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CAN33_28610-T1, CAN33_28610-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_28610-T1
Unique NameCAN33_28610-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000008.1:250796..252121-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_28610-T1 ID=CAN33_28610-T1|Name=CAN33_28610-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1326bp|location=Sequence derived from alignment at NKJJ01000008.1:250796..252121- (Aspergillus niger FDAARGOS_311)
ATGGTTAAGTCAATTCTTGCATCCGTTTTCTTTGCGGCGACTGCGCTGGC
CGCGAGCCGCATGACGGCTCCTTCCGGTGCGATTGTCGTTGCCAAGTCCG
GAGGTGACTACGACACGGTGAGCATCTAGACTGTCGATCGTGTTGCAGAT
GTGTGGCTGATAGTGTCTTGTTGAACAGATCAGTGCTGCCGTTGATGCTC
TGAGCACCACTTCGACCGAGACCCAGACTATCTTCATTGAGGAGGGATCC
TACGACGAGCAGGTGTACATTCCCGCTCTCAGTGGAAAGCTGATCGTCTA
CGGTCAGACTGAGGAGTACGTTGTCAGTTGCGTATAGAAATTCAAGGATA
CTAATGAAGGTTTAGCACCACCACCTACACCAGCAACCTGGTCAACATCA
CCCACGCCATTGCCTTAGCCGATGTCGACAATGACGATGAGACTGGTCGG
TCCACACACTCTGGAAAATGTCCGTGAACTCGCTAACAATAAGTAGCAAC
CCTCCGTAACTACGCCGAGGGCTCGGCCATCTACAACCTAAACATTGCCA
ACACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCCGTGAGTGCCTATGCC
ACCGAGCAGGGATACTACGCCTGCCAGTTCACCGGATACCAGGGTAGGAC
CAATTTCAGATATGCCAACCGACAGTGATTAATCTCTACTATAGACACCC
TTCTGGCTGAGACCGGTTACCAGGTTTACGCCGGAACCTACATCGAGGGT
GCCGTGTATGTCCCTACCTTAATACCTTCGAAAGAAGTGAATCCAACTAA
CGTACAACCAGTGACTTTATTTTCGGACAGCACGCCCGCGCTTGGTTCCA
CGAGTGCGACATCCGCGTTCTCGAGGGCCCCAGCTCCGCCTCCATCACCG
CCAACGGCCGCTCCTCCGAGTCCGACGACTCCTACTACGTGATCCACAAG
TCCACCGTCGCTGCTGCTGATGGCAACGATGTTTCCTCGGGCACCTACTA
TCTTGGTATGCCACTGGTCTAGAACTGTCCACGGAGCCACTAGCCCACTA
ACGAATATTATCACAGGCCGCCCCTGGTCCCAGTACGCTCGCGTCTGCTT
CCAGAAGACCTCCATGACCGATGTGATCAACCACCTCGGCTGGACTGAGT
GGTCGACCTCCACCCCCAACACTGAGAATGTCACCTTTGTTGAATACGGC
AACACCGGTGCTGGTTCTAAGGGCCCCCGTGCTAACTTCTCTTCTGAGCT
CACCGAGCCCATCTCTATCTCTACCCTTCTGGGCTCTGACTGGGAGGACT
GGGTTGATACCAGCTACATCAACTAA
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Coding sequence (CDS) from alignment at NKJJ01000008.1:250796..252121-

>CAN33_28610-T1 ID=CAN33_28610-T1|Name=CAN33_28610-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6972bp|location=Sequence derived from alignment at NKJJ01000008.1:250796..252121- (Aspergillus niger FDAARGOS_311)
