You are here

Home

CAN33_10725-T1, CAN33_10725-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_10725-T1
Unique NameCAN33_10725-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:220232..221330+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_10725-T1 ID=CAN33_10725-T1|Name=CAN33_10725-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1099bp|location=Sequence derived from alignment at NKJJ01000009.1:220232..221330+ (Aspergillus niger FDAARGOS_311)
ATGCGTTTGGGAAGCATTTCGCTGCTCGCTCTGGGAGCGACGACGGCGAG
CGCAATCCGCGACACCTCTCCCTTTTTCCTTGCATCGACCTCCCAGTATG
CGTGACACTTGCTCGATTGCGGGACGCCCGTAGAATGTCCAGCTAATCAG
TATCTATAGGATCCCTTCTACGTCGGCACAGCTTCGGACTGCTCCCGCTA
TTCTAGAAGATCTTTCCACGGGGCTGAGCGGCTGCCCTTCCGACTACTAT
GTCATTGCTTCCCAGCCCGGTGTGCACAGCACCGACTTCGCTACCCGCCA
GTCCGCACCGCGCCTCGGTGCGAAGATGACAGGAAAGGACAAGAACATCC
GGGCAAAGATGATTGTGAATGAAGTAGTGGGCGAGATAGAGGCGAAGGAT
GTCCAGAAGCTGCTCGAGAAGGAGTGCGGGGCTGAATCGACCGTGATCGA
CGCTTCCTGTAGGTGCTCCTTTGTGTATGAATGGTCGACAGATGAAGGGC
GTGACTGACGGCAAATAATTAGCTGATTCTTACTCTGCCGATTTTGCTGC
GGAGTCCCGTATCATCGTTGTTGACTTGCCCGTCCTGACTGTGGGATCTG
AGCGGAAGAAGCAGCTTTCGAACAACGGTAGGTGCTCCAAACATCTAGAC
TACTTGCCAGAGAGATGCTTATTGTCTTTGCAGATGGCTTGCTCTTCAAT
GTCATTGATCAACTCCCGGAATCCAAGGGCTACACGATCCTCTACGTCAC
GTCCCCGAGGGAACTTGAAGACACCGGTTCCGATTTCTACCAAGCGGAGC
AGGATCCCCTCCACATGGACCTCAAGCGCGACTACTCCGCTCATGACAGT
CAAACCCCTTCGTCCAACAAGACGCTTTTCCAGGAATACCAATTCTTCAC
CCCAGGTATGTGGAGCCGAAAATTGAGTTACTGTAGGACAATAACCTGAC
CGTTTACAGGCATTTGGATGGGAATTCTTGCAACCTTGGTTTTCCTGATG
ATTTTCTATGTTGGACTGGCTGCTCTTCTGAGCTTGGAGGTTCCCTATGC
AGCATTCGAGAAGGACACATCGGCCGCCGTGCAGAAGAAGCAGCAGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000009.1:220232..221330+

>CAN33_10725-T1 ID=CAN33_10725-T1|Name=CAN33_10725-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4305bp|location=Sequence derived from alignment at NKJJ01000009.1:220232..221330+ (Aspergillus niger FDAARGOS_311)
ATGCGTTTGGGAAGCATTTCGCTGCTCGCTCTGGGAGCGACGACGGCGAG
CGCAATCCGCGACACCTCTCCCTTTTTCCTTGCATCGACCTCCCAGATCC
CTTCTACGTCGGCACAGCTTCGGACTGCTCCCGCTATTCTAGAAGATCTT
TCCACGGGGCTGAGCGGCTGCCCTTCCGACTACTATGTCATTGCTTCCCA
GCCCGGTGTGCACAGCACCGACTTCGCTACCCGCCAGTCCGCACCGCGCC
TCGGTGCGAAGATGACAGGAAAGGACAAGAACATCCGGGCAAAGATGATT
GTGAATGAAGTAGTGGGCGAGATAGAGGCGAAGGATGTCCAGAAGCTGCT
CGAGAAGGAGTGCGGGGCTGAATCGACCGTGATCGACGCTTCCTCTGATT
CTTACTCTGCCGATTTTGCTGCGGAGTCCCGTATCATCGTTGTTGACTTG
CCCGTCCTGACTGTGGGATCTGAGCGGAAGAAGCAGCTTTCGAACAACGA
