|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:114910..118295+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_33065-T1 ID=CAN33_33065-T1|Name=CAN33_33065-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=3386bp|location=Sequence derived from alignment at NKJJ01000007.1:114910..118295+ (Aspergillus niger FDAARGOS_311)
ATGGACCATCGAACTTTCGTGTCGGATTCGCTCCTCCGCCTTACGAACGC
GTCGGATCCTACTGTCGTCGACTTCGTGCTTGCCACCGCCAGTTCCGCTA
AGTCAGCTTCCGCTTTGCAAGACAAGCTACTCCCTTTCCTGGACGGCAGC
TCCGATGACATTAGCTCGTTTTGCGGCGAACTTTACAGACGGGTTGGGGT
GAGGGCCGGGTCCAGCGCTACCAGTGCCAATGTGGCAAGTAAAGAGCGCA
GTGATGCCGTGTCATCAAAGAAGAAATATCGACTGCTAGAGATGGAGGAG
GATGACGTACCGGACGCTCGGGGTCACTAGGCCCTGTGAATGTCGAGGCG
GAACGGGACAGACGGCGACGCAGAGATAAAGATCGGAGCAATGGACGCAG
CAGTAAGGATGGCGAGAGCGGTCGCAGCCGCTGGGAAAAGGACGAGAGCC
GCAAACGCGATCGCAGTCGGGAAGAGGAATCGCGCGACCGGCCCCGGACG
AAGAAGGTACGGCGACGGAATGCCGATGACTTTGATGATCGCTGGGGAGA
TGAGGAGATACCTGAAGATGAGCTATACGAGGATGATGAGCAGGCGGGCG
AATTTGAGGAGTCGCCTTCGAAACGGAGTCGGTTAGAGGATGGGTCTGCG
TCGCCACGGTCAAATGCCTCTGAGGAATTGGATCCGGAGACGAAGAAGGA
ACAAGACCGGAAACGGGATCTCGAAGAACGAGATGAGTTTGCGAAACGCC
TTGCTAAGAAGGATGATGGCAAAACGAAGAAGATCGTCGAGGATCGGACA
AGGTCTGGTGAGGCTGCGCGGCGACGAGCGTTGGCGGATGATGCGTCTGC
GCGGGCGGCTGTCATGCCAGACCTGAGGATGCGCTCTCGACAGGAATATT
TGAAGAAGCGTGAGACGGAGCGGTTGGCCCTCTTGCGCAGACAGGTCGCC
GAGGAGACGGCAGAGCTGCGCGATAATCCCAGTTTGACTCGCAAGGAGAA
GGAGGAGTTCGCGCGCAATCGAGAAGTTCTGCGGATCGCGGAGGAGCGGT
TGCGGATTGACGACTATCGTGATGGTTACATGATGCCCGAGGACTACATT
ACGGAGAAGGGCAAGATCGATCGGAAGAAGAAGGAGGACGCGCTCTACAA
ACGTTATGTGGATCGTGATGACGCTGGTCAAGAGCGGTTCATTACGGAGC
ACGAAGAATGGGAAATGGAGCAGACAGCCAAGGCTAAGGCACAGATCAAT
CGGGCTGAATTCGTTGACGAGGGCAATTATGAGTATGTGTTTGACGATTC
GCAGAAGATCAACTTCGTTGTGGACGCCAAGATGGAAGGCACTCGGAAGC
CTATGACGCAGGAGCAGCGCAGGCTTCAGGAGCAGATTGATGCGGCGGAG
AAGAAAGCACAGTCGATGGAGGACACGCGAAAGAGCCTGCCCATCTATCA
ATTTCGAGACCAGATCATTCAGGCAGTGCACGACCACCAAGTCTTGATTA
TCGTGGGAGAGACTGGTTCGGGTAAGACGACGCAGATTCCGCAGTACCTT
