATGACGTGCGCAAGTTCTTTACGACCAACTGCTCCTTTACG
GATACGACCATCACGAGAATTCACATGCCCAAGTCTGGTGATAAGCATGG
AAAAGCCCAGAACAAAGGATTCGCTTACGTCGATTTCTCCACGCAGAAGG
CCTGCCAGGAGGCAATGGGCCTCAGTGAACAGCTTCTCACCGGACGTCGT
GTGCTCATCAAAGATGCAAAGAACTTCTCTGGTAGGCCAGAGAAGCCTCA
AGGAGAGGGTCAGAACGCCAATTCGGGGGCAGCATCTGGAAATCCCCCGT
CAAAGCGGATATTTGTCGGCAACCTCGGCTTCGACGCTACGAAGGAGCTC
ATCGAAGAGCACTTCTCCCAATGTGGGACTATCGCAAACGTACATGTGGC
AACATTCCAAGACTCCGGCAAATGCAAGGGTTATGCTTGGGTAGTGTTTG
AGGATCTTGCAGCAGCCGAAGCAGCGGTGAAGGGCTACGTGCTGGTTAAG
GAGGATGATGAAGAGGATGAAGAGTCCGACACCGAAAGCCGCAAAAAGTC
CAAGAAGCCGCGACAGAAGAGAGTGTGGGTGAACAACCTGCTCGGTAGGC
GGATGCGCATGGAATTTGCCGAAGATGCCACGACGCGCTATAAGAAGCGA
TTCGGTAAGGACGGCGAAGGCAAGAAGAACAATACCTCAGACATCAGCGA
GGTTGAGCCTGCAGAGAACAACTCGGCGGGTGAGCAGTCTCGCCAGTCGC
GACCGGGCAAGGCTAGGCAAGGAAAGCCGGATTATACCAGATACGATCAA
GATACTGTTCAGAAGCTCAGTGGAGCCATTGTTGAAGCTCAAGGAAAGAA
GATCACCTTTGATTAA back to topCoding sequence (CDS) from alignment at NKJJ01000002.1:2650921..2652036+ >CAN33_26055-T1 ID=CAN33_26055-T1|Name=CAN33_26055-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1116bp|location=Sequence derived from alignment at NKJJ01000002.1:2650921..2652036+ (Aspergillus niger FDAARGOS_311)
ATGGCTGGCGTAGGTGAGGAAAACCACAAGAAGCGCAAGCTTCCAGATGT
CCCCGAGATCGAGATTGACGTTTCTGCCCCCGAGCCTCCCTCAAAGAAGG
CGTTGCGAAAGCTCAAGAAGAAGGCTGCAGAAGGCCCCTCGGATACCACT
ACAGAGAAGAAAACAGAGGAGACCCCTGTAGACAATGACAAAGCTGCCAC
TCAGAAGCGCTCCGATTTTGGTATCTGGATCGGAAACCTGCCATTCTTCG
CGACGAAAGATGACGTGCGCAAGTTCTTTACGACCAACTGCTCCTTTACG
GATACGACCATCACGAGAATTCACATGCCCAAGTCTGGTGATAAGCATGG
AAAAGCCCAGAACAAAGGATTCGCTTACGTCGATTTCTCCACGCAGAAGG
CCTGCCAGGAGGCAATGGGCCTCAGTGAACAGCTTCTCACCGGACGTCGT
GTGCTCATCAAAGATGCAAAGAACTTCTCTGGTAGGCCAGAGAAGCCTCA
AGGAGAGGGTCAGAACGCCAATTCGGGGGCAGCATCTGGAAATCCCCCGT
CAAAGCGGATATTTGTCGGCAACCTCGGCTTCGACGCTACGAAGGAGCTC
ATCGAAGAGCACTTCTCCCAATGTGGGACTATCGCAAACGTACATGTGGC
AACATTCCAAGACTCCGGCAAATGCAAGGGTTATGCTTGGGTAGTGTTTG
AGGATCTTGCAGCAGCCGAAGCAGCGGTGAAGGGCTACGTGCTGGTTAAG
GAGGATGATGAAGAGGATGAAGAGTCCGACACCGAAAGCCGCAAAAAGTC
CAAGAAGCCGCGACAGAAGAGAGTGTGGGTGAACAACCTGCTCGGTAGGC
GGATGCGCATGGAATTTGCCGAAGATGCCACGACGCGCTATAAGAAGCGA
TTCGGTAAGGACGGCGAAGGCAAGAAGAACAATACCTCAGACATCAGCGA
GGTTGAGCCTGCAGAGAACAACTCGGCGGGTGAGCAGTCTCGCCAGTCGC
GACCGGGCAAGGCTAGGCAAGGAAAGCCGGATTATACCAGATACGATCAA
GATACTGTTCAGAAGCTCAGTGGAGCCATTGTTGAAGCTCAAGGAAAGAA
GATCACCTTTGATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG092645U1 |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | RNA recognition motif (RRM RBD or RNP domain) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000002.1 | supercontig | NKJJ01000002.1:2650921..2652036 + |
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