You are here

Home

CAN33_29880-T1, CAN33_29880-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_29880-T1
Unique NameCAN33_29880-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:111667..114172+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_29880-T1 ID=CAN33_29880-T1|Name=CAN33_29880-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2506bp|location=Sequence derived from alignment at NKJJ01000003.1:111667..114172+ (Aspergillus niger FDAARGOS_311)
ATGGTCTCCATCACGACCGAGTACATCAGCGTCGGGGGCAATAGGCATCC
CGCCGCCGCTGACTGGGACGTCCAGTCAGGCGTGCTTGCCTTTGGCGCAG
ATAACAATGTTGCTCTCTGGGATCCCCGAGTAAGTTACTCCTCAAATATT
TGCTTGGTTACTTTCAAGATGGTGGTGGTTGATGCTGATGGTGGGGCCTT
GGGTGATGATGTAGGAGAGCTCGCAGCGCGGGGTCTATTCGCTTCTTGTC
GGCCACACCGACAAGGTCAGTGTCGTTCGGTTCTACACATGCCCTTCCAC
CGGCACGAAACTTCTCTTGACTGGTTCTGTTGATCATACGGTCCGGTTAT
GGCGCCCCGATCCAGTAAATCCCCGCCAGTTCGTTCACGCGCATACTTTG
GAAGGACATACCGGCTCAGTCAATACTATCGCCGTAGCTGAAGGATTAGA
CATTATCGCATCGGGCGCAGCTGATGCTAGTGTGAAGATATGGAAGATCA
GCGCGCAGGGAGAGCCAAAGGGCGAACTCTTGGAATCCATTCCCATGAAG
CCACGCTTCTTTCCGTTGGCTTTGGCATTGACCCCGCTCCAAACGGAGTC
GAACGATAGACCTGTGGCTTTCGCGGTGGCAGGGACCACCAACATTGTGC
AGATATATGCAGCAGAGAACACTCTTGTCGACCCCGATTTCAAGCTTGCG
GCTGTGCTGTCCGGACACGAGGCGTGGGTGCGCTCCTTGTCTTTCACATC
GGATAAGCAAAGCAAGATGGGCGATTTGCTGTTGGCCTCGGCAAGCCAAG
ACAAGTATGTTCGACTCTGGCGATTCCAACGTGGAGAGGTTACGCAGGCC
ACGCCGGCGTGTGATGATGATCCTATGCTGGGTGGCTTCGAGCCCACGCT
ATCGAATAAGGCGCACCAGTTCACCGCGGCGGGGACCAAATACTCTGTTA
CATTCGAAGCTCTCTTGTTCGGAAATGAGGATTGGATTTACACGACTGCG
TGGAACCCTGACCCGGAGCGCCAGCAACTCCTCACTGCATCGGCAGACAA
CACATTGACCATTTGGGAACAAGATCCGGTTTCGGGAGTGTGGCTTTCTG
CCGAAAGAATGGGAGAGATCAGTGTTCAGAAAGGTTCCACTACAGCTACT
GGTAGTACTGGTGGGTTCTGGATTGGTCTTTGGGCCCCAGACGGCAAGCA
AGTCGTGAGTCTGGGCCGCACTGGAAGCTGGCGCTCGTGGAAGTATGATG
CGGAAACCGATATGTGGGCGCAATCCTTGGGTATCTCAGGGCATGTGCGG
GCATCCAACGGGGTCCAATGGGAGCCTACTGGAGGATATCTCCTGTCGAC
AAGTGCGGATCAAACGACACGTCTGCATGCTCAGTGGCTGCGTGATGGAC
TGAAGTCATGGCATGAATTTTCACGACCTCAGATTCATGGATACGATTTG
AATTGCGTGGATACCCTGGGCCCGGCTCGGTTCGTGTCCGGCGCGGAAGA
AAAGCTACTGCGAGTATTTAACGAGCCTGCGCCTATCGCACAGCTCCTAG
AGAAGCTTTCGGGGTTCAAGCAGACGACCGAAGGGGCATTATCGGACACG
GCACAGATTCCCGTCCTAGGACTGTCTAACCAGGCCCCGGCCGATGATGC
GCCTACAGGTGAAGATGGAGTAGAGGGCGAGGAAGTTGGCAAAGCTCAGG