GCCGCCCCTGGTCCCAGTACGCTCGCGTCTGCTTCCAGAAGACCTCCATG
ACCGATGTGATCAACCACCTCGGCTGGACTGAGTGGTCGACCTCCACCCC
CAACACTGAGAATGTCACCTTTGTTGAATACGGCAACACCGGTGCTGGTT
CTAAGGGCCCCCGTGCTAACTTCTCTTCTGAGCTCACCGAGCCCATCTCT
ATCTCTACCCTTCTGGGCTCTGACTGGGAGGACTGGGTTGATACCAGCTA
CATCAACTAATGACTTTATTTTCGGACAGCACGCCCGCGCTTGGTTCCAC
GAGTGCGACATCCGCGTTCTCGAGGGCCCCAGCTCCGCCTCCATCACCGC
CAACGGCCGCTCCTCCGAGTCCGACGACTCCTACTACGTGATCCACAAGT
CCACCGTCGCTGCTGCTGATGGCAACGATGTTTCCTCGGGCACCTACTAT
CTTGACACCCTTCTGGCTGAGACCGGTTACCAGGTTTACGCCGGAACCTA
CATCGAGGGTGCCGTCAACCCTCCGTAACTACGCCGAGGGCTCGGCCATC
TACAACCTAAACATTGCCAACACCTGCGGTCAGGCCTGCCACCAGGCTCT
CGCCGTGAGTGCCTATGCCACCGAGCAGGGATACTACGCCTGCCAGTTCA
CCGGATACCAGGCACCACCACCTACACCAGCAACCTGGTCAACATCACCC
ACGCCATTGCCTTAGCCGATGTCGACAATGACGATGAGACTGATCAGTGC
TGCCGTTGATGCTCTGAGCACCACTTCGACCGAGACCCAGACTATCTTCA
TTGAGGAGGGATCCTACGACGAGCAGGTGTACATTCCCGCTCTCAGTGGA
AAGCTGATCGTCTACGGTCAGACTGAGGAATGGTTAAGTCAATTCTTGCA
TCCGTTTTCTTTGCGGCGACTGCGCTGGCCGCGAGCCGCATGACGGCTCC
TTCCGGTGCGATTGTCGTTGCCAAGTCCGGAGGTGACTACGACACGGCCG
CCCCTGGTCCCAGTACGCTCGCGTCTGCTTCCAGAAGACCTCCATGACCG
ATGTGATCAACCACCTCGGCTGGACTGAGTGGTCGACCTCCACCCCCAAC
ACTGAGAATGTCACCTTTGTTGAATACGGCAACACCGGTGCTGGTTCTAA
GGGCCCCCGTGCTAACTTCTCTTCTGAGCTCACCGAGCCCATCTCTATCT
CTACCCTTCTGGGCTCTGACTGGGAGGACTGGGTTGATACCAGCTACATC
AACTAATGACTTTATTTTCGGACAGCACGCCCGCGCTTGGTTCCACGAGT
GCGACATCCGCGTTCTCGAGGGCCCCAGCTCCGCCTCCATCACCGCCAAC
GGCCGCTCCTCCGAGTCCGACGACTCCTACTACGTGATCCACAAGTCCAC
CGTCGCTGCTGCTGATGGCAACGATGTTTCCTCGGGCACCTACTATCTTG
ACACCCTTCTGGCTGAGACCGGTTACCAGGTTTACGCCGGAACCTACATC
GAGGGTGCCGTCAACCCTCCGTAACTACGCCGAGGGCTCGGCCATCTACA
ACCTAAACATTGCCAACACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCC
GTGAGTGCCTATGCCACCGAGCAGGGATACTACGCCTGCCAGTTCACCGG
ATACCAGGCACCACCACCTACACCAGCAACCTGGTCAACATCACCCACGC
CATTGCCTTAGCCGATGTCGACAATGACGATGAGACTGATCAGTGCTGCC
GTTGATGCTCTGAGCACCACTTCGACCGAGACCCAGACTATCTTCATTGA
GGAGGGATCCTACGACGAGCAGGTGTACATTCCCGCTCTCAGTGGAAAGC
TGATCGTCTACGGTCAGACTGAGGAATGGTTAAGTCAATTCTTGCATCCG
TTTTCTTTGCGGCGACTGCGCTGGCCGCGAGCCGCATGACGGCTCCTTCC
GGTGCGATTGTCGTTGCCAAGTCCGGAGGTGACTACGACACGGCCGCCCC
TGGTCCCAGTACGCTCGCGTCTGCTTCCAGAAGACCTCCATGACCGATGT
