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CAN33_11620-T1, CAN33_11620-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_11620-T1
Unique NameCAN33_11620-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000009.1:785757..787041-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_11620-T1 ID=CAN33_11620-T1|Name=CAN33_11620-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1285bp|location=Sequence derived from alignment at NKJJ01000009.1:785757..787041- (Aspergillus niger FDAARGOS_311)
ATGCCTTCACTCCGTCTTCCCAAACTACCAATACCCCGGCCCTCCTACCG
GGGCTACTCCACCTCCGCACCATCCCCTTCCTCACGCCTGAACCTCCCCA
TCGACTACAGATCGACACCGCTCCTCCACCACACGGCCTCCAGCCTCTCA
AACCACCCAGACCTCCCTAGCAATGCGACCTCCAAATCCATCAACTTCTA
CCAAGCCATCAACTCCGCATTACGCACCGCCCTCTCCACCTCCAACAAGG
TGATGCTCTTCGGCGAAGATGTCGCTTTTGGCGGCGTCTTCCGCTGCTCG
ATGGATCTACAAACCGAATTCGGTTCTGAACGGGTCTTCAACACACCCCT
AACAGAGCAAGGGATCGTCGGCTTTGCAATCGGTGCAGCGGCCCAGGGAA
TGAAGCCTGTTGCGGAGATTCAATTCGCAGACTACGTGTTCCCAGCGTTC
GATCAGATCGTGAACGAGGCGGCGAAATTCCGGTTCCGGGAGGGAGCAAC
CGGTGTGGATATTGGGGGGATGGTGGTGCGGATGCCGTGTGGTGCGGTCG
GACATGGTGCTTTGTGGGTGGCATACCATGTTCCTGTTTGCTGAGTAGGG
GAAGAAGATGGCTAACGCTGTGGACTACAAACTAGGTACCACTCCCAATC
ACCAGAAGCACTGTTCGCACATGTTCCTGGCGTACAAGTCGTCATGCCTC
GCTCCCCATCCCAAGCTAAAGGCCTGCTCTTGTCCTCGATCTTTGAGTCT
CAGAATCCCGTCATCTTCATGGAACCGAAAATCCTCTATCGTGCCGCGGT
AGAACACGTCCCGAGCGAGTACTACACCATCCCATTGAACACGGCGGAGG
TTATTAAGCCAGGGAACGACCTGACGATAGTCTCGTACGGACAGCCACTA
TACCTCTGCTCCGCGGCCATCGAAGCAGCCGAGAGGGCATTCGGGGCGAG
TATCGAGCTGATCGATCTGCGCACGATCTACCCGTGGGACAGACCTACGG
TATTGGATAGTGTGAAGAAGACGGGACGGGCGATCGTCGTCCATGAGAGC
ATGATCAACTACGGAGTCGGCGCCGAGGTGGCTGCTACCATACAAGATGG
AGCGTTCTTGCGTCTAGAGGCACCGGTCAAGAGAGTCGCGGGATGGAGTA
CGCATACCGGACTGATGTATGAGAAGTTTGTGATTCCGGATGTTGCGAGT
ACGTATATCTATCCTATACACGCCTGAAATATGCTAACGATATCCAGGGA
TATACGATGCGATCAAGCAGACTCTTGAGTATTGA
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Coding sequence (CDS) from alignment at NKJJ01000009.1:785757..787041-

>CAN33_11620-T1 ID=CAN33_11620-T1|Name=CAN33_11620-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3492bp|location=Sequence derived from alignment at NKJJ01000009.1:785757..787041- (Aspergillus niger FDAARGOS_311)
