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CAN33_0430-T1, CAN33_0430-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_0430-T1
Unique NameCAN33_0430-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:198363..199358-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_0430-T1 ID=CAN33_0430-T1|Name=CAN33_0430-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=996bp|location=Sequence derived from alignment at NKJJ01000004.1:198363..199358- (Aspergillus niger FDAARGOS_311)
ATGCTGGGCGCCAGGGATTCCGCCAGTTATGACTTCGCATTCTATCGCTA
TGACCCCAGTATGGGTGGCGCCGTTCTTTTCATCCTCCTGTTCATCGGCA
CAACAGGGTATCATGTCTTCCAAATGGTCAAGTCTCGCACATGGTTCTTC
ATCCCATTTGTGATCGGAGGTATATGTATGAGCACCTTCCAATGTGCGTG
AGTGTTGAACCATCATGCTAATTTTCCTAGTCGAGATTATCGGATATATC
GGACGTGCCATGTCTAGCAAGCAAAGTCCAAATTGGACGCTCGGACCCTA
CATCGTGCAGACGCTCTTTCTTTTACTCGCCCCAGCTCTCCTCGCAGCCT
CCATATACATGCTACTCGGTCGGATTATCCTTGTGTTACAAGCCGAATCA
CACGCTCTCTTGAAGAAGAAATGGTTAACCAAGATATTTGTCACGGGTGA
TGTCCTTTCATTTTTATTGCAGGGAGCGGGTACGTATCGCATAAGGCAAC
CCCATATTACCAAATAGTTCTCTGACCCTGACCAGGTGGCGGCATTCAGG
CCAGTGGAAGCCTGGCCGGCATGAAGAATGGCGAGCACATCATCGTCGTT
GGTCTCGTGATCCAAATATTCTTCTTCGCATTCTTTATGGTCACTGCGAC
GCACTTTTACTTGAAGGTCCATAAATATCCCTTCCCGCGATCTTGTTCTC
CACATATTCCTTGGAAGAAACACATGAAGGTACTCTATGCGACGAGCATA
TTGATCATGGTTCGATCCATGTTTCGATTGATTGAGTATATTCAGGGGAA
CAATGGGTACCTCTTACACCATGAAGCCTTTCTCTACATATTTGATGCAT
TGTTGATGTTTATCACCATGATAATATTCAATGCTGTCCATCCGCAAGAA
ATCGGTCAATTACTCCGTCATCCAAATGACTATAGTATGGCGACTCTTCC
AGAAGAGCAGGCTCCGAATCCTTACCAAGGCTGCAATAATGTGTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:198363..199358-

>CAN33_0430-T1 ID=CAN33_0430-T1|Name=CAN33_0430-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2637bp|location=Sequence derived from alignment at NKJJ01000004.1:198363..199358- (Aspergillus niger FDAARGOS_311)
GTGGCGGCATTCAGGCCAGTGGAAGCCTGGCCGGCATGAAGAATGGCGAG
CACATCATCGTCGTTGGTCTCGTGATCCAAATATTCTTCTTCGCATTCTT
TATGGTCACTGCGACGCACTTTTACTTGAAGGTCCATAAATATCCCTTCC
CGCGATCTTGTTCTCCACATATTCCTTGGAAGAAACACATGAAGGTACTC
TATGCGACGAGCATATTGATCATGGTTCGATCCATGTTTCGATTGATTGA
GTATATTCAGGGGAACAATGGGTACCTCTTACACCATGAAGCCTTTCTCT
ACATATTTGATGCATTGTTGATGTTTATCACCATGATAATATTCAATGCT
GTCCATCCGCAAGAAATCGGTCAATTACTCCGTCATCCAAATGACTATAG
TATGGCGACTCTTCCAGAAGAGCAGGCTCCGAATCCTTACCAAGGCTGCA
ATAATGTGTGATCGAGATTATCGGATATATCGGACGTGCCATGTCTAGCA
AGCAAAGTCCAAATTGGACGCTCGGACCCTACATCGTGCAGACGCTCTTT
CTTTTACTCGCCCCAGCTCTCCTCGCAGCCTCCATATACATGCTACTCGG
TCGGATTATCCTTGTGTTACAAGCCGAATCACACGCTCTCTTGAAGAAGA
AATGGTTAACCAAGATATTTGTCACGGGTGATGTCCTTTCATTTTTATTG
CAGGGAGCGGATGCTGGGCGCCAGGGATTCCGCCAGTTATGACTTCGCAT
TCTATCGCTATGACCCCAGTATGGGTGGCGCCGTTCTTTTCATCCTCCTG