CACGAGGCTGGATTCACCAAGGGCGGCATGAAGGTTGGATGTACCCAACC
ACGTCGAGTTGCTGCCATGAGTGTGGCTTCTCGAGTGGCGGAAGAAATGG
GGGTGAAGCTGGGGAACGAGGTTGGCTACGCCATTCGATTCGAGGACAAC
ACCAGCGACAAGACAGTGCTCAAGTACATGACGGATGGTATGTTGCTGCG
TGAGCTATTGACGGAGCCCGATCTCGGCCAGTACTCTGCATTGATGATTG
ATGAAGCCCACGAGCGAACGGTGCCCACGGACATCGCCTGTGGTCTTCTG
AAGGATATTGCGAAGGCACGGCCAGATCTCAAACTGCTGATCTCCTCCGC
CACGATGGATGCTCAGAAGTTCCAGCAGTATTTTGATGATGCTCCGATCT
TCAACATCCCCGGTCGTCGGTACCCTGTCGATATTCATTACACATCTCAG
CCGGAAGCGAATTACCTGGCTGCAGCCATCACGACGGTCTTTCAAATCCA
TGTCACTCAGGGATCTGGAGATATCCTCGTCTTCTTGACAGGTCAAGAAG
AGATTGAGGCGGCGGAACAGAGTCTCCAGGAAACGTCACGAAAATTAGGG
AACAAGATACCCGAAATGATCATATGTCCAATCTACGCCAACCTCCCGTC
CGAGCTACAGACTAAGATCTTCGAGCCGACGCCGCCAAAGGCACGGAAGG
TCGTGTTGGCAACAAACATTGCTGAAACCAGTTTGACCATTGACGGCATT
GTCTACGTGATTGACCCAGGATTTGTCAAGGAGAATGTCTTCAACCCGCG
GACGGGTATGGAAAGTTTAGTCGTAACTCCCTGCTCGCGAGCTTCCGCCA
ACCAAAGAGCCGGTCGTGCTGGACGTGTTGGTCCGGGCAAGTGTTTCCGA
CTCTACACCAAGTGGGCATACTACAATGAGTTGGAGGAAAGCACGACTCC
CGAGATCCAGCGGACCAATCTGAGCAGTGTCATCTTGATGCTGAAGTCCC
TGGGGATCGACCAGCTGCTGGACTTCGACTTCATGGACCCTCCTCCGGCG
GAGACCATCATTCGTGCGCTGGAGCAGCTGTATGCGTTGGGGGCTCTGAA
CGATCGAGGCGAGCTGACAAAGATTGGGCGACAGATGGCCGAATTCCCAA
CAGATCCCATGCTGGCCAAGGCGATTCTAGCAGCCGATAAATACGGCTGT
GTGGAAGAAGTGTTGTCTATCGTGTCGATGCTGGGCGAGGCGAGCGCGCT
CTTCTTCCGACCCAAGGACAAGAAGATTCACGCGGACAGCGCGCGGAATC
GCTTCACCATTAAAGATGGCGGCGACCATCTCACGCTGCTCAATATCTGG
AACCAATGGGTCGACTCCGACTTCAGCTATGTCTGGGCCAAGGAAAACTT
CCTCCAGCAGCGGAGTCTGACGAGAGCGCGCGATGTCCGCGACCAGCTCG
CGAAGCTATGTGATCGCGTCGAGGTGTCCGTGAGCACGTGCGGCTCCAAC
AATATGCAGCCGATTCAGAAGGCCATCACAGCCGGATTCTTCCCGAACGC
GGCACGACTGCAGCGAGGCGGCGACAGCTATCGCACAGTTAAGAATGGAC
AGACGGTTTACCTCCACCCGTCGAGCACGCTGTTCGAAGTCAACCCGCGG
TGGGTGATTTACTTCGAGCTGGTGCTGACCAGCAAGGAGTATATGCGCAG
CAACATGCCATTGCAGGCGGAGTGGCTGGTCGAGGTGGCGCCACACTATT
ACAAGAAGAAGGATCTGGAGACGCTGGGGTTGGAGAAGAAGATGGCGAAG