GGATATACGATGCGATCAAGCAGACTCTTGAGTATTGAGTACCACTCCCA
ATCACCAGAAGCACTGTTCGCACATGTTCCTGGCGTACAAGTCGTCATGC
CTCGCTCCCCATCCCAAGCTAAAGGCCTGCTCTTGTCCTCGATCTTTGAG
TCTCAGAATCCCGTCATCTTCATGGAACCGAAAATCCTCTATCGTGCCGC
GGTAGAACACGTCCCGAGCGAGTACTACACCATCCCATTGAACACGGCGG
AGGTTATTAAGCCAGGGAACGACCTGACGATAGTCTCGTACGGACAGCCA
CTATACCTCTGCTCCGCGGCCATCGAAGCAGCCGAGAGGGCATTCGGGGC
GAGTATCGAGCTGATCGATCTGCGCACGATCTACCCGTGGGACAGACCTA
CGGTATTGGATAGTGTGAAGAAGACGGGACGGGCGATCGTCGTCCATGAG
AGCATGATCAACTACGGAGTCGGCGCCGAGGTGGCTGCTACCATACAAGA
TGGAGCGTTCTTGCGTCTAGAGGCACCGGTCAAGAGAGTCGCGGGATGGA
GTACGCATACCGGACTGATGTATGAGAAGTTTGTGATTCCGGATGTTGCG
AATGCCTTCACTCCGTCTTCCCAAACTACCAATACCCCGGCCCTCCTACC
GGGGCTACTCCACCTCCGCACCATCCCCTTCCTCACGCCTGAACCTCCCC
ATCGACTACAGATCGACACCGCTCCTCCACCACACGGCCTCCAGCCTCTC
AAACCACCCAGACCTCCCTAGCAATGCGACCTCCAAATCCATCAACTTCT
ACCAAGCCATCAACTCCGCATTACGCACCGCCCTCTCCACCTCCAACAAG
GTGATGCTCTTCGGCGAAGATGTCGCTTTTGGCGGCGTCTTCCGCTGCTC
GATGGATCTACAAACCGAATTCGGTTCTGAACGGGTCTTCAACACACCCC
TAACAGAGCAAGGGATCGTCGGCTTTGCAATCGGTGCAGCGGCCCAGGGA
ATGAAGCCTGTTGCGGAGATTCAATTCGCAGACTACGTGTTCCCAGCGTT
CGATCAGATCGTGAACGAGGCGGCGAAATTCCGGTTCCGGGAGGGAGCAA
CCGGTGTGGATATTGGGGGGATGGTGGTGCGGATGCCGTGTGGTGCGGTC
GGACATGGTGCTTTGGATATACGATGCGATCAAGCAGACTCTTGAGTATT
GAGTACCACTCCCAATCACCAGAAGCACTGTTCGCACATGTTCCTGGCGT
ACAAGTCGTCATGCCTCGCTCCCCATCCCAAGCTAAAGGCCTGCTCTTGT
CCTCGATCTTTGAGTCTCAGAATCCCGTCATCTTCATGGAACCGAAAATC
CTCTATCGTGCCGCGGTAGAACACGTCCCGAGCGAGTACTACACCATCCC
ATTGAACACGGCGGAGGTTATTAAGCCAGGGAACGACCTGACGATAGTCT
CGTACGGACAGCCACTATACCTCTGCTCCGCGGCCATCGAAGCAGCCGAG
AGGGCATTCGGGGCGAGTATCGAGCTGATCGATCTGCGCACGATCTACCC
GTGGGACAGACCTACGGTATTGGATAGTGTGAAGAAGACGGGACGGGCGA
TCGTCGTCCATGAGAGCATGATCAACTACGGAGTCGGCGCCGAGGTGGCT
GCTACCATACAAGATGGAGCGTTCTTGCGTCTAGAGGCACCGGTCAAGAG
AGTCGCGGGATGGAGTACGCATACCGGACTGATGTATGAGAAGTTTGTGA
TTCCGGATGTTGCGAATGCCTTCACTCCGTCTTCCCAAACTACCAATACC
CCGGCCCTCCTACCGGGGCTACTCCACCTCCGCACCATCCCCTTCCTCAC
GCCTGAACCTCCCCATCGACTACAGATCGACACCGCTCCTCCACCACACG
GCCTCCAGCCTCTCAAACCACCCAGACCTCCCTAGCAATGCGACCTCCAA
ATCCATCAACTTCTACCAAGCCATCAACTCCGCATTACGCACCGCCCTCT
CCACCTCCAACAAGGTGATGCTCTTCGGCGAAGATGTCGCTTTTGGCGGC
GTCTTCCGCTGCTCGATGGATCTACAAACCGAATTCGGTTCTGAACGGGT
CTTCAACACACCCCTAACAGAGCAAGGGATCGTCGGCTTTGCAATCGGTG
