|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000008.1:510182..513130+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_29010-T1 ID=CAN33_29010-T1|Name=CAN33_29010-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2949bp|location=Sequence derived from alignment at NKJJ01000008.1:510182..513130+ (Aspergillus niger FDAARGOS_311)
ATGGGGAGCGACTTTCAGCTATTCTCTCCCCTCCAGTCGTCGGATAGAAG
AGACTCACAGGCCGAGTCTACGACCTTCGCTCAGTCTACAACGGAAGATT
CCAGTCAGGATTGGACGCAGTGGATGAGATGGGATGACAAGGGCTTTGCG
GATGGGGCAAAAGACGTCTCTCACTCCCCCTTCGATACTACCTTCACCTC
GCCCAATGCGTCAATTGGCAACACAGATCTCTTTCAAAAGTCCGACTTCT
CACCCGACATCAACCTGGATTGTACCAATATTCCCTTTGATTCCTTGCTC
GATCAAAATTACAGTGGCGTGTGCCAATCGAAGATCGGATCCATTGGTAC
CGATCTCCAGTCGGCACTCTCCGCTACGTCCGGCTCTCCGTTATCCTCGG
AAGGAACTGCTCGCAAACGCAAGTCGGGCAGTGATGATGATGGCTCAACC
GTCAGTGGAGTCATGCCGACCGGTAAGAAGATGCCGGCCAAAAAGCGAGC
ACACAACGTCATCGAGAAGAGGTATCGAGCCAACCTTAATGAGAAGATTG
CCGAGCTGAGGGACAGTGTGCCCAGTCTCCGAGCGTCAAAAAATGCGTCG
GGTAATCTCCTGGAAGATGACGATGGAGAAGGGGTCACTCCCGCCAACAA
GTTGAACAAGGCCTCTATTCTCTCAAAAGCCACAGAGTATATTCGTCACC
TTGAGATCCGTAATAAGCGACTTGAGGATGAGAACATGGCATTGAAGAAC
CGACTTCGTCAAGCGGAAAAGGCCGTTGACCAGTCACTGACCTCCGCAGC
GTCCGTTTCCTCACCCAGCAACTACACCGTTTCCACAGAATCTGGCGCAA
GCTCATCCCCCAGTGTGTTCTCACATGTGGAGGATAGTCCTAGCGACCAC
TCGCCGACGTCTTTGTATCCTCCCGAAGGTCTGCTGAAGGTGCCCGATGC
CTTCAAACGCATGCGAGAGGAATCCACCGCTAAAGATAACGCGTTCTCTC
AATCATACATCCAATACCCCAGCAGCAATAACAGTGTCTCATCCCCATGC
GGTGGTCGTACCAGGCGATCATATTACCCCAACAAGTACATGCTTGGTGC
CCTTGCTGGCTTAATGATCGTCGAGGGTATGGGCAGCGAAAAGAACACGG
AATCAACCGCCAAGGGGCTGCTGGCAATGCCATTCAACCTGTTCGGAAAC
TTGCAAACCAGCCTCCAAAGTCCCACAGCAGCATACTGGTTTGCAATGGC
ACGAAACTTTTGGTATTCGTGGCATGCACGAGCCATCTCGCATTTTCTTA
TTCTCGCTACCCTTGTCGTCGGTAGTGCATTCGTGGTCTTCGTTTATTTG
TTCAACGCTACCCCCGGCGAACAGTCCTCTTCATTGAAGACTTCGTCACC
ATCGGATACATCGTCAAATTTCCGGCGCCAGGCCTGGCTGACGAGCATAC
AGCGAGTCGGTGTTCCACGTCACCGCTTTTTCCACGAGTGGTACGTAGTG
ACCTCGCGCTGCTTCGAGTATGTCCTGCGGTGTCTCCTGGGCTGGAAACT
GTACTCTTCTCTTACAGGAGTTACCGAGGAGGACGAGAAGGGGCGAGTCA
AGACCTGGGATATTGCAATCGACGCACAATTGGCTGGTGGTGATGCCGAA
ATTAGTAAGAGTCGTCTAGTCCTGACTATCTTTGCGGCAGGCACCCTGCC
TCGGAGTCCTATGAGGATGATGCTCAAAGCCCTCCACTGCCGCATTCTGC
TCTGGAGAGTTGGGGACCGCGGCTCTTGGAGCTTCGACTTGTCGAATGAT
GTCGCTCGTTCACTGGCAAGGTATCAATGGGACCTCGCCCGGAAAATGCA
CAAGGCTATGCCGAAAGACCATCCTGATGCCCTGCCTAGTCATCTGGCTG
CGTTGTTACAACTGGACTGCGACGAGGTCATGATTGACAGCATCGTGCAA
AGAGCGGCAAACCTCACTTGGAATCGTCCCACTCAAGAAGGTACCGATGA
