You are here

Home

CAN33_11380-T1, CAN33_11380-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_11380-T1
Unique NameCAN33_11380-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:621710..623505+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_11380-T1 ID=CAN33_11380-T1|Name=CAN33_11380-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1796bp|location=Sequence derived from alignment at NKJJ01000009.1:621710..623505+ (Aspergillus niger FDAARGOS_311)
ATGCGCTATCTTGACTGGGTACACCGCGTCAACCTGGCAGTGGCTCGTAG
CCCTGTCGGGTGGTGGTTTCGTCTGGAAAACTCAGGTCATGTAGGTTTGC
TGGCTGAGCACGCGACACGGTGGTGAACTAATCCTGCGCAGCCTAATGAA
CGAAAAGGCAGCTTTTTCTTTACCGAGATGCGCGCCGGTTTAGCGACGTT
TTTCGCCATGGCCTACATCATTAGCGTGAATGCCACCATCACCTCCGACA
CGGGCGGAACCTGCGTCTGCCCACCCGAAAGCTATGCCGACCAATGCGAC
ACCAACACCGAATATCTGCTGTGCGTGCAGGAGGTGAAGCGCGATATTGT
CACCGCGACCGCCGCTATCGCTGCGCTCTCCACCTTCTTTATGGGCGTTT
TCTCGAACTTGCCCGTGGCGCTGGCACCAGGCATGGGGCTGAACGCATAC
TTTGCCTACACCGTGGTCGGTCACCACGGCTTTGGCATGATTCCCTACAG
AGTGGCTCTGACCGCGGTCTTTGTCGAAGGATGGGTCTTTCTGGCCTTGA
CGCTACTGGGGATCCGCCAGTGGTTGGCCCGCGCGCTGCCTGCGTCGATC
AAGCTGGCAACCGGAACGGGCATTGGGCTGTATCTTACGTTGATTGGACT
GACCTACAGTGCGGGAATCGGGTTGGTAACAGGCGCCACGGACTCGCCTA
TTGAACTGGCAGGCTGTGTGGATAGTCTCCGCGATGCGACGACCGGCCTC
TGTCCGTCGGACGCAAAGATGCGCAATCCGACCATGTGGATCGGGATATT
CTGTGGTGGAGTCCTGACAGCTCTGCTGATGCTTTATCGGGTGAAAGGCG
CCGTCATTATAGGAATCCTGCTGGTGTCCATCATCTCGTGGCCGCGACCG
ACCCCTGTGACGTATTTCCCGCACACTGAACTGGGTAACAGCATGTTTGA
CTTCTTCAAGCAAGTCGTTACCTTCCACCCGATCAAGCATACGCTGGTCG
CACAGGACTGGGATATCACGGGGCACGGATCGCAGTTTGGGCTGGCCTTC
ATTACCTTCCTGGTTGGTTGCATGATGTCACCCGCTAAAAACGGCAAGCT
AATCCATGCAGTATGTGGATATCCTCGATACCACCGGCACGCTATACTCC
ATGGCGCGATTTGCCGGGACGGTTGATCCTCGCACGCAGGATTTCGAAGG
CAGTGCTCTGGCCTACGTAAGTGATTTTCCCATGTGTTGCGCAACCTTGA
CTGACTAGTCAGATGGTGGACGCCATTTCCGTCTCGATCGGATCCCTCTT
CGGCACGTCTCCTGTCACGGCATTTGTCGAAAGTGGCGCCGGAATCTCCG
AAGGCGGTAAGACCGGGCTCACCTCCTGCATGACGGGCATCTGCTTCTTC
ATTGCCGTATTCTTCGCCCCGATCTTCGCCTCCATTCCCCCTTGGGCCAC
TGGCTGCACTCTGGTGATCGTGGGAGCATTGATGGTTAAGGCGGCGGCCG
