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CAN33_3400-T1, CAN33_3400-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3400-T1
Unique NameCAN33_3400-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:2173937..2175016+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3400-T1 ID=CAN33_3400-T1|Name=CAN33_3400-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1080bp|location=Sequence derived from alignment at NKJJ01000004.1:2173937..2175016+ (Aspergillus niger FDAARGOS_311)
ATGCCAGGGACCATCCTCCTCACCGGAGCCAACAGCTCCCTCGCCATCCC
AGCAGTCCACCACTTCCTCACCAAATACCCAGACTACACTCTCGTCCTTA
CCGTTCGCAACCCCTCCACTTCCGACCCCAACACCAAGCGTCTCAACGAC
ACCATCACGCCCTTCTCCAGTCCAAGTACCTCAATCCGAAAACTAGACCT
CTCCAACCTCTCCGAAGTATCGACCTTCGCGCAGACCCTAGCAACTGAAA
TATCCAATGGCACACTTCCTCCATTAGCAAGCATCATCTGCAATGCATAC
TACTGGAACCTCGCCAGCGAAGTCGAAACAACCCCCGACGAACTGGACAA
GACCTTCCAGGTAAACCATATCGCTCACGCCTCGTTAGTGCTACGTCTGC
TAGGCTCATTTGGGCCTGATTCTGGCCGGGTTGTTCTCTTCGGCAGTGAT
GCCCATTGGCCCGGTAAGAATGGGTTGGAGAAGTATCCGCCTACCATTCC
AGAGGATCTGGAGGTGCTGGTGAAACCGACTAAGAAGGCGGGTGAGGATG
TTAGGGGGAAGGGGTTCTATCAGTATGCAGTGTCGAAGCTGGCGATTATT
ATGTGGATGTATGCGTTGAATGGGCAGTTGATCAAGGTATAATATCTTCC
CCACTTTGCTTTGCTTTGAGTAAGTAGTAGACTTTGGTGGTTGTACTGAC
ATTGGGATTAACTTCAGGACGACAACCTAAAGCACATCAAGGCTGTAGCT
ATCAATCCAGGCAACCTGAGTGATTCTCGCGCTCTCCGCACCAACACGCC
TCTGATACTTAGGATCATCTCCCGCCTCATTATCCAGCCGCTCCGGCCGC
TGCTGAGACTACTTGACCCGACTATGCGCACGGCTACGGAGGCTGGGGAG
GATGTGGTCGAGTTGGCTGTGGGTGAGAAATATGCGGGGGAGGCGGGGTA
CTTCACCCTTTTGAAGAAGGATGAGAGTTCGCCTGAGAGTCAGGATGGAG
AGAAGCAGGGGAAGATCTGGAAGAAGACGTTGGAGTGGGCGCAGGTTAGC
CCTAAGGATACGGTGTTGAAGCTTGAGTAG
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Coding sequence (CDS) from alignment at NKJJ01000004.1:2173937..2175016+

>CAN33_3400-T1 ID=CAN33_3400-T1|Name=CAN33_3400-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1998bp|location=Sequence derived from alignment at NKJJ01000004.1:2173937..2175016+ (Aspergillus niger FDAARGOS_311)
ATGCCAGGGACCATCCTCCTCACCGGAGCCAACAGCTCCCTCGCCATCCC
AGCAGTCCACCACTTCCTCACCAAATACCCAGACTACACTCTCGTCCTTA
CCGTTCGCAACCCCTCCACTTCCGACCCCAACACCAAGCGTCTCAACGAC
ACCATCACGCCCTTCTCCAGTCCAAGTACCTCAATCCGAAAACTAGACCT
CTCCAACCTCTCCGAAGTATCGACCTTCGCGCAGACCCTAGCAACTGAAA
TATCCAATGGCACACTTCCTCCATTAGCAAGCATCATCTGCAATGCATAC