GGGCAGGGGGCGGCAGGCGAAAAGAGTCGGAATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:114910..118295+ >CAN33_33065-T1 ID=CAN33_33065-T1|Name=CAN33_33065-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6690bp|location=Sequence derived from alignment at NKJJ01000007.1:114910..118295+ (Aspergillus niger FDAARGOS_311)
ATGGACCATCGAACTTTCGTGTCGGATTCGCTCCTCCGCCTTACGAACGC
GTCGGATCCTACTGTCGTCGACTTCGTGCTTGCCACCGCCAGTTCCGCTA
AGTCAGCTTCCGCTTTGCAAGACAAGCTACTCCCTTTCCTGGACGGCAGC
TCCGATGACATTAGCTCGTTTTGCGGCGAACTTTACAGACGGGTTGGGGT
GAGGGCCGGGTCCAGCGCTACCAGTGCCAATGTGGCAAGTAAAGAGCGCA
GTGATGCCGTGTCATCAAAGAAGAAATATCGACTGCTAGAGATGGAGGAG
GATGACGCGGAACGGGACAGACGGCGACGCAGAGATAAAGATCGGAGCAA
TGGACGCAGCAGTAAGGATGGCGAGAGCGGTCGCAGCCGCTGGGAAAAGG
ACGAGAGCCGCAAACGCGATCGCAGTCGGGAAGAGGAATCGCGCGACCGG
CCCCGGACGAAGAAGGTACGGCGACGGAATGCCGATGACTTTGATGATCG
CTGGGGAGATGAGGAGATACCTGAAGATGAGCTATACGAGGATGATGAGC
AGGCGGGCGAATTTGAGGAGTCGCCTTCGAAACGGAGTCGGTTAGAGGAT
GGGTCTGCGTCGCCACGGTCAAATGCCTCTGAGGAATTGGATCCGGAGAC
GAAGAAGGAACAAGACCGGAAACGGGATCTCGAAGAACGAGATGAGTTTG
CGAAACGCCTTGCTAAGAAGGATGATGGCAAAACGAAGAAGATCGTCGAG
GATCGGACAAGGTCTGGTGAGGCTGCGCGGCGACGAGCGTTGGCGGATGA
TGCGTCTGCGCGGGCGGCTGTCATGCCAGACCTGAGGATGCGCTCTCGAC
AGGAATATTTGAAGAAGCGTGAGACGGAGCGGTTGGCCCTCTTGCGCAGA
CAGGTCGCCGAGGAGACGGCAGAGCTGCGCGATAATCCCAGTTTGACTCG
CAAGGAGAAGGAGGAGTTCGCGCGCAATCGAGAAGTTCTGCGGATCGCGG
AGGAGCGGTTGCGGATTGACGACTATCGTGATGGTTACATGATGCCCGAG
GACTACATTACGGAGAAGGGCAAGATCGATCGGAAGAAGAAGGAGGACGC
GCTCTACAAACGTTATGTGGATCGTGATGACGCTGGTCAAGAGCGGTTCA
TTACGGAGCACGAAGAATGGGAAATGGAGCAGACAGCCAAGGCTAAGGCA
CAGATCAATCGGGCTGAATTCGTTGACGAGGGCAATTATGAGTATGTGTT
TGACGATTCGCAGAAGATCAACTTCGTTGTGGACGCCAAGATGGAAGGCA
CTCGGAAGCCTATGACGCAGGAGCAGCGCAGGCTTCAGGAGCAGATTGAT
GCGGCGGAGAAGAAAGCACAGTCGATGGAGGACACGCGAAAGAGCCTGCC
CATCTATCAATTTCGAGACCAGATCATTCAGGCAGTGCACGACCACCAAG
TCTTGATTATCGTGGGAGAGACTGGTTCGGGTAAGACGACGCAGATTCCG
CAGTACCTTCACGAGGCTGGATTCACCAAGGGCGGCATGAAGGTTGGATG
TACCCAACCACGTCGAGTTGCTGCCATGAGTGTGGCTTCTCGAGTGGCGG