AGATCAACTGGCGATACCTTGGCGACGCGGTGCCCGCCTTCCTGACCATT
GCCATCATGCCGTTCACCTACAGCATCGCTTACGGGTTGATCGCGGGTAT
TTTGAGCTACATCACGCTGAACGGCATCATCTGGGCGATCGAGAAATTGA
CGGGGGACGGATCGTGCCCCCCAATAAGGATGAAAAGGAACCCTGGTCGT
GGAGGATTCCGGGCGGATTCTTCCCGCCCTGGCTGCGGCGCGCCGTTCGG
GGAAAGAAGGACTTCTGGCGGGAGGACGAAAGGGATCGCAGCGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000009.1:621710..623505+

>CAN33_11380-T1 ID=CAN33_11380-T1|Name=CAN33_11380-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6600bp|location=Sequence derived from alignment at NKJJ01000009.1:621710..623505+ (Aspergillus niger FDAARGOS_311)
ATGCGCTATCTTGACTGGGTACACCGCGTCAACCTGGCAGTGGCTCGTAG
CCCTGTCGGGTGGTGGTTTCGTCTGGAAAACTCAGGTCATCCTAATGAAC
GAAAAGGCAGCTTTTTCTTTACCGAGATGCGCGCCGGTTTAGCGACGTTT
TTCGCCATGGCCTACATCATTAGCGTGAATGCCACCATCACCTCCGACAC
GGGCGGAACCTGCGTCTGCCCACCCGAAAGCTATGCCGACCAATGCGACA
CCAACACCGAATATCTGCTGTGCGTGCAGGAGGTGAAGCGCGATATTGTC
ACCGCGACCGCCGCTATCGCTGCGCTCTCCACCTTCTTTATGGGCGTTTT
CTCGAACTTGCCCGTGGCGCTGGCACCAGGCATGGGGCTGAACGCATACT
TTGCCTACACCGTGGTCGGTCACCACGGCTTTGGCATGATTCCCTACAGA
GTGGCTCTGACCGCGGTCTTTGTCGAAGGATGGGTCTTTCTGGCCTTGAC
GCTACTGGGGATCCGCCAGTGGTTGGCCCGCGCGCTGCCTGCGTCGATCA
AGCTGGCAACCGGAACGGGCATTGGGCTGTATCTTACGTTGATTGGACTG
ACCTACAGTGCGGGAATCGGGTTGGTAACAGGCGCCACGGACTCGCCTAT
TGAACTGGCAGGCTGTGTGGATAGTCTCCGCGATGCGACGACCGGCCTCT
GTCCGTCGGACGCAAAGATGCGCAATCCGACCATGTGGATCGGGATATTC
TGTGGTGGAGTCCTGACAGCTCTGCTGATGCTTTATCGGGTGAAAGGCGC
CGTCATTATAGGAATCCTGCTGGTGTCCATCATCTCGTGGCCGCGACCGA
CCCCTGTGACGTATTTCCCGCACACTGAACTGGGTAACAGCATGTTTGAC
TTCTTCAAGCAAGTCGTTACCTTCCACCCGATCAAGCATACGCTGGTCGC
ACAGGACTGGGATATCACGGGGCACGGATCGCAGTTTGGGCTGGCCTTCA
TTACCTTCCTGTATGTGGATATCCTCGATACCACCGGCACGCTATACTCC
ATGGCGCGATTTGCCGGGACGGTTGATCCTCGCACGCAGGATTTCGAAGG
CAGTGCTCTGGCCTACATGGTGGACGCCATTTCCGTCTCGATCGGATCCC
TCTTCGGCACGTCTCCTGTCACGGCATTTGTCGAAAGTGGCGCCGGAATC
TCCGAAGGCGGTAAGACCGGGCTCACCTCCTGCATGACGGGCATCTGCTT
CTTCATTGCCGTATTCTTCGCCCCGATCTTCGCCTCCATTCCCCCTTGGG
CCACTGGCTGCACTCTGGTGATCGTGGGAGCATTGATGGTTAAGGCGGCG
GCCGAGATCAACTGGCGATACCTTGGCGACGCGGTGCCCGCCTTCCTGAC