GATCAACCACCTCGGCTGGACTGAGTGGTCGACCTCCACCCCCAACACTG
AGAATGTCACCTTTGTTGAATACGGCAACACCGGTGCTGGTTCTAAGGGC
CCCCGTGCTAACTTCTCTTCTGAGCTCACCGAGCCCATCTCTATCTCTAC
CCTTCTGGGCTCTGACTGGGAGGACTGGGTTGATACCAGCTACATCAACT
AATGACTTTATTTTCGGACAGCACGCCCGCGCTTGGTTCCACGAGTGCGA
CATCCGCGTTCTCGAGGGCCCCAGCTCCGCCTCCATCACCGCCAACGGCC
GCTCCTCCGAGTCCGACGACTCCTACTACGTGATCCACAAGTCCACCGTC
GCTGCTGCTGATGGCAACGATGTTTCCTCGGGCACCTACTATCTTGACAC
CCTTCTGGCTGAGACCGGTTACCAGGTTTACGCCGGAACCTACATCGAGG
GTGCCGTCAACCCTCCGTAACTACGCCGAGGGCTCGGCCATCTACAACCT
AAACATTGCCAACACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCCGTGA
GTGCCTATGCCACCGAGCAGGGATACTACGCCTGCCAGTTCACCGGATAC
CAGGCACCACCACCTACACCAGCAACCTGGTCAACATCACCCACGCCATT
GCCTTAGCCGATGTCGACAATGACGATGAGACTGATCAGTGCTGCCGTTG
ATGCTCTGAGCACCACTTCGACCGAGACCCAGACTATCTTCATTGAGGAG
GGATCCTACGACGAGCAGGTGTACATTCCCGCTCTCAGTGGAAAGCTGAT
CGTCTACGGTCAGACTGAGGAATGGTTAAGTCAATTCTTGCATCCGTTTT
CTTTGCGGCGACTGCGCTGGCCGCGAGCCGCATGACGGCTCCTTCCGGTG
CGATTGTCGTTGCCAAGTCCGGAGGTGACTACGACACGGCCGCCCCTGGT
CCCAGTACGCTCGCGTCTGCTTCCAGAAGACCTCCATGACCGATGTGATC
AACCACCTCGGCTGGACTGAGTGGTCGACCTCCACCCCCAACACTGAGAA
TGTCACCTTTGTTGAATACGGCAACACCGGTGCTGGTTCTAAGGGCCCCC
GTGCTAACTTCTCTTCTGAGCTCACCGAGCCCATCTCTATCTCTACCCTT
CTGGGCTCTGACTGGGAGGACTGGGTTGATACCAGCTACATCAACTAATG
ACTTTATTTTCGGACAGCACGCCCGCGCTTGGTTCCACGAGTGCGACATC
CGCGTTCTCGAGGGCCCCAGCTCCGCCTCCATCACCGCCAACGGCCGCTC
CTCCGAGTCCGACGACTCCTACTACGTGATCCACAAGTCCACCGTCGCTG
CTGCTGATGGCAACGATGTTTCCTCGGGCACCTACTATCTTGACACCCTT
CTGGCTGAGACCGGTTACCAGGTTTACGCCGGAACCTACATCGAGGGTGC
CGTCAACCCTCCGTAACTACGCCGAGGGCTCGGCCATCTACAACCTAAAC
ATTGCCAACACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCCGTGAGTGC
CTATGCCACCGAGCAGGGATACTACGCCTGCCAGTTCACCGGATACCAGG
CACCACCACCTACACCAGCAACCTGGTCAACATCACCCACGCCATTGCCT
TAGCCGATGTCGACAATGACGATGAGACTGATCAGTGCTGCCGTTGATGC
TCTGAGCACCACTTCGACCGAGACCCAGACTATCTTCATTGAGGAGGGAT
CCTACGACGAGCAGGTGTACATTCCCGCTCTCAGTGGAAAGCTGATCGTC
TACGGTCAGACTGAGGAATGGTTAAGTCAATTCTTGCATCCGTTTTCTTT
GCGGCGACTGCGCTGGCCGCGAGCCGCATGACGGCTCCTTCCGGTGCGAT
TGTCGTTGCCAAGTCCGGAGGTGACTACGACACGGCCGCCCCTGGTCCCA
GTACGCTCGCGTCTGCTTCCAGAAGACCTCCATGACCGATGTGATCAACC
ACCTCGGCTGGACTGAGTGGTCGACCTCCACCCCCAACACTGAGAATGTC