TTCATCGGCACAACAGGGTATCATGTCTTCCAAATGGTCAAGTCTCGCAC
ATGGTTCTTCATCCCATTTGTGATCGGAGGTGGCGGCATTCAGGCCAGTG
GAAGCCTGGCCGGCATGAAGAATGGCGAGCACATCATCGTCGTTGGTCTC
GTGATCCAAATATTCTTCTTCGCATTCTTTATGGTCACTGCGACGCACTT
TTACTTGAAGGTCCATAAATATCCCTTCCCGCGATCTTGTTCTCCACATA
TTCCTTGGAAGAAACACATGAAGGTACTCTATGCGACGAGCATATTGATC
ATGGTTCGATCCATGTTTCGATTGATTGAGTATATTCAGGGGAACAATGG
GTACCTCTTACACCATGAAGCCTTTCTCTACATATTTGATGCATTGTTGA
TGTTTATCACCATGATAATATTCAATGCTGTCCATCCGCAAGAAATCGGT
CAATTACTCCGTCATCCAAATGACTATAGTATGGCGACTCTTCCAGAAGA
GCAGGCTCCGAATCCTTACCAAGGCTGCAATAATGTGTGATCGAGATTAT
CGGATATATCGGACGTGCCATGTCTAGCAAGCAAAGTCCAAATTGGACGC
TCGGACCCTACATCGTGCAGACGCTCTTTCTTTTACTCGCCCCAGCTCTC
CTCGCAGCCTCCATATACATGCTACTCGGTCGGATTATCCTTGTGTTACA
AGCCGAATCACACGCTCTCTTGAAGAAGAAATGGTTAACCAAGATATTTG
TCACGGGTGATGTCCTTTCATTTTTATTGCAGGGAGCGGATGCTGGGCGC
CAGGGATTCCGCCAGTTATGACTTCGCATTCTATCGCTATGACCCCAGTA
TGGGTGGCGCCGTTCTTTTCATCCTCCTGTTCATCGGCACAACAGGGTAT
CATGTCTTCCAAATGGTCAAGTCTCGCACATGGTTCTTCATCCCATTTGT
GATCGGAGGTGGCGGCATTCAGGCCAGTGGAAGCCTGGCCGGCATGAAGA
ATGGCGAGCACATCATCGTCGTTGGTCTCGTGATCCAAATATTCTTCTTC
GCATTCTTTATGGTCACTGCGACGCACTTTTACTTGAAGGTCCATAAATA
TCCCTTCCCGCGATCTTGTTCTCCACATATTCCTTGGAAGAAACACATGA
AGGTACTCTATGCGACGAGCATATTGATCATGGTTCGATCCATGTTTCGA
TTGATTGAGTATATTCAGGGGAACAATGGGTACCTCTTACACCATGAAGC
CTTTCTCTACATATTTGATGCATTGTTGATGTTTATCACCATGATAATAT
TCAATGCTGTCCATCCGCAAGAAATCGGTCAATTACTCCGTCATCCAAAT
GACTATAGTATGGCGACTCTTCCAGAAGAGCAGGCTCCGAATCCTTACCA
AGGCTGCAATAATGTGTGATCGAGATTATCGGATATATCGGACGTGCCAT
GTCTAGCAAGCAAAGTCCAAATTGGACGCTCGGACCCTACATCGTGCAGA
CGCTCTTTCTTTTACTCGCCCCAGCTCTCCTCGCAGCCTCCATATACATG
CTACTCGGTCGGATTATCCTTGTGTTACAAGCCGAATCACACGCTCTCTT
GAAGAAGAAATGGTTAACCAAGATATTTGTCACGGGTGATGTCCTTTCAT
TTTTATTGCAGGGAGCGGATGCTGGGCGCCAGGGATTCCGCCAGTTATGA
CTTCGCATTCTATCGCTATGACCCCAGTATGGGTGGCGCCGTTCTTTTCA
TCCTCCTGTTCATCGGCACAACAGGGTATCATGTCTTCCAAATGGTCAAG
TCTCGCACATGGTTCTTCATCCCATTTGTGATCGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_0430CAN33_0430Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0430-T1CAN33_0430-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0430-T1.cdsCAN33_0430-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_0430-T1.exon3CAN33_0430-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_0430-T1.exon2CAN33_0430-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_0430-T1.exon1CAN33_0430-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000041.4
NoteEggNog:ENOG41
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
ProductRTA1 like protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:198363..199358 -
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