AAGAAATGGGGGTGAAGCTGGGGAACGAGGTTGGCTACGCCATTCGATTC
GAGGACAACACCAGCGACAAGACAGTGCTCAAGTACATGACGGATGGTAT
GTTGCTGCGTGAGCTATTGACGGAGCCCGATCTCGGCCAGTACTCTGCAT
TGATGATTGATGAAGCCCACGAGCGAACGGTGCCCACGGACATCGCCTGT
GGTCTTCTGAAGGATATTGCGAAGGCACGGCCAGATCTCAAACTGCTGAT
CTCCTCCGCCACGATGGATGCTCAGAAGTTCCAGCAGTATTTTGATGATG
CTCCGATCTTCAACATCCCCGGTCGTCGGTACCCTGTCGATATTCATTAC
ACATCTCAGCCGGAAGCGAATTACCTGGCTGCAGCCATCACGACGGTCTT
TCAAATCCATGTCACTCAGGGATCTGGAGATATCCTCGTCTTCTTGACAG
GTCAAGAAGAGATTGAGGCGGCGGAACAGAGTCTCCAGGAAACGTCACGA
AAATTAGGGAACAAGATACCCGAAATGATCATATGTCCAATCTACGCCAA
CCTCCCGTCCGAGCTACAGACTAAGATCTTCGAGCCGACGCCGCCAAAGG
CACGGAAGGTCGTGTTGGCAACAAACATTGCTGAAACCAGTTTGACCATT
GACGGCATTGTCTACGTGATTGACCCAGGATTTGTCAAGGAGAATGTCTT
CAACCCGCGGACGGGTATGGAAAGTTTAGTCGTAACTCCCTGCTCGCGAG
CTTCCGCCAACCAAAGAGCCGGTCGTGCTGGACGTGTTGGTCCGGGCAAG
TGTTTCCGACTCTACACCAAGTGGGCATACTACAATGAGTTGGAGGAAAG
CACGACTCCCGAGATCCAGCGGACCAATCTGAGCAGTGTCATCTTGATGC
TGAAGTCCCTGGGGATCGACCAGCTGCTGGACTTCGACTTCATGGACCCT
CCTCCGGCGGAGACCATCATTCGTGCGCTGGAGCAGCTGTATGCGTTGGG
GGCTCTGAACGATCGAGGCGAGCTGACAAAGATTGGGCGACAGATGGCCG
AATTCCCAACAGATCCCATGCTGGCCAAGGCGATTCTAGCAGCCGATAAA
TACGGCTGTGTGGAAGAAGTGTTGTCTATCGTGTCGATGCTGGGCGAGGC
GAGCGCGCTCTTCTTCCGACCCAAGGACAAGAAGATTCACGCGGACAGCG
CGCGGAATCGCTTCACCATTAAAGATGGCGGCGACCATCTCACGCTGCTC
AATATCTGGAACCAATGGGTCGACTCCGACTTCAGCTATGTCTGGGCCAA
GGAAAACTTCCTCCAGCAGCGGAGTCTGACGAGAGCGCGCGATGTCCGCG
ACCAGCTCGCGAAGCTATGTGATCGCGTCGAGGTGTCCGTGAGCACGTGC
GGCTCCAACAATATGCAGCCGATTCAGAAGGCCATCACAGCCGGATTCTT
CCCGAACGCGGCACGACTGCAGCGAGGCGGCGACAGCTATCGCACAGTTA
AGAATGGACAGACGGTTTACCTCCACCCGTCGAGCACGCTGTTCGAAGTC
AACCCGCGGTGGGTGATTTACTTCGAGCTGGTGCTGACCAGCAAGGAGTA
TATGCGCAGCAACATGCCATTGCAGGCGGAGTGGCTGGTCGAGGTGGCGC
CACACTATTACAAGAAGAAGGATCTGGAGACGCTGGGGTTGGAGAAGAAG
ATGGCGAAGGGGCAGGGGGCGGCAGGCGAAAAGAGTCGGAATTGAATGGA
CCATCGAACTTTCGTGTCGGATTCGCTCCTCCGCCTTACGAACGCGTCGG
ATCCTACTGTCGTCGACTTCGTGCTTGCCACCGCCAGTTCCGCTAAGTCA