CAGCGGCCCAGGGAATGAAGCCTGTTGCGGAGATTCAATTCGCAGACTAC
GTGTTCCCAGCGTTCGATCAGATCGTGAACGAGGCGGCGAAATTCCGGTT
CCGGGAGGGAGCAACCGGTGTGGATATTGGGGGGATGGTGGTGCGGATGC
CGTGTGGTGCGGTCGGACATGGTGCTTTGGATATACGATGCGATCAAGCA
GACTCTTGAGTATTGAGTACCACTCCCAATCACCAGAAGCACTGTTCGCA
CATGTTCCTGGCGTACAAGTCGTCATGCCTCGCTCCCCATCCCAAGCTAA
AGGCCTGCTCTTGTCCTCGATCTTTGAGTCTCAGAATCCCGTCATCTTCA
TGGAACCGAAAATCCTCTATCGTGCCGCGGTAGAACACGTCCCGAGCGAG
TACTACACCATCCCATTGAACACGGCGGAGGTTATTAAGCCAGGGAACGA
CCTGACGATAGTCTCGTACGGACAGCCACTATACCTCTGCTCCGCGGCCA
TCGAAGCAGCCGAGAGGGCATTCGGGGCGAGTATCGAGCTGATCGATCTG
CGCACGATCTACCCGTGGGACAGACCTACGGTATTGGATAGTGTGAAGAA
GACGGGACGGGCGATCGTCGTCCATGAGAGCATGATCAACTACGGAGTCG
GCGCCGAGGTGGCTGCTACCATACAAGATGGAGCGTTCTTGCGTCTAGAG
GCACCGGTCAAGAGAGTCGCGGGATGGAGTACGCATACCGGACTGATGTA
TGAGAAGTTTGTGATTCCGGATGTTGCGAATGCCTTCACTCCGTCTTCCC
AAACTACCAATACCCCGGCCCTCCTACCGGGGCTACTCCACCTCCGCACC
ATCCCCTTCCTCACGCCTGAACCTCCCCATCGACTACAGATCGACACCGC
TCCTCCACCACACGGCCTCCAGCCTCTCAAACCACCCAGACCTCCCTAGC
AATGCGACCTCCAAATCCATCAACTTCTACCAAGCCATCAACTCCGCATT
ACGCACCGCCCTCTCCACCTCCAACAAGGTGATGCTCTTCGGCGAAGATG
TCGCTTTTGGCGGCGTCTTCCGCTGCTCGATGGATCTACAAACCGAATTC
GGTTCTGAACGGGTCTTCAACACACCCCTAACAGAGCAAGGGATCGTCGG
CTTTGCAATCGGTGCAGCGGCCCAGGGAATGAAGCCTGTTGCGGAGATTC
AATTCGCAGACTACGTGTTCCCAGCGTTCGATCAGATCGTGAACGAGGCG
GCGAAATTCCGGTTCCGGGAGGGAGCAACCGGTGTGGATATTGGGGGGAT
GGTGGTGCGGATGCCGTGTGGTGCGGTCGGACATGGTGCTTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_11620CAN33_11620Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11620-T1CAN33_11620-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11620-T1.cdsCAN33_11620-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_11620-T1.exon3CAN33_11620-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_11620-T1.exon2CAN33_11620-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_11620-T1.exon1CAN33_11620-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR009014
DBxrefInterPro:IPR033248
DBxrefInterPro:IPR005475
DBxrefPFAM:PF02779
DBxrefPFAM:PF02780
ProductTransketolase pyrimidine binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000009.1supercontigNKJJ01000009.1:785757..787041 -
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