TGATCAAGCTCTCCTGGATGTGGTGGAAGAGGACCCTGCCATTCAATCTT
CCCTGGATGCCCTTGCGGCTTGGTGGTCTAGCCATCTTTTGCAACGGGCG
CTGCTGAGATATTTCGAAGCTAGCTCCGGTGGGCCTGACGCAAAGAAGAG
TCGCGATCTATTCAAGGCTAAGATTAAATTGGCCCTGGACGTCGCTCCCC
AGCCTTCAGCCGCTCATACTCGAGCTTTGGTGATGAAGGCAGTATTCTTC
GAGCAAGACCGCGCTGCGAATATCGGATCCGTCCTTGCGGCATTGCCGAA
AGACAAAGGGAAGAGCAAACAAAACCAAGCATCCAACTTCCTTGACTCGT
CTCTTCCCGTGTCTGTGCGGGAAGAGATCGCGATATCAGTTCGCTGTGCA
ATGATTGCGGCCATTTTTACCGCTAGGACTACAGGCGACACCTCTCTACC
GGCGTCCTTTACCATCCAAAGAGCTGTTACGTGGTTCAATCAGTTGCCGC
TTGACCCGGTGGATCTGACGCTTCTTGGGTTTGCGTCTGTGTACCATTTG
CTCCATGTCTTAGCTTCTGACACCGACTATCTGTCGTCTTCCGAGTCCTC
ATCGCCATCTTCGCCTGTATCGCGCAGCTCCACCCCGTCGTCTTCGGTTT
CCTCTGACGAAGAGGGGAATGACAAGCCACGCCTGTCGCAGAAGCCCGAG
ATTTTGCCGCAATCCATTCCGAATTTGGGTCGTGTAGCATCCGAACTCAT
GTACTGGGCGCGGAATGCATACAATCCTGCTTTCTACGGTTTCACTTCTC
AACTTGTCAAGGTCATCGAAACCGAATGCACCTCGCTATGCCATAGTGCC
GGGGTCGACGTGGCCGACTACTCTTGTATCCAGGAGGAGAAGATCAAGTC
GAAACAATTAAAAGACAAAAAGAAGAAAAAGTACCCGAGAAGGTCGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000008.1:510182..513130+ >CAN33_29010-T1 ID=CAN33_29010-T1|Name=CAN33_29010-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2949bp|location=Sequence derived from alignment at NKJJ01000008.1:510182..513130+ (Aspergillus niger FDAARGOS_311)
ATGGGGAGCGACTTTCAGCTATTCTCTCCCCTCCAGTCGTCGGATAGAAG
AGACTCACAGGCCGAGTCTACGACCTTCGCTCAGTCTACAACGGAAGATT
CCAGTCAGGATTGGACGCAGTGGATGAGATGGGATGACAAGGGCTTTGCG
GATGGGGCAAAAGACGTCTCTCACTCCCCCTTCGATACTACCTTCACCTC
GCCCAATGCGTCAATTGGCAACACAGATCTCTTTCAAAAGTCCGACTTCT
CACCCGACATCAACCTGGATTGTACCAATATTCCCTTTGATTCCTTGCTC
GATCAAAATTACAGTGGCGTGTGCCAATCGAAGATCGGATCCATTGGTAC
CGATCTCCAGTCGGCACTCTCCGCTACGTCCGGCTCTCCGTTATCCTCGG
AAGGAACTGCTCGCAAACGCAAGTCGGGCAGTGATGATGATGGCTCAACC
GTCAGTGGAGTCATGCCGACCGGTAAGAAGATGCCGGCCAAAAAGCGAGC
ACACAACGTCATCGAGAAGAGGTATCGAGCCAACCTTAATGAGAAGATTG
CCGAGCTGAGGGACAGTGTGCCCAGTCTCCGAGCGTCAAAAAATGCGTCG
GGTAATCTCCTGGAAGATGACGATGGAGAAGGGGTCACTCCCGCCAACAA
GTTGAACAAGGCCTCTATTCTCTCAAAAGCCACAGAGTATATTCGTCACC
TTGAGATCCGTAATAAGCGACTTGAGGATGAGAACATGGCATTGAAGAAC
CGACTTCGTCAAGCGGAAAAGGCCGTTGACCAGTCACTGACCTCCGCAGC
GTCCGTTTCCTCACCCAGCAACTACACCGTTTCCACAGAATCTGGCGCAA
GCTCATCCCCCAGTGTGTTCTCACATGTGGAGGATAGTCCTAGCGACCAC
TCGCCGACGTCTTTGTATCCTCCCGAAGGTCTGCTGAAGGTGCCCGATGC
CTTCAAACGCATGCGAGAGGAATCCACCGCTAAAGATAACGCGTTCTCTC
AATCATACATCCAATACCCCAGCAGCAATAACAGTGTCTCATCCCCATGC
GGTGGTCGTACCAGGCGATCATATTACCCCAACAAGTACATGCTTGGTGC
CCTTGCTGGCTTAATGATCGTCGAGGGTATGGGCAGCGAAAAGAACACGG