GCTTCCGCTTTGCAAGACAAGCTACTCCCTTTCCTGGACGGCAGCTCCGA
TGACATTAGCTCGTTTTGCGGCGAACTTTACAGACGGGTTGGGGTGAGGG
CCGGGTCCAGCGCTACCAGTGCCAATGTGGCAAGTAAAGAGCGCAGTGAT
GCCGTGTCATCAAAGAAGAAATATCGACTGCTAGAGATGGAGGAGGATGA
CGCGGAACGGGACAGACGGCGACGCAGAGATAAAGATCGGAGCAATGGAC
GCAGCAGTAAGGATGGCGAGAGCGGTCGCAGCCGCTGGGAAAAGGACGAG
AGCCGCAAACGCGATCGCAGTCGGGAAGAGGAATCGCGCGACCGGCCCCG
GACGAAGAAGGTACGGCGACGGAATGCCGATGACTTTGATGATCGCTGGG
GAGATGAGGAGATACCTGAAGATGAGCTATACGAGGATGATGAGCAGGCG
GGCGAATTTGAGGAGTCGCCTTCGAAACGGAGTCGGTTAGAGGATGGGTC
TGCGTCGCCACGGTCAAATGCCTCTGAGGAATTGGATCCGGAGACGAAGA
AGGAACAAGACCGGAAACGGGATCTCGAAGAACGAGATGAGTTTGCGAAA
CGCCTTGCTAAGAAGGATGATGGCAAAACGAAGAAGATCGTCGAGGATCG
GACAAGGTCTGGTGAGGCTGCGCGGCGACGAGCGTTGGCGGATGATGCGT
CTGCGCGGGCGGCTGTCATGCCAGACCTGAGGATGCGCTCTCGACAGGAA
TATTTGAAGAAGCGTGAGACGGAGCGGTTGGCCCTCTTGCGCAGACAGGT
CGCCGAGGAGACGGCAGAGCTGCGCGATAATCCCAGTTTGACTCGCAAGG
AGAAGGAGGAGTTCGCGCGCAATCGAGAAGTTCTGCGGATCGCGGAGGAG
CGGTTGCGGATTGACGACTATCGTGATGGTTACATGATGCCCGAGGACTA
CATTACGGAGAAGGGCAAGATCGATCGGAAGAAGAAGGAGGACGCGCTCT
ACAAACGTTATGTGGATCGTGATGACGCTGGTCAAGAGCGGTTCATTACG
GAGCACGAAGAATGGGAAATGGAGCAGACAGCCAAGGCTAAGGCACAGAT
CAATCGGGCTGAATTCGTTGACGAGGGCAATTATGAGTATGTGTTTGACG
ATTCGCAGAAGATCAACTTCGTTGTGGACGCCAAGATGGAAGGCACTCGG
AAGCCTATGACGCAGGAGCAGCGCAGGCTTCAGGAGCAGATTGATGCGGC
GGAGAAGAAAGCACAGTCGATGGAGGACACGCGAAAGAGCCTGCCCATCT
ATCAATTTCGAGACCAGATCATTCAGGCAGTGCACGACCACCAAGTCTTG
ATTATCGTGGGAGAGACTGGTTCGGGTAAGACGACGCAGATTCCGCAGTA
CCTTCACGAGGCTGGATTCACCAAGGGCGGCATGAAGGTTGGATGTACCC
AACCACGTCGAGTTGCTGCCATGAGTGTGGCTTCTCGAGTGGCGGAAGAA
ATGGGGGTGAAGCTGGGGAACGAGGTTGGCTACGCCATTCGATTCGAGGA
CAACACCAGCGACAAGACAGTGCTCAAGTACATGACGGATGGTATGTTGC
TGCGTGAGCTATTGACGGAGCCCGATCTCGGCCAGTACTCTGCATTGATG
ATTGATGAAGCCCACGAGCGAACGGTGCCCACGGACATCGCCTGTGGTCT
TCTGAAGGATATTGCGAAGGCACGGCCAGATCTCAAACTGCTGATCTCCT
CCGCCACGATGGATGCTCAGAAGTTCCAGCAGTATTTTGATGATGCTCCG
ATCTTCAACATCCCCGGTCGTCGGTACCCTGTCGATATTCATTACACATC
TCAGCCGGAAGCGAATTACCTGGCTGCAGCCATCACGACGGTCTTTCAAA