TGGCTTGCTCTTCAATGTCATTGATCAACTCCCGGAATCCAAGGGCTACA
CGATCCTCTACGTCACGTCCCCGAGGGAACTTGAAGACACCGGTTCCGAT
TTCTACCAAGCGGAGCAGGATCCCCTCCACATGGACCTCAAGCGCGACTA
CTCCGCTCATGACAGTCAAACCCCTTCGTCCAACAAGACGCTTTTCCAGG
AATACCAATTCTTCACCCCAGGCATTTGGATGGGAATTCTTGCAACCTTG
GTTTTCCTGATGATTTTCTATGTTGGACTGGCTGCTCTTCTGAGCTTGGA
GGTTCCCTATGCAGCATTCGAGAAGGACACATCGGCCGCCGTGCAGAAGA
AGCAGCAGTGAATGCGTTTGGGAAGCATTTCGCTGCTCGCTCTGGGAGCG
ACGACGGCGAGCGCAATCCGCGACACCTCTCCCTTTTTCCTTGCATCGAC
CTCCCAGATCCCTTCTACGTCGGCACAGCTTCGGACTGCTCCCGCTATTC
TAGAAGATCTTTCCACGGGGCTGAGCGGCTGCCCTTCCGACTACTATGTC
ATTGCTTCCCAGCCCGGTGTGCACAGCACCGACTTCGCTACCCGCCAGTC
CGCACCGCGCCTCGGTGCGAAGATGACAGGAAAGGACAAGAACATCCGGG
CAAAGATGATTGTGAATGAAGTAGTGGGCGAGATAGAGGCGAAGGATGTC
CAGAAGCTGCTCGAGAAGGAGTGCGGGGCTGAATCGACCGTGATCGACGC
TTCCTCTGATTCTTACTCTGCCGATTTTGCTGCGGAGTCCCGTATCATCG
TTGTTGACTTGCCCGTCCTGACTGTGGGATCTGAGCGGAAGAAGCAGCTT
TCGAACAACGATGGCTTGCTCTTCAATGTCATTGATCAACTCCCGGAATC
CAAGGGCTACACGATCCTCTACGTCACGTCCCCGAGGGAACTTGAAGACA
CCGGTTCCGATTTCTACCAAGCGGAGCAGGATCCCCTCCACATGGACCTC
AAGCGCGACTACTCCGCTCATGACAGTCAAACCCCTTCGTCCAACAAGAC
GCTTTTCCAGGAATACCAATTCTTCACCCCAGGCATTTGGATGGGAATTC
TTGCAACCTTGGTTTTCCTGATGATTTTCTATGTTGGACTGGCTGCTCTT
CTGAGCTTGGAGGTTCCCTATGCAGCATTCGAGAAGGACACATCGGCCGC
CGTGCAGAAGAAGCAGCAGTGAATGCGTTTGGGAAGCATTTCGCTGCTCG
CTCTGGGAGCGACGACGGCGAGCGCAATCCGCGACACCTCTCCCTTTTTC
CTTGCATCGACCTCCCAGATCCCTTCTACGTCGGCACAGCTTCGGACTGC
TCCCGCTATTCTAGAAGATCTTTCCACGGGGCTGAGCGGCTGCCCTTCCG
ACTACTATGTCATTGCTTCCCAGCCCGGTGTGCACAGCACCGACTTCGCT
ACCCGCCAGTCCGCACCGCGCCTCGGTGCGAAGATGACAGGAAAGGACAA
GAACATCCGGGCAAAGATGATTGTGAATGAAGTAGTGGGCGAGATAGAGG
CGAAGGATGTCCAGAAGCTGCTCGAGAAGGAGTGCGGGGCTGAATCGACC
GTGATCGACGCTTCCTCTGATTCTTACTCTGCCGATTTTGCTGCGGAGTC
CCGTATCATCGTTGTTGACTTGCCCGTCCTGACTGTGGGATCTGAGCGGA
AGAAGCAGCTTTCGAACAACGATGGCTTGCTCTTCAATGTCATTGATCAA
CTCCCGGAATCCAAGGGCTACACGATCCTCTACGTCACGTCCCCGAGGGA
ACTTGAAGACACCGGTTCCGATTTCTACCAAGCGGAGCAGGATCCCCTCC
ACATGGACCTCAAGCGCGACTACTCCGCTCATGACAGTCAAACCCCTTCG
TCCAACAAGACGCTTTTCCAGGAATACCAATTCTTCACCCCAGGCATTTG
GATGGGAATTCTTGCAACCTTGGTTTTCCTGATGATTTTCTATGTTGGAC
TGGCTGCTCTTCTGAGCTTGGAGGTTCCCTATGCAGCATTCGAGAAGGAC
ACATCGGCCGCCGTGCAGAAGAAGCAGCAGTGAATGCGTTTGGGAAGCAT
TTCGCTGCTCGCTCTGGGAGCGACGACGGCGAGCGCAATCCGCGACACCT
CTCCCTTTTTCCTTGCATCGACCTCCCAGATCCCTTCTACGTCGGCACAG
CTTCGGACTGCTCCCGCTATTCTAGAAGATCTTTCCACGGGGCTGAGCGG
CTGCCCTTCCGACTACTATGTCATTGCTTCCCAGCCCGGTGTGCACAGCA