CATTGCCATCATGCCGTTCACCTACAGCATCGCTTACGGGTTGATCGCGG
GTATTTTGAGCTACATCACGCTGAACGGCATCATCTGGGCGATCGAGAAA
TTGACGGGGGACGGATCGTGCCCCCCAATAAGGATGAAAAGGAACCCTGG
TCGTGGAGGATTCCGGGCGGATTCTTCCCGCCCTGGCTGCGGCGCGCCGT
TCGGGGAAAGAAGGACTTCTGGCGGGAGGACGAAAGGGATCGCAGCGTGA
ATGCGCTATCTTGACTGGGTACACCGCGTCAACCTGGCAGTGGCTCGTAG
CCCTGTCGGGTGGTGGTTTCGTCTGGAAAACTCAGGTCATCCTAATGAAC
GAAAAGGCAGCTTTTTCTTTACCGAGATGCGCGCCGGTTTAGCGACGTTT
TTCGCCATGGCCTACATCATTAGCGTGAATGCCACCATCACCTCCGACAC
GGGCGGAACCTGCGTCTGCCCACCCGAAAGCTATGCCGACCAATGCGACA
CCAACACCGAATATCTGCTGTGCGTGCAGGAGGTGAAGCGCGATATTGTC
ACCGCGACCGCCGCTATCGCTGCGCTCTCCACCTTCTTTATGGGCGTTTT
CTCGAACTTGCCCGTGGCGCTGGCACCAGGCATGGGGCTGAACGCATACT
TTGCCTACACCGTGGTCGGTCACCACGGCTTTGGCATGATTCCCTACAGA
GTGGCTCTGACCGCGGTCTTTGTCGAAGGATGGGTCTTTCTGGCCTTGAC
GCTACTGGGGATCCGCCAGTGGTTGGCCCGCGCGCTGCCTGCGTCGATCA
AGCTGGCAACCGGAACGGGCATTGGGCTGTATCTTACGTTGATTGGACTG
ACCTACAGTGCGGGAATCGGGTTGGTAACAGGCGCCACGGACTCGCCTAT
TGAACTGGCAGGCTGTGTGGATAGTCTCCGCGATGCGACGACCGGCCTCT
GTCCGTCGGACGCAAAGATGCGCAATCCGACCATGTGGATCGGGATATTC
TGTGGTGGAGTCCTGACAGCTCTGCTGATGCTTTATCGGGTGAAAGGCGC
CGTCATTATAGGAATCCTGCTGGTGTCCATCATCTCGTGGCCGCGACCGA
CCCCTGTGACGTATTTCCCGCACACTGAACTGGGTAACAGCATGTTTGAC
TTCTTCAAGCAAGTCGTTACCTTCCACCCGATCAAGCATACGCTGGTCGC
ACAGGACTGGGATATCACGGGGCACGGATCGCAGTTTGGGCTGGCCTTCA
TTACCTTCCTGTATGTGGATATCCTCGATACCACCGGCACGCTATACTCC
ATGGCGCGATTTGCCGGGACGGTTGATCCTCGCACGCAGGATTTCGAAGG
CAGTGCTCTGGCCTACATGGTGGACGCCATTTCCGTCTCGATCGGATCCC
TCTTCGGCACGTCTCCTGTCACGGCATTTGTCGAAAGTGGCGCCGGAATC
TCCGAAGGCGGTAAGACCGGGCTCACCTCCTGCATGACGGGCATCTGCTT
CTTCATTGCCGTATTCTTCGCCCCGATCTTCGCCTCCATTCCCCCTTGGG
CCACTGGCTGCACTCTGGTGATCGTGGGAGCATTGATGGTTAAGGCGGCG
GCCGAGATCAACTGGCGATACCTTGGCGACGCGGTGCCCGCCTTCCTGAC
CATTGCCATCATGCCGTTCACCTACAGCATCGCTTACGGGTTGATCGCGG
GTATTTTGAGCTACATCACGCTGAACGGCATCATCTGGGCGATCGAGAAA
TTGACGGGGGACGGATCGTGCCCCCCAATAAGGATGAAAAGGAACCCTGG
TCGTGGAGGATTCCGGGCGGATTCTTCCCGCCCTGGCTGCGGCGCGCCGT
TCGGGGAAAGAAGGACTTCTGGCGGGAGGACGAAAGGGATCGCAGCGTGA
ATGCGCTATCTTGACTGGGTACACCGCGTCAACCTGGCAGTGGCTCGTAG
CCCTGTCGGGTGGTGGTTTCGTCTGGAAAACTCAGGTCATCCTAATGAAC