CCAATCAGGCGCTTTTGGCGGAATCGGAGCAACCGCCATTGGAAGACCAG
CTCGCTCGCTACACATTATGGCCAGAGCATGAGAAGCTGTATGGTCACGG
GTACGAGATCTCAGCCGTGGCTGTCAGCCACGACCGCACACTTATTGCCA
CCGCTTGCAAGGCGAGCTCGATTGATCATGCCGTGGTGCGTCTGTACGAC
ACGTCAGACTGGCACGAGATTCGTCCATCTCTTGCCGCGCACACCTTGAC
CATTACTAGTCTCGCCTTCTCCAGTGACGACCAGTACCTTCTGAGTGTCG
GACGTGACCGGCAATGGGCTGTTTACGAACGCAGCGAACAGGACCCCTCT
ACTTTCTCCCTTCTAATTTCGAACCCGAAGGGTCATTCCCGAATGATCCT
CGATGCCGCATGGGCACCTGCGTCGGGAAAGCCCATCTTCGCAACCGCCG
GCCGGGACAAGTCAGTGAAGCTGTGGCAGAAGACCGAAGGCTCCTTTGAG
TGCAAATCCACCATCCCGCTGACAACGCCTGTCACTGCACTGGCGTTCCT
TCCGCAGATATATAGCAACTCCTTCTTCGTGGCCACGGGCGAGGAAAGCG
GAGCAGTGTCTGTCTACCGAGTCGCAGTCGACAGCCTGGAAGCCAGCCAA
TTGTCAAGCATCGATAAGCTTGCATCTCCTTCGAAGGCGATCACGCAGCT
GTCCTGGCGGCCGGTACCGGATGTAGATACACGGGATTTTGCACTGGCGG
TAGCAAGTGAGGACACTTCAACTCGGATATATAGTTTCTCGGACATGGTC
TCATAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000003.1:111667..114172+

>CAN33_29880-T1 ID=CAN33_29880-T1|Name=CAN33_29880-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4842bp|location=Sequence derived from alignment at NKJJ01000003.1:111667..114172+ (Aspergillus niger FDAARGOS_311)
ATGGTCTCCATCACGACCGAGTACATCAGCGTCGGGGGCAATAGGCATCC
CGCCGCCGCTGACTGGGACGTCCAGTCAGGCGTGCTTGCCTTTGGCGCAG
ATAACAATGTTGCTCTCTGGGATCCCCGAGAGAGCTCGCAGCGCGGGGTC
TATTCGCTTCTTGTCGGCCACACCGACAAGGTCAGTGTCGTTCGGTTCTA
CACATGCCCTTCCACCGGCACGAAACTTCTCTTGACTGGTTCTGTTGATC
ATACGGTCCGGTTATGGCGCCCCGATCCAGTAAATCCCCGCCAGTTCGTT
CACGCGCATACTTTGGAAGGACATACCGGCTCAGTCAATACTATCGCCGT
AGCTGAAGGATTAGACATTATCGCATCGGGCGCAGCTGATGCTAGTGTGA
AGATATGGAAGATCAGCGCGCAGGGAGAGCCAAAGGGCGAACTCTTGGAA
TCCATTCCCATGAAGCCACGCTTCTTTCCGTTGGCTTTGGCATTGACCCC
GCTCCAAACGGAGTCGAACGATAGACCTGTGGCTTTCGCGGTGGCAGGGA
CCACCAACATTGTGCAGATATATGCAGCAGAGAACACTCTTGTCGACCCC
GATTTCAAGCTTGCGGCTGTGCTGTCCGGACACGAGGCGTGGGTGCGCTC
CTTGTCTTTCACATCGGATAAGCAAAGCAAGATGGGCGATTTGCTGTTGG
CCTCGGCAAGCCAAGACAAGTATGTTCGACTCTGGCGATTCCAACGTGGA
GAGGTTACGCAGGCCACGCCGGCGTGTGATGATGATCCTATGCTGGGTGG
CTTCGAGCCCACGCTATCGAATAAGGCGCACCAGTTCACCGCGGCGGGGA
CCAAATACTCTGTTACATTCGAAGCTCTCTTGTTCGGAAATGAGGATTGG
ATTTACACGACTGCGTGGAACCCTGACCCGGAGCGCCAGCAACTCCTCAC
TGCATCGGCAGACAACACATTGACCATTTGGGAACAAGATCCGGTTTCGG
GAGTGTGGCTTTCTGCCGAAAGAATGGGAGAGATCAGTGTTCAGAAAGGT
