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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:1460884..1461997- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_2380-T1 ID=CAN33_2380-T1|Name=CAN33_2380-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1114bp|location=Sequence derived from alignment at NKJJ01000004.1:1460884..1461997- (Aspergillus niger FDAARGOS_311)
ATGACGCCGTTTGAAGAATTGAGGAGGTTATTGCTTGAGCACTACCATTT
TACGGCAAGTATGTCGTGCATGGTTTACTGTCAGAACATCGTGAAGCCCG
CCTCATCTTCGATCTAGATTTGAACAGTATCACGTGGCGATAAGATCCAT
CCGATAAGCCTTTGGATTTGCGCTTCTTTTTGCCCGTCGCGGTCACCACT
CCAGCATTCGTGAATCTCCACGCTTTTCTTCCCCCCAAAACCACTGCAGG
CCCCAGTGGTAAACACACATCCAACATGTCATCTCCTCTGGTTCTCCTTC
CCGGGGACGAGATCCCTCAGAATACCTCCCATCCACCAATTCCGCACCAT
TGAGACTTGGCCCCGGTCTCCGTCTACTTTCGCAACCGCCTTCTTCTTCC
CCTCAAGCATCATCCTCCCACAGCCATGTCCTCACAGCCACACAAGCCGG
CATTCTCTCTACAGACACCAAGCGGAATGCTGTATCTATCCTCTCCACTC
CGAATCGCCGCTATATCCCTACCGTCAATGACCTGGTCATCGCACAGGTC
CACCACTCCAGTGTGGATTACTTTCACTGCATGATCACTCCGCAAGCGCC
CCATGCAGTACTAGGACAACTGTCTTTTGAAGGCGCGACGAAGAAGACCC
GTCCTATGCTGAAACAAGGAGATTTGGTTTACGCGCGTGTGCTTTCGGTC
GGCCTGGGTGCGGGCGCGGAGGTTGAGCTGGCCTGTGTGAACCCTGCGAC
GGGCAAGGCTGAACCTGGAGGACTCGGTCAATTGAACGGGGGAATGGTGT
TTGATATCTCTACTGGAATGGCTGCGAGGCTGATGAGGGCCAGCTCATCT
TCTTCTGAATCACAGGAGGGTGTGGCCGGGTTGGTGGTGTTGGACGAACT
GGGCAAGAAGCTGGAGAAATCGGGCGGCTTCGAGATCGCCGTGGGAAGGA
ATGGTAAAGTCTGGGTCGACTGTTCTAGTGGAGGTGAAACTTCGGTCAAG
GCGACGGTAGCTGTTGGACGGTGTCTGACTACGATCGATGAGCATGATTT
GAGCCCGGCGGATCAGAAGAAGTTGGTGTCGAGGATATTGCGCGAGATGA
AGATTGAGGTATAG back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:1460884..1461997- >CAN33_2380-T1 ID=CAN33_2380-T1|Name=CAN33_2380-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1704bp|location=Sequence derived from alignment at NKJJ01000004.1:1460884..1461997- (Aspergillus niger FDAARGOS_311)
AATACCTCCCATCCACCAATTCCGCACCATTGAGACTTGGCCCCGGTCTC
CGTCTACTTTCGCAACCGCCTTCTTCTTCCCCTCAAGCATCATCCTCCCA
CAGCCATGTCCTCACAGCCACACAAGCCGGCATTCTCTCTACAGACACCA
AGCGGAATGCTGTATCTATCCTCTCCACTCCGAATCGCCGCTATATCCCT
ACCGTCAATGACCTGGTCATCGCACAGGTCCACCACTCCAGTGTGGATTA
CTTTCACTGCATGATCACTCCGCAAGCGCCCCATGCAGTACTAGGACAAC
TGTCTTTTGAAGGCGCGACGAAGAAGACCCGTCCTATGCTGAAACAAGGA
GATTTGGTTTACGCGCGTGTGCTTTCGGTCGGCCTGGGTGCGGGCGCGGA
GGTTGAGCTGGCCTGTGTGAACCCTGCGACGGGCAAGGCTGAACCTGGAG
GACTCGGTCAATTGAACGGGGGAATGGTGTTTGATATCTCTACTGGAATG
GCTGCGAGGCTGATGAGGGCCAGCTCATCTTCTTCTGAATCACAGGAGGG
TGTGGCCGGGTTGGTGGTGTTGGACGAACTGGGCAAGAAGCTGGAGAAAT
CGGGCGGCTTCGAGATCGCCGTGGGAAGGAATGGTAAAGTCTGGGTCGAC
TGTTCTAGTGGAGGTGAAACTTCGGTCAAGGCGACGGTAGCTGTTGGACG
GTGTCTGACTACGATCGATGAGCATGATTTGAGCCCGGCGGATCAGAAGA
AGTTGGTGTCGAGGATATTGCGCGAGATGAAGATTGAGGTATAGATGACG
CCGTTTGAAGAATTGAGGAGGTTATTGCTTGAGCACTACCATTTTACGGC
AAAATACCTCCCATCCACCAATTCCGCACCATTGAGACTTGGCCCCGGTC
TCCGTCTACTTTCGCAACCGCCTTCTTCTTCCCCTCAAGCATCATCCTCC
CACAGCCATGTCCTCACAGCCACACAAGCCGGCATTCTCTCTACAGACAC
CAAGCGGAATGCTGTATCTATCCTCTCCACTCCGAATCGCCGCTATATCC
CTACCGTCAATGACCTGGTCATCGCACAGGTCCACCACTCCAGTGTGGAT
TACTTTCACTGCATGATCACTCCGCAAGCGCCCCATGCAGTACTAGGACA
ACTGTCTTTTGAAGGCGCGACGAAGAAGACCCGTCCTATGCTGAAACAAG
GAGATTTGGTTTACGCGCGTGTGCTTTCGGTCGGCCTGGGTGCGGGCGCG
GAGGTTGAGCTGGCCTGTGTGAACCCTGCGACGGGCAAGGCTGAACCTGG
AGGACTCGGTCAATTGAACGGGGGAATGGTGTTTGATATCTCTACTGGAA
TGGCTGCGAGGCTGATGAGGGCCAGCTCATCTTCTTCTGAATCACAGGAG
GGTGTGGCCGGGTTGGTGGTGTTGGACGAACTGGGCAAGAAGCTGGAGAA
ATCGGGCGGCTTCGAGATCGCCGTGGGAAGGAATGGTAAAGTCTGGGTCG
ACTGTTCTAGTGGAGGTGAAACTTCGGTCAAGGCGACGGTAGCTGTTGGA
CGGTGTCTGACTACGATCGATGAGCATGATTTGAGCCCGGCGGATCAGAA
GAAGTTGGTGTCGAGGATATTGCGCGAGATGAAGATTGAGGTATAGATGA
CGCCGTTTGAAGAATTGAGGAGGTTATTGCTTGAGCACTACCATTTTACG
GCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264XJC |
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR004088 |
| DBxref | InterPro:IPR036612 |
| DBxref | InterPro:IPR041054 |
| DBxref | PFAM:PF18311 |
| DBxref | PFAM:PF15985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:1460884..1461997 - |
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