TACTGGAACCTCGCCAGCGAAGTCGAAACAACCCCCGACGAACTGGACAA
GACCTTCCAGGTAAACCATATCGCTCACGCCTCGTTAGTGCTACGTCTGC
TAGGCTCATTTGGGCCTGATTCTGGCCGGGTTGTTCTCTTCGGCAGTGAT
GCCCATTGGCCCGGTAAGAATGGGTTGGAGAAGTATCCGCCTACCATTCC
AGAGGATCTGGAGGTGCTGGTGAAACCGACTAAGAAGGCGGGTGAGGATG
TTAGGGGGAAGGGGTTCTATCAGTATGCAGTGTCGAAGCTGGCGATTATT
ATGTGGATGTATGCGTTGAATGGGCAGTTGATCAAGGACGACAACCTAAA
GCACATCAAGGCTGTAGCTATCAATCCAGGCAACCTGAGTGATTCTCGCG
CTCTCCGCACCAACACGCCTCTGATACTTAGGATCATCTCCCGCCTCATT
ATCCAGCCGCTCCGGCCGCTGCTGAGACTACTTGACCCGACTATGCGCAC
GGCTACGGAGGCTGGGGAGGATGTGGTCGAGTTGGCTGTGGGTGAGAAAT
ATGCGGGGGAGGCGGGGTACTTCACCCTTTTGAAGAAGGATGAGAGTTCG
CCTGAGAGTCAGGATGGAGAGAAGCAGGGGAAGATCTGGAAGAAGACGTT
GGAGTGGGCGCAGGTTAGCCCTAAGGATACGGTGTTGAAGCTTGAGTAGA
TGCCAGGGACCATCCTCCTCACCGGAGCCAACAGCTCCCTCGCCATCCCA
GCAGTCCACCACTTCCTCACCAAATACCCAGACTACACTCTCGTCCTTAC
CGTTCGCAACCCCTCCACTTCCGACCCCAACACCAAGCGTCTCAACGACA
CCATCACGCCCTTCTCCAGTCCAAGTACCTCAATCCGAAAACTAGACCTC
TCCAACCTCTCCGAAGTATCGACCTTCGCGCAGACCCTAGCAACTGAAAT
ATCCAATGGCACACTTCCTCCATTAGCAAGCATCATCTGCAATGCATACT
ACTGGAACCTCGCCAGCGAAGTCGAAACAACCCCCGACGAACTGGACAAG
ACCTTCCAGGTAAACCATATCGCTCACGCCTCGTTAGTGCTACGTCTGCT
AGGCTCATTTGGGCCTGATTCTGGCCGGGTTGTTCTCTTCGGCAGTGATG
CCCATTGGCCCGGTAAGAATGGGTTGGAGAAGTATCCGCCTACCATTCCA
GAGGATCTGGAGGTGCTGGTGAAACCGACTAAGAAGGCGGGTGAGGATGT
TAGGGGGAAGGGGTTCTATCAGTATGCAGTGTCGAAGCTGGCGATTATTA
TGTGGATGTATGCGTTGAATGGGCAGTTGATCAAGGACGACAACCTAAAG
CACATCAAGGCTGTAGCTATCAATCCAGGCAACCTGAGTGATTCTCGCGC
TCTCCGCACCAACACGCCTCTGATACTTAGGATCATCTCCCGCCTCATTA
TCCAGCCGCTCCGGCCGCTGCTGAGACTACTTGACCCGACTATGCGCACG
GCTACGGAGGCTGGGGAGGATGTGGTCGAGTTGGCTGTGGGTGAGAAATA
TGCGGGGGAGGCGGGGTACTTCACCCTTTTGAAGAAGGATGAGAGTTCGC
CTGAGAGTCAGGATGGAGAGAAGCAGGGGAAGATCTGGAAGAAGACGTTG
GAGTGGGCGCAGGTTAGCCCTAAGGATACGGTGTTGAAGCTTGAGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_3400CAN33_3400Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3400-T1.exon1CAN33_3400-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_3400-T1.exon2CAN33_3400-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3400-T1.cdsCAN33_3400-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3400-T1CAN33_3400-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:2173937..2175016 +
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