ACCTTTGTTGAATACGGCAACACCGGTGCTGGTTCTAAGGGCCCCCGTGC
TAACTTCTCTTCTGAGCTCACCGAGCCCATCTCTATCTCTACCCTTCTGG
GCTCTGACTGGGAGGACTGGGTTGATACCAGCTACATCAACTAATGACTT
TATTTTCGGACAGCACGCCCGCGCTTGGTTCCACGAGTGCGACATCCGCG
TTCTCGAGGGCCCCAGCTCCGCCTCCATCACCGCCAACGGCCGCTCCTCC
GAGTCCGACGACTCCTACTACGTGATCCACAAGTCCACCGTCGCTGCTGC
TGATGGCAACGATGTTTCCTCGGGCACCTACTATCTTGACACCCTTCTGG
CTGAGACCGGTTACCAGGTTTACGCCGGAACCTACATCGAGGGTGCCGTC
AACCCTCCGTAACTACGCCGAGGGCTCGGCCATCTACAACCTAAACATTG
CCAACACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCCGTGAGTGCCTAT
GCCACCGAGCAGGGATACTACGCCTGCCAGTTCACCGGATACCAGGCACC
ACCACCTACACCAGCAACCTGGTCAACATCACCCACGCCATTGCCTTAGC
CGATGTCGACAATGACGATGAGACTGATCAGTGCTGCCGTTGATGCTCTG
AGCACCACTTCGACCGAGACCCAGACTATCTTCATTGAGGAGGGATCCTA
CGACGAGCAGGTGTACATTCCCGCTCTCAGTGGAAAGCTGATCGTCTACG
GTCAGACTGAGGAATGGTTAAGTCAATTCTTGCATCCGTTTTCTTTGCGG
CGACTGCGCTGGCCGCGAGCCGCATGACGGCTCCTTCCGGTGCGATTGTC
GTTGCCAAGTCCGGAGGTGACTACGACACGGCCGCCCCTGGTCCCAGTAC
GCTCGCGTCTGCTTCCAGAAGACCTCCATGACCGATGTGATCAACCACCT
CGGCTGGACTGAGTGGTCGACCTCCACCCCCAACACTGAGAATGTCACCT
TTGTTGAATACGGCAACACCGGTGCTGGTTCTAAGGGCCCCCGTGCTAAC
TTCTCTTCTGAGCTCACCGAGCCCATCTCTATCTCTACCCTTCTGGGCTC
TGACTGGGAGGACTGGGTTGATACCAGCTACATCAACTAATGACTTTATT
TTCGGACAGCACGCCCGCGCTTGGTTCCACGAGTGCGACATCCGCGTTCT
CGAGGGCCCCAGCTCCGCCTCCATCACCGCCAACGGCCGCTCCTCCGAGT
CCGACGACTCCTACTACGTGATCCACAAGTCCACCGTCGCTGCTGCTGAT
GGCAACGATGTTTCCTCGGGCACCTACTATCTTGACACCCTTCTGGCTGA
GACCGGTTACCAGGTTTACGCCGGAACCTACATCGAGGGTGCCGTCAACC
CTCCGTAACTACGCCGAGGGCTCGGCCATCTACAACCTAAACATTGCCAA
CACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCCGTGAGTGCCTATGCCA
CCGAGCAGGGATACTACGCCTGCCAGTTCACCGGATACCAGGCACCACCA
CCTACACCAGCAACCTGGTCAACATCACCCACGCCATTGCCTTAGCCGAT
GTCGACAATGACGATGAGACTGATCAGTGCTGCCGTTGATGCTCTGAGCA
CCACTTCGACCGAGACCCAGACTATCTTCATTGAGGAGGGATCCTACGAC
GAGCAGGTGTACATTCCCGCTCTCAGTGGAAAGCTGATCGTCTACGGTCA
GACTGAGGAATGGTTAAGTCAATTCTTGCATCCGTTTTCTTTGCGGCGAC
TGCGCTGGCCGCGAGCCGCATGACGGCTCCTTCCGGTGCGATTGTCGTTG
CCAAGTCCGGAGGTGACTACGACACGGCCGCCCCTGGTCCCAGTACGCTC
GCGTCTGCTTCCAGAAGACCTCCATGACCGATGTGATCAACCACCTCGGC
TGGACTGAGTGGTCGACCTCCACCCCCAACACTGAGAATGTCACCTTTGT
TGAATACGGCAACACCGGTGCTGGTTCTAAGGGCCCCCGTGCTAACTTCT
CTTCTGAGCTCACCGAGCCCATCTCTATCTCTACCCTTCTGGGCTCTGAC