TCCACTACAGCTACTGGTAGTACTGGTGGGTTCTGGATTGGTCTTTGGGC
CCCAGACGGCAAGCAAGTCGTGAGTCTGGGCCGCACTGGAAGCTGGCGCT
CGTGGAAGTATGATGCGGAAACCGATATGTGGGCGCAATCCTTGGGTATC
TCAGGGCATGTGCGGGCATCCAACGGGGTCCAATGGGAGCCTACTGGAGG
ATATCTCCTGTCGACAAGTGCGGATCAAACGACACGTCTGCATGCTCAGT
GGCTGCGTGATGGACTGAAGTCATGGCATGAATTTTCACGACCTCAGATT
CATGGATACGATTTGAATTGCGTGGATACCCTGGGCCCGGCTCGGTTCGT
GTCCGGCGCGGAAGAAAAGCTACTGCGAGTATTTAACGAGCCTGCGCCTA
TCGCACAGCTCCTAGAGAAGCTTTCGGGGTTCAAGCAGACGACCGAAGGG
GCATTATCGGACACGGCACAGATTCCCGTCCTAGGACTGTCTAACCAGGC
CCCGGCCGATGATGCGCCTACAGGTGAAGATGGAGTAGAGGGCGAGGAAG
TTGGCAAAGCTCAGGCCAATCAGGCGCTTTTGGCGGAATCGGAGCAACCG
CCATTGGAAGACCAGCTCGCTCGCTACACATTATGGCCAGAGCATGAGAA
GCTGTATGGTCACGGGTACGAGATCTCAGCCGTGGCTGTCAGCCACGACC
GCACACTTATTGCCACCGCTTGCAAGGCGAGCTCGATTGATCATGCCGTG
GTGCGTCTGTACGACACGTCAGACTGGCACGAGATTCGTCCATCTCTTGC
CGCGCACACCTTGACCATTACTAGTCTCGCCTTCTCCAGTGACGACCAGT
ACCTTCTGAGTGTCGGACGTGACCGGCAATGGGCTGTTTACGAACGCAGC
GAACAGGACCCCTCTACTTTCTCCCTTCTAATTTCGAACCCGAAGGGTCA
TTCCCGAATGATCCTCGATGCCGCATGGGCACCTGCGTCGGGAAAGCCCA
TCTTCGCAACCGCCGGCCGGGACAAGTCAGTGAAGCTGTGGCAGAAGACC
GAAGGCTCCTTTGAGTGCAAATCCACCATCCCGCTGACAACGCCTGTCAC
TGCACTGGCGTTCCTTCCGCAGATATATAGCAACTCCTTCTTCGTGGCCA
CGGGCGAGGAAAGCGGAGCAGTGTCTGTCTACCGAGTCGCAGTCGACAGC
CTGGAAGCCAGCCAATTGTCAAGCATCGATAAGCTTGCATCTCCTTCGAA
GGCGATCACGCAGCTGTCCTGGCGGCCGGTACCGGATGTAGATACACGGG
ATTTTGCACTGGCGGTAGCAAGTGAGGACACTTCAACTCGGATATATAGT
TTCTCGGACATGGTCTCATAAATGGTCTCCATCACGACCGAGTACATCAG
CGTCGGGGGCAATAGGCATCCCGCCGCCGCTGACTGGGACGTCCAGTCAG
GCGTGCTTGCCTTTGGCGCAGATAACAATGTTGCTCTCTGGGATCCCCGA
GAGAGCTCGCAGCGCGGGGTCTATTCGCTTCTTGTCGGCCACACCGACAA
GGTCAGTGTCGTTCGGTTCTACACATGCCCTTCCACCGGCACGAAACTTC
TCTTGACTGGTTCTGTTGATCATACGGTCCGGTTATGGCGCCCCGATCCA
GTAAATCCCCGCCAGTTCGTTCACGCGCATACTTTGGAAGGACATACCGG
CTCAGTCAATACTATCGCCGTAGCTGAAGGATTAGACATTATCGCATCGG
GCGCAGCTGATGCTAGTGTGAAGATATGGAAGATCAGCGCGCAGGGAGAG
CCAAAGGGCGAACTCTTGGAATCCATTCCCATGAAGCCACGCTTCTTTCC
GTTGGCTTTGGCATTGACCCCGCTCCAAACGGAGTCGAACGATAGACCTG
TGGCTTTCGCGGTGGCAGGGACCACCAACATTGTGCAGATATATGCAGCA
GAGAACACTCTTGTCGACCCCGATTTCAAGCTTGCGGCTGTGCTGTCCGG
ACACGAGGCGTGGGTGCGCTCCTTGTCTTTCACATCGGATAAGCAAAGCA
AGATGGGCGATTTGCTGTTGGCCTCGGCAAGCCAAGACAAGTATGTTCGA
CTCTGGCGATTCCAACGTGGAGAGGTTACGCAGGCCACGCCGGCGTGTGA
TGATGATCCTATGCTGGGTGGCTTCGAGCCCACGCTATCGAATAAGGCGC
ACCAGTTCACCGCGGCGGGGACCAAATACTCTGTTACATTCGAAGCTCTC
TTGTTCGGAAATGAGGATTGGATTTACACGACTGCGTGGAACCCTGACCC
GGAGCGCCAGCAACTCCTCACTGCATCGGCAGACAACACATTGACCATTT
GGGAACAAGATCCGGTTTCGGGAGTGTGGCTTTCTGCCGAAAGAATGGGA
GAGATCAGTGTTCAGAAAGGTTCCACTACAGCTACTGGTAGTACTGGTGG
GTTCTGGATTGGTCTTTGGGCCCCAGACGGCAAGCAAGTCGTGAGTCTGG
GCCGCACTGGAAGCTGGCGCTCGTGGAAGTATGATGCGGAAACCGATATG
TGGGCGCAATCCTTGGGTATCTCAGGGCATGTGCGGGCATCCAACGGGGT
CCAATGGGAGCCTACTGGAGGATATCTCCTGTCGACAAGTGCGGATCAAA
CGACACGTCTGCATGCTCAGTGGCTGCGTGATGGACTGAAGTCATGGCAT
GAATTTTCACGACCTCAGATTCATGGATACGATTTGAATTGCGTGGATAC
CCTGGGCCCGGCTCGGTTCGTGTCCGGCGCGGAAGAAAAGCTACTGCGAG
TATTTAACGAGCCTGCGCCTATCGCACAGCTCCTAGAGAAGCTTTCGGGG
TTCAAGCAGACGACCGAAGGGGCATTATCGGACACGGCACAGATTCCCGT
CCTAGGACTGTCTAACCAGGCCCCGGCCGATGATGCGCCTACAGGTGAAG
ATGGAGTAGAGGGCGAGGAAGTTGGCAAAGCTCAGGCCAATCAGGCGCTT
TTGGCGGAATCGGAGCAACCGCCATTGGAAGACCAGCTCGCTCGCTACAC
ATTATGGCCAGAGCATGAGAAGCTGTATGGTCACGGGTACGAGATCTCAG
CCGTGGCTGTCAGCCACGACCGCACACTTATTGCCACCGCTTGCAAGGCG
AGCTCGATTGATCATGCCGTGGTGCGTCTGTACGACACGTCAGACTGGCA
CGAGATTCGTCCATCTCTTGCCGCGCACACCTTGACCATTACTAGTCTCG
CCTTCTCCAGTGACGACCAGTACCTTCTGAGTGTCGGACGTGACCGGCAA
TGGGCTGTTTACGAACGCAGCGAACAGGACCCCTCTACTTTCTCCCTTCT
AATTTCGAACCCGAAGGGTCATTCCCGAATGATCCTCGATGCCGCATGGG
CACCTGCGTCGGGAAAGCCCATCTTCGCAACCGCCGGCCGGGACAAGTCA
GTGAAGCTGTGGCAGAAGACCGAAGGCTCCTTTGAGTGCAAATCCACCAT
CCCGCTGACAACGCCTGTCACTGCACTGGCGTTCCTTCCGCAGATATATA
GCAACTCCTTCTTCGTGGCCACGGGCGAGGAAAGCGGAGCAGTGTCTGTC
TACCGAGTCGCAGTCGACAGCCTGGAAGCCAGCCAATTGTCAAGCATCGA
TAAGCTTGCATCTCCTTCGAAGGCGATCACGCAGCTGTCCTGGCGGCCGG
TACCGGATGTAGATACACGGGATTTTGCACTGGCGGTAGCAAGTGAGGAC
ACTTCAACTCGGATATATAGTTTCTCGGACATGGTCTCATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_29880CAN33_29880Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29880-T1.exon1CAN33_29880-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_29880-T1.exon2CAN33_29880-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29880-T1.cdsCAN33_29880-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_29880-T1CAN33_29880-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
ProductWD domain G-beta repeat family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:111667..114172 +
Powered by Drupal