GAAAAGGCAGCTTTTTCTTTACCGAGATGCGCGCCGGTTTAGCGACGTTT
TTCGCCATGGCCTACATCATTAGCGTGAATGCCACCATCACCTCCGACAC
GGGCGGAACCTGCGTCTGCCCACCCGAAAGCTATGCCGACCAATGCGACA
CCAACACCGAATATCTGCTGTGCGTGCAGGAGGTGAAGCGCGATATTGTC
ACCGCGACCGCCGCTATCGCTGCGCTCTCCACCTTCTTTATGGGCGTTTT
CTCGAACTTGCCCGTGGCGCTGGCACCAGGCATGGGGCTGAACGCATACT
TTGCCTACACCGTGGTCGGTCACCACGGCTTTGGCATGATTCCCTACAGA
GTGGCTCTGACCGCGGTCTTTGTCGAAGGATGGGTCTTTCTGGCCTTGAC
GCTACTGGGGATCCGCCAGTGGTTGGCCCGCGCGCTGCCTGCGTCGATCA
AGCTGGCAACCGGAACGGGCATTGGGCTGTATCTTACGTTGATTGGACTG
ACCTACAGTGCGGGAATCGGGTTGGTAACAGGCGCCACGGACTCGCCTAT
TGAACTGGCAGGCTGTGTGGATAGTCTCCGCGATGCGACGACCGGCCTCT
GTCCGTCGGACGCAAAGATGCGCAATCCGACCATGTGGATCGGGATATTC
TGTGGTGGAGTCCTGACAGCTCTGCTGATGCTTTATCGGGTGAAAGGCGC
CGTCATTATAGGAATCCTGCTGGTGTCCATCATCTCGTGGCCGCGACCGA
CCCCTGTGACGTATTTCCCGCACACTGAACTGGGTAACAGCATGTTTGAC
TTCTTCAAGCAAGTCGTTACCTTCCACCCGATCAAGCATACGCTGGTCGC
ACAGGACTGGGATATCACGGGGCACGGATCGCAGTTTGGGCTGGCCTTCA
TTACCTTCCTGTATGTGGATATCCTCGATACCACCGGCACGCTATACTCC
ATGGCGCGATTTGCCGGGACGGTTGATCCTCGCACGCAGGATTTCGAAGG
CAGTGCTCTGGCCTACATGGTGGACGCCATTTCCGTCTCGATCGGATCCC
TCTTCGGCACGTCTCCTGTCACGGCATTTGTCGAAAGTGGCGCCGGAATC
TCCGAAGGCGGTAAGACCGGGCTCACCTCCTGCATGACGGGCATCTGCTT
CTTCATTGCCGTATTCTTCGCCCCGATCTTCGCCTCCATTCCCCCTTGGG
CCACTGGCTGCACTCTGGTGATCGTGGGAGCATTGATGGTTAAGGCGGCG
GCCGAGATCAACTGGCGATACCTTGGCGACGCGGTGCCCGCCTTCCTGAC
CATTGCCATCATGCCGTTCACCTACAGCATCGCTTACGGGTTGATCGCGG
GTATTTTGAGCTACATCACGCTGAACGGCATCATCTGGGCGATCGAGAAA
TTGACGGGGGACGGATCGTGCCCCCCAATAAGGATGAAAAGGAACCCTGG
TCGTGGAGGATTCCGGGCGGATTCTTCCCGCCCTGGCTGCGGCGCGCCGT
TCGGGGAAAGAAGGACTTCTGGCGGGAGGACGAAAGGGATCGCAGCGTGA
ATGCGCTATCTTGACTGGGTACACCGCGTCAACCTGGCAGTGGCTCGTAG
CCCTGTCGGGTGGTGGTTTCGTCTGGAAAACTCAGGTCATCCTAATGAAC
GAAAAGGCAGCTTTTTCTTTACCGAGATGCGCGCCGGTTTAGCGACGTTT
TTCGCCATGGCCTACATCATTAGCGTGAATGCCACCATCACCTCCGACAC
GGGCGGAACCTGCGTCTGCCCACCCGAAAGCTATGCCGACCAATGCGACA
CCAACACCGAATATCTGCTGTGCGTGCAGGAGGTGAAGCGCGATATTGTC
ACCGCGACCGCCGCTATCGCTGCGCTCTCCACCTTCTTTATGGGCGTTTT
CTCGAACTTGCCCGTGGCGCTGGCACCAGGCATGGGGCTGAACGCATACT