TGGGAGGACTGGGTTGATACCAGCTACATCAACTAATGACTTTATTTTCG
GACAGCACGCCCGCGCTTGGTTCCACGAGTGCGACATCCGCGTTCTCGAG
GGCCCCAGCTCCGCCTCCATCACCGCCAACGGCCGCTCCTCCGAGTCCGA
CGACTCCTACTACGTGATCCACAAGTCCACCGTCGCTGCTGCTGATGGCA
ACGATGTTTCCTCGGGCACCTACTATCTTGACACCCTTCTGGCTGAGACC
GGTTACCAGGTTTACGCCGGAACCTACATCGAGGGTGCCGTCAACCCTCC
GTAACTACGCCGAGGGCTCGGCCATCTACAACCTAAACATTGCCAACACC
TGCGGTCAGGCCTGCCACCAGGCTCTCGCCGTGAGTGCCTATGCCACCGA
GCAGGGATACTACGCCTGCCAGTTCACCGGATACCAGGCACCACCACCTA
CACCAGCAACCTGGTCAACATCACCCACGCCATTGCCTTAGCCGATGTCG
ACAATGACGATGAGACTGATCAGTGCTGCCGTTGATGCTCTGAGCACCAC
TTCGACCGAGACCCAGACTATCTTCATTGAGGAGGGATCCTACGACGAGC
AGGTGTACATTCCCGCTCTCAGTGGAAAGCTGATCGTCTACGGTCAGACT
GAGGAATGGTTAAGTCAATTCTTGCATCCGTTTTCTTTGCGGCGACTGCG
CTGGCCGCGAGCCGCATGACGGCTCCTTCCGGTGCGATTGTCGTTGCCAA
GTCCGGAGGTGACTACGACACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042545cell wall modification
Vocabulary: Molecular Function
TermDefinition
GO:0030599pectinesterase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PME1CAN33_28610Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28610-T1CAN33_28610-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28610-T1.cdsCAN33_28610-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_28610-T1.exon7CAN33_28610-T1.exon7Aspergillus niger FDAARGOS_311exon
CAN33_28610-T1.exon6CAN33_28610-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_28610-T1.exon5CAN33_28610-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_28610-T1.exon4CAN33_28610-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_28610-T1.exon3CAN33_28610-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_28610-T1.exon2CAN33_28610-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_28610-T1.exon1CAN33_28610-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000081.1
NoteSECRETED:SignalP(1-17)
NoteCAZy:CE8
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR033131
DBxrefInterPro:IPR018040
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000070
DBxrefPFAM:PF01095
ProductPectinesterase 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000008.1supercontigNKJJ01000008.1:250796..252121 -
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