TCCATGTCACTCAGGGATCTGGAGATATCCTCGTCTTCTTGACAGGTCAA
GAAGAGATTGAGGCGGCGGAACAGAGTCTCCAGGAAACGTCACGAAAATT
AGGGAACAAGATACCCGAAATGATCATATGTCCAATCTACGCCAACCTCC
CGTCCGAGCTACAGACTAAGATCTTCGAGCCGACGCCGCCAAAGGCACGG
AAGGTCGTGTTGGCAACAAACATTGCTGAAACCAGTTTGACCATTGACGG
CATTGTCTACGTGATTGACCCAGGATTTGTCAAGGAGAATGTCTTCAACC
CGCGGACGGGTATGGAAAGTTTAGTCGTAACTCCCTGCTCGCGAGCTTCC
GCCAACCAAAGAGCCGGTCGTGCTGGACGTGTTGGTCCGGGCAAGTGTTT
CCGACTCTACACCAAGTGGGCATACTACAATGAGTTGGAGGAAAGCACGA
CTCCCGAGATCCAGCGGACCAATCTGAGCAGTGTCATCTTGATGCTGAAG
TCCCTGGGGATCGACCAGCTGCTGGACTTCGACTTCATGGACCCTCCTCC
GGCGGAGACCATCATTCGTGCGCTGGAGCAGCTGTATGCGTTGGGGGCTC
TGAACGATCGAGGCGAGCTGACAAAGATTGGGCGACAGATGGCCGAATTC
CCAACAGATCCCATGCTGGCCAAGGCGATTCTAGCAGCCGATAAATACGG
CTGTGTGGAAGAAGTGTTGTCTATCGTGTCGATGCTGGGCGAGGCGAGCG
CGCTCTTCTTCCGACCCAAGGACAAGAAGATTCACGCGGACAGCGCGCGG
AATCGCTTCACCATTAAAGATGGCGGCGACCATCTCACGCTGCTCAATAT
CTGGAACCAATGGGTCGACTCCGACTTCAGCTATGTCTGGGCCAAGGAAA
ACTTCCTCCAGCAGCGGAGTCTGACGAGAGCGCGCGATGTCCGCGACCAG
CTCGCGAAGCTATGTGATCGCGTCGAGGTGTCCGTGAGCACGTGCGGCTC
CAACAATATGCAGCCGATTCAGAAGGCCATCACAGCCGGATTCTTCCCGA
ACGCGGCACGACTGCAGCGAGGCGGCGACAGCTATCGCACAGTTAAGAAT
GGACAGACGGTTTACCTCCACCCGTCGAGCACGCTGTTCGAAGTCAACCC
GCGGTGGGTGATTTACTTCGAGCTGGTGCTGACCAGCAAGGAGTATATGC
GCAGCAACATGCCATTGCAGGCGGAGTGGCTGGTCGAGGTGGCGCCACAC
TATTACAAGAAGAAGGATCTGGAGACGCTGGGGTTGGAGAAGAAGATGGC
GAAGGGGCAGGGGGCGGCAGGCGAAAAGAGTCGGAATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
| GO:0004386 | helicase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR002464 |
| DBxref | InterPro:IPR011709 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR007502 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF07717 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF04408 |
| DBxref | PFAM:PF00270 |
| Product | Oligonucleotide/oligosaccharide-binding (OB)-fold family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:114910..118295 + |
|