TTGCCTACACCGTGGTCGGTCACCACGGCTTTGGCATGATTCCCTACAGA
GTGGCTCTGACCGCGGTCTTTGTCGAAGGATGGGTCTTTCTGGCCTTGAC
GCTACTGGGGATCCGCCAGTGGTTGGCCCGCGCGCTGCCTGCGTCGATCA
AGCTGGCAACCGGAACGGGCATTGGGCTGTATCTTACGTTGATTGGACTG
ACCTACAGTGCGGGAATCGGGTTGGTAACAGGCGCCACGGACTCGCCTAT
TGAACTGGCAGGCTGTGTGGATAGTCTCCGCGATGCGACGACCGGCCTCT
GTCCGTCGGACGCAAAGATGCGCAATCCGACCATGTGGATCGGGATATTC
TGTGGTGGAGTCCTGACAGCTCTGCTGATGCTTTATCGGGTGAAAGGCGC
CGTCATTATAGGAATCCTGCTGGTGTCCATCATCTCGTGGCCGCGACCGA
CCCCTGTGACGTATTTCCCGCACACTGAACTGGGTAACAGCATGTTTGAC
TTCTTCAAGCAAGTCGTTACCTTCCACCCGATCAAGCATACGCTGGTCGC
ACAGGACTGGGATATCACGGGGCACGGATCGCAGTTTGGGCTGGCCTTCA
TTACCTTCCTGTATGTGGATATCCTCGATACCACCGGCACGCTATACTCC
ATGGCGCGATTTGCCGGGACGGTTGATCCTCGCACGCAGGATTTCGAAGG
CAGTGCTCTGGCCTACATGGTGGACGCCATTTCCGTCTCGATCGGATCCC
TCTTCGGCACGTCTCCTGTCACGGCATTTGTCGAAAGTGGCGCCGGAATC
TCCGAAGGCGGTAAGACCGGGCTCACCTCCTGCATGACGGGCATCTGCTT
CTTCATTGCCGTATTCTTCGCCCCGATCTTCGCCTCCATTCCCCCTTGGG
CCACTGGCTGCACTCTGGTGATCGTGGGAGCATTGATGGTTAAGGCGGCG
GCCGAGATCAACTGGCGATACCTTGGCGACGCGGTGCCCGCCTTCCTGAC
CATTGCCATCATGCCGTTCACCTACAGCATCGCTTACGGGTTGATCGCGG
GTATTTTGAGCTACATCACGCTGAACGGCATCATCTGGGCGATCGAGAAA
TTGACGGGGGACGGATCGTGCCCCCCAATAAGGATGAAAAGGAACCCTGG
TCGTGGAGGATTCCGGGCGGATTCTTCCCGCCCTGGCTGCGGCGCGCCGT
TCGGGGAAAGAAGGACTTCTGGCGGGAGGACGAAAGGGATCGCAGCGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_11380CAN33_11380Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11380-T1.exon1CAN33_11380-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_11380-T1.exon2CAN33_11380-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_11380-T1.exon3CAN33_11380-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_11380-T1.exon4CAN33_11380-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11380-T1.cdsCAN33_11380-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11380-T1CAN33_11380-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000091.2
DBxrefInterPro:IPR006043
DBxrefPFAM:PF00860
ProductPermease family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:621710..623505 +
Powered by Drupal