You are here

Home

CAN33_12740-T1, CAN33_12740-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_12740-T1
Unique NameCAN33_12740-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:353230..354998+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_12740-T1 ID=CAN33_12740-T1|Name=CAN33_12740-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1769bp|location=Sequence derived from alignment at NKJJ01000010.1:353230..354998+ (Aspergillus niger FDAARGOS_311)
ATGGTTTCTCCACGGACACTATTCACGGCCAGCCGCGTGCAAACATGGAC
CTACCTGCTTGGCGTGTGTCCATTCTCGATCGCATTCCTGGTCTTCATCA
ACTCGTCCATCTCATTTGTCGTCACGGAATTAATTGGACTCCGTAATGGA
GAAGGTGATGCGGTCGGAACCTTGGGCTTTGCCGACGAACTGCTGGCCCT
GGTTGCCTGCCCCTTGTGGGGAGTGCTGTCGGATCGCATCGGCGTCCGTC
ATGTAAGCGCTCATCCGTTGTTGCTACTTTCCCGCCCCAAAGGCCAGTTC
ACTTGTAAATTTTCTCATACATTGTATCTTTTACACAGGTCTGCACTACC
GGCTATGCTATCGTGGCTCTTGCCTTGGTACTCTTCGTCCAGGCAAAAAA
TGTCTACCCCCAGTTACTCCTGGGAAGACTGTTGTTCAGTCTTGGAGGCG
CCGCAGTATCAACGATGGTCACGGCGGTTCTTCCAGCCGTAGCCGGCTCA
CACTCGTCGTCACAGCATAAATCTACATCAGACTCTCGGACGAGTACGAG
CTCATCCTCCCGACTGGCTGGATTTGTAGGCATGTGTGCCGGATGTGGTG
CGCTCGTTGCTCTCGTTGTCTTCCTCCCCCTTCCAGCTCGGTTCCAGCAA
TGGGGTCTCTCACCAGCAGAAGCTATCCAGCGCAGCTACTATCTCGTGGC
TGCGGTATCTCTAGTTATCAGTATCCTCTGTTTCTTTGGGCTGAGGAACC
TCCCCGGAGAAGAGGGCAAATCATGGAGCGTGTTATGGTCCGCACGCCGG
CGCGGGACGCCGGATAGCGGCGAGGCGTGTTCGTATGCTCGCAAATTCCA
GTTGCCTTATCTCGAGCAGCTGGGCATTGCGTTCGCCTTGGGGTTCCGGA
ATTCAGATATATTTCTGGGTTACTTGGGCGGTTTCGTGGCGCGTGCGTCG
TCCGTGGGGATCTCGCTGTTCATCCCGCTCGCTGTTAACCACTATTATCG
CATGTCGGGGCTGTGCGGGAGCCAAGATGGCGAGGCTGAGAACCCTGGCG
ACTTAAAGAAATCATGCCATAAAGCCTACGTGCTCGCTTCGATTTTAACA
GGGGTCTCTCAGCTAGTCGCGCTGCTTGCAGCGCCAGCCTTCGGCTATCT
GTCGGAGCGATCGCGGCGCCGTCACGTGCCGCTTTTGGCAGCTTGCTTTG
CAGGCTTTGTGGGCTATACCACCTTTGCCTTGCTACCGAGTCCGGAATTC
AATGGGGAGTATGGCAGCCCCGGTGTATTTGTAGTGATGGGCCTGGTTGG
TATCAGCCAGATTGGAGCGATTGTCTGCAGTTTATCAGTACTGAGCAGCG
GCATTCTCAGTTTGAGCGAGGTAGGTAGGATGGACGACCAGTTATGGAGT
ACCCCGAGTGAACCCAGCGAGGATGAGGGTGAGGATGAGGATGAAAATGA
GAACAACAATGAGAACAACCCAGTCGACGACGAGGAAGAGGAGCACGGAG
AAGACCGACCTCTCATGACCCATCGTCCCGGCCGGAAAGAGCGGCACCTT
TCGCACTTGAAGGGATCAATTGCTGGGGTGTATTCCCTGTACGGTGGAGC
GGGTATCCTGCTCTTGACCAAGCTGGGTGGGCTCTTGTTCGATGTGCTGT
CGTCGGGAGCACCGTTCTACATCATGGCTGGGTTCAATGGGGCATTGCTG
CTGGCAGGCCTGGTGAGTGGATTCATTGGGCACTCAAGATCCGCTGGACC
AGCTGGGTTCGGTGTGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:353230..354998+

>CAN33_12740-T1 ID=CAN33_12740-T1|Name=CAN33_12740-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4770bp|location=Sequence derived from alignment at NKJJ01000010.1:353230..354998+ (Aspergillus niger FDAARGOS_311)
ATGGTTTCTCCACGGACACTATTCACGGCCAGCCGCGTGCAAACATGGAC
CTACCTGCTTGGCGTGTGTCCATTCTCGATCGCATTCCTGGTCTTCATCA
ACTCGTCCATCTCATTTGTCGTCACGGAATTAATTGGACTCCGTAATGGA
GAAGGTGATGCGGTCGGAACCTTGGGCTTTGCCGACGAACTGCTGGCCCT
GGTