You are here

Home

CAN33_31375-T1, CAN33_31375-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_31375-T1
Unique NameCAN33_31375-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:1054905..1055949+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_31375-T1 ID=CAN33_31375-T1|Name=CAN33_31375-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1045bp|location=Sequence derived from alignment at NKJJ01000003.1:1054905..1055949+ (Aspergillus niger FDAARGOS_311)
ATGACTTCAGCAGTTCCACCAAAGAGCAAACCGCTGCCTCCGGGCATATA
TTGCCCAGTAATCTCTCTGTTCAAAGGGACACCGCGGCAGGAGATCGACT
ACGATGCTTCATACAAGTTCTTCACTCATCTCATCCGGAGTGGGATCCAC
GGAATCGTCCTCGCTGGCACAAATGCCGAGGCGGTTCTGCTTTCACCAAC
TGAGCGACAGGAGTTGGTGAGAACTGCTCGACGGGCGGCTGTGGATTTGG
GATTTGATGATTATCCTGTGGTGGCGGGAATTAGTGGGCAATCAACGAAC
GAGTCTCTTCGCCTCGCCGAAGACGCTCGTGAGGCAGGAGCAGACTTTGG
GCTACTTCTGCCGCCCAGCTACTGGCCTAAAGCAGTCACGAAAGACGTCA
TTCTGGACTTTTACACTGAGGTTGCAGACAGCAACCTTCTCCCAATCGTC
ATCTACAGCGTAAGCCCTCTTTCCACATATGATGCATGCATGAACTTTGG
CTGAATTAAGACCATAGTTTCCTGCTGTCTGCAATGGCGTGGACATGAAC
TCGGATGTCATGTCAGCCTTGGCTCAGCATCCCAACATTGTCGGGGTCAA
ATTGACATGTGGTAATGCTGGCAAGGTTACTCGGTTAACTCAGGAATATA
CACATGAACAATTTGGGGTATATGCTGGCTCATCTGACTGGCTCATCCCT
TGTCTCAGCGGGGGCGGATCAGGTTGCGTGACAGGAATTGCCAATGTTTT
CCCAAAGTCAACCGCCAAGTTATTCTCTCTGTGGAAGGCTGGGCAGATTG
AAGAAGCGCGAAAGTTACAGGGTCTGATATCACAGGCCGAAAAGGCCTGC
AAGGAAGGAATTGCGCCTACCAAATTTGCCGCGGCACACTTTGCCGGACC
CGTCGCAGGAGTGACGGACCAAGCAGCATTCCTCCCTCGAAAGCCGTATA
AAGCGTCATCACCGGCAACGCAGGAATGGGTAATCGGTGTGATGAAGCAT
CTTGTGGATATTGAGAATTCTTTGCCAGATGTGCGAGCGGAGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000003.1:1054905..1055949+

>CAN33_31375-T1 ID=CAN33_31375-T1|Name=CAN33_31375-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1974bp|location=Sequence derived from alignment at NKJJ01000003.1:1054905..1055949+ (Aspergillus niger FDAARGOS_311)
ATGACTTCAGCAGTTCCACCAAAGAGCAAACCGCTGCCTCCGGGCATATA
TTGCCCAGTAATCTCTCTGTTCAAAGGGACACCGCGGCAGGAGATCGACT
ACGATGCTTCATACAAGTTCTTCACTCATCTCATCCGGAGTGGGATCCAC
GGAATCGTCCTCGCTGGCACAAATGCCGAGGCGGTTCTGCTTTCACCAAC
TGAGCGACAGGAGTTGGTGAGAACTGCTCGACGGGCGGCTGTGGATTTGG
GATTTGATGATTATCCTGTGGTGGCGGGAATTAGTGGGCAATCAACGAAC
GAGTCTCTTCGCCTCGCCGAAGACGCTCGTGAGGCAGGAGCAGACTTTGG
GCTACTTCTGCCGCCCAGCTACTGGCCTAAAGCAGTCACGAAAGACGTCA
TTCTGGACTTTTACACTGAGGTTGCAGACAGCAACCTTCTCCCAATCGTC
ATCTACAGCTTTCCTGCTGTCTGCAATGGCGTGGACATGAACTCGGATGT
CATGTCAGCCTTGGCTCAGCATCCCAACATTGTCGGGGTCAAATTGACAT
GTGGTAATGCTGGCAAGGTTACTCGGTTAACTCAGGAATATACACATGAA
CAATTTGGGGTATATGCTGGCTCATCTGACTGGCTCATCCCTTGTCTCAG
CGGGGGCGGATCAGGTTGCGTGACAGGAATTGCCAATGTTTTCCCAAAGT
CAACCGCCAAGTTATTCTCTCTGTGGAAGGCTGGGCAGATTGAAGAAGCG
CGAAAGTTACAGGGTCTGATATCACAGGCCGAAAAGGCCTGCAAGGAAGG
AATTGCGCCTACCAAATTTGCCGCGGCACACTTTGCCGGACCCGTCGCAG
GAGTGACGGACCAAGCAGCATTCCTCCCTCGAAAGCCGTATAAAGCGTCA
TCACCGGCAACGCAGGAATGGGTAATCGGTGTGATGAAGCATCTTGTGGA
TATTGAGAATTCTTTGCCAGATGTGCGAGCGGAGTGAATGACTTCAGCAG
TTCCACCAAAGAGCAAACCGCTGCCTCCGGGCATATATTGCCCAGTAATC
TCTCTGTTCAAAGGGACACCGCGGCAGGAGATCGACTACGATGCTTCATA
CAAGTTCTTCACTCATCTCATCCGGAGTGGGATCCACGGAATCGTCCTCG
CTGGCACAAATGCCGAGGCGGTTCTGCTTTCACCAACTGAGCGACAGGAG
TTGGTGAGAACTGCTCGACGGGCGGCTGTGGATTTGGGATTTGATGATTA
TCCTGTGGTGGCGGGAATTAGTGGGCAATCAACGAACGAGTCTCTTCGCC
TCGCCGAAGACGCTCGTGAGGCAGGAGCAGACTTTGGGCTACTTCTGCCG
CCCAGCTACTGGCCTAAAGCAGTCACGAAAGACGTCATTCTGGACTTTTA
CACTGAGGTTGCAGACAGCAACCTTCTCCCAATCGTCATCTACAGCTTTC
CTGCTGTCTGCAATGGCGTGGACATGAACTCGGATGTCATGTCAGCCTTG
GCTCAGCATCCCAACATTGTCGGGGTCAAATTGACATGTGGTAATGCTGG
CAAGGTTACTCGGTTAACTCAGGAATATACACATGAACAATTTGGGGTAT
ATGCTGGCTCATCTGACTGGCTCATCCCTTGTCTCAGCGGGGGCGGATCA
GGTTGCGTGACAGGAATTGCCAATGTTTTCCCAAAGTCAACCGCCAAGTT
ATTCTCTCTGTGGAAGGCTGGGCAGATTGAAGAAGCGCGAAAGTTACAGG
GTCTGATATCACAGGCCGAAAAGGCCTGCAAGGAAGGAATTGCGCCTACC
AAATTTGCCGCGGCACACTTTGCCGGACCCGTCGCAGGAGTGACGGACCA
AGCAGCATTCCTCCCTCGAAAGCCGTATAAAGCGTCATCACCGGCAACGC
AGGAATGGGTAATCGGTGTGATGAAGCATCTTGTGGATATTGAGAATTCT
TTGCCAGATGTGCGAGCGGAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_31375CAN33_31375Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_31375-T1.exon1CAN33_31375-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_31375-T1.exon2CAN33_31375-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_31375-T1.cdsCAN33_31375-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_31375-T1CAN33_31375-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000031.2
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR002220
DBxrefPFAM:PF00701
ProductDihydrodipicolinate synthetase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:1054905..1055949 +
Powered by Drupal