CCGACTTCGCTACCCGCCAGTCCGCACCGCGCCTCGGTGCGAAGATGACA
GGAAAGGACAAGAACATCCGGGCAAAGATGATTGTGAATGAAGTAGTGGG
CGAGATAGAGGCGAAGGATGTCCAGAAGCTGCTCGAGAAGGAGTGCGGGG
CTGAATCGACCGTGATCGACGCTTCCTCTGATTCTTACTCTGCCGATTTT
GCTGCGGAGTCCCGTATCATCGTTGTTGACTTGCCCGTCCTGACTGTGGG
ATCTGAGCGGAAGAAGCAGCTTTCGAACAACGATGGCTTGCTCTTCAATG
TCATTGATCAACTCCCGGAATCCAAGGGCTACACGATCCTCTACGTCACG
TCCCCGAGGGAACTTGAAGACACCGGTTCCGATTTCTACCAAGCGGAGCA
GGATCCCCTCCACATGGACCTCAAGCGCGACTACTCCGCTCATGACAGTC
AAACCCCTTCGTCCAACAAGACGCTTTTCCAGGAATACCAATTCTTCACC
CCAGGCATTTGGATGGGAATTCTTGCAACCTTGGTTTTCCTGATGATTTT
CTATGTTGGACTGGCTGCTCTTCTGAGCTTGGAGGTTCCCTATGCAGCAT
TCGAGAAGGACACATCGGCCGCCGTGCAGAAGAAGCAGCAGTGAATGCGT
TTGGGAAGCATTTCGCTGCTCGCTCTGGGAGCGACGACGGCGAGCGCAAT
CCGCGACACCTCTCCCTTTTTCCTTGCATCGACCTCCCAGATCCCTTCTA
CGTCGGCACAGCTTCGGACTGCTCCCGCTATTCTAGAAGATCTTTCCACG
GGGCTGAGCGGCTGCCCTTCCGACTACTATGTCATTGCTTCCCAGCCCGG
TGTGCACAGCACCGACTTCGCTACCCGCCAGTCCGCACCGCGCCTCGGTG
CGAAGATGACAGGAAAGGACAAGAACATCCGGGCAAAGATGATTGTGAAT
GAAGTAGTGGGCGAGATAGAGGCGAAGGATGTCCAGAAGCTGCTCGAGAA
GGAGTGCGGGGCTGAATCGACCGTGATCGACGCTTCCTCTGATTCTTACT
CTGCCGATTTTGCTGCGGAGTCCCGTATCATCGTTGTTGACTTGCCCGTC
CTGACTGTGGGATCTGAGCGGAAGAAGCAGCTTTCGAACAACGATGGCTT
GCTCTTCAATGTCATTGATCAACTCCCGGAATCCAAGGGCTACACGATCC
TCTACGTCACGTCCCCGAGGGAACTTGAAGACACCGGTTCCGATTTCTAC
CAAGCGGAGCAGGATCCCCTCCACATGGACCTCAAGCGCGACTACTCCGC
TCATGACAGTCAAACCCCTTCGTCCAACAAGACGCTTTTCCAGGAATACC
AATTCTTCACCCCAGGCATTTGGATGGGAATTCTTGCAACCTTGGTTTTC
CTGATGATTTTCTATGTTGGACTGGCTGCTCTTCTGAGCTTGGAGGTTCC
CTATGCAGCATTCGAGAAGGACACATCGGCCGCCGTGCAGAAGAAGCAGC
AGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_10725CAN33_10725Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10725-T1CAN33_10725-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10725-T1.exon1CAN33_10725-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_10725-T1.exon2CAN33_10725-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_10725-T1.exon3CAN33_10725-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_10725-T1.exon4CAN33_10725-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_10725-T1.exon5CAN33_10725-T1.exon5Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_10725-T1.cdsCAN33_10725-T1.cdsAspergillus niger FDAARGOS_311CDS


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-18)
ProductVacuolar ATP synthase subunit S1 (ATP6S1) family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:220232..221330 +
Powered by Drupal