AATCAACCGCCAAGGGGCTGCTGGCAATGCCATTCAACCTGTTCGGAAAC
TTGCAAACCAGCCTCCAAAGTCCCACAGCAGCATACTGGTTTGCAATGGC
ACGAAACTTTTGGTATTCGTGGCATGCACGAGCCATCTCGCATTTTCTTA
TTCTCGCTACCCTTGTCGTCGGTAGTGCATTCGTGGTCTTCGTTTATTTG
TTCAACGCTACCCCCGGCGAACAGTCCTCTTCATTGAAGACTTCGTCACC
ATCGGATACATCGTCAAATTTCCGGCGCCAGGCCTGGCTGACGAGCATAC
AGCGAGTCGGTGTTCCACGTCACCGCTTTTTCCACGAGTGGTACGTAGTG
ACCTCGCGCTGCTTCGAGTATGTCCTGCGGTGTCTCCTGGGCTGGAAACT
GTACTCTTCTCTTACAGGAGTTACCGAGGAGGACGAGAAGGGGCGAGTCA
AGACCTGGGATATTGCAATCGACGCACAATTGGCTGGTGGTGATGCCGAA
ATTAGTAAGAGTCGTCTAGTCCTGACTATCTTTGCGGCAGGCACCCTGCC
TCGGAGTCCTATGAGGATGATGCTCAAAGCCCTCCACTGCCGCATTCTGC
TCTGGAGAGTTGGGGACCGCGGCTCTTGGAGCTTCGACTTGTCGAATGAT
GTCGCTCGTTCACTGGCAAGGTATCAATGGGACCTCGCCCGGAAAATGCA
CAAGGCTATGCCGAAAGACCATCCTGATGCCCTGCCTAGTCATCTGGCTG
CGTTGTTACAACTGGACTGCGACGAGGTCATGATTGACAGCATCGTGCAA
AGAGCGGCAAACCTCACTTGGAATCGTCCCACTCAAGAAGGTACCGATGA
TGATCAAGCTCTCCTGGATGTGGTGGAAGAGGACCCTGCCATTCAATCTT
CCCTGGATGCCCTTGCGGCTTGGTGGTCTAGCCATCTTTTGCAACGGGCG
CTGCTGAGATATTTCGAAGCTAGCTCCGGTGGGCCTGACGCAAAGAAGAG
TCGCGATCTATTCAAGGCTAAGATTAAATTGGCCCTGGACGTCGCTCCCC
AGCCTTCAGCCGCTCATACTCGAGCTTTGGTGATGAAGGCAGTATTCTTC
GAGCAAGACCGCGCTGCGAATATCGGATCCGTCCTTGCGGCATTGCCGAA
AGACAAAGGGAAGAGCAAACAAAACCAAGCATCCAACTTCCTTGACTCGT
CTCTTCCCGTGTCTGTGCGGGAAGAGATCGCGATATCAGTTCGCTGTGCA
ATGATTGCGGCCATTTTTACCGCTAGGACTACAGGCGACACCTCTCTACC
GGCGTCCTTTACCATCCAAAGAGCTGTTACGTGGTTCAATCAGTTGCCGC
TTGACCCGGTGGATCTGACGCTTCTTGGGTTTGCGTCTGTGTACCATTTG
CTCCATGTCTTAGCTTCTGACACCGACTATCTGTCGTCTTCCGAGTCCTC
ATCGCCATCTTCGCCTGTATCGCGCAGCTCCACCCCGTCGTCTTCGGTTT
CCTCTGACGAAGAGGGGAATGACAAGCCACGCCTGTCGCAGAAGCCCGAG
ATTTTGCCGCAATCCATTCCGAATTTGGGTCGTGTAGCATCCGAACTCAT
GTACTGGGCGCGGAATGCATACAATCCTGCTTTCTACGGTTTCACTTCTC
AACTTGTCAAGGTCATCGAAACCGAATGCACCTCGCTATGCCATAGTGCC
GGGGTCGACGTGGCCGACTACTCTTGTATCCAGGAGGAGAAGATCAAGTC
GAAACAATTAAAAGACAAAAAGAAGAAAAAGTACCCGAGAAGGTCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0032933 | SREBP signaling pathway |
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046983 | protein dimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000081.5 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR019006 |
| DBxref | InterPro:IPR036638 |
| DBxref | InterPro:IPR011598 |
| DBxref | PFAM:PF00010 |
| DBxref | PFAM:PF09427 |
| Product | protein of unknown function (DUF2014) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000008.1 | supercontig | NKJJ01000008.1:510182..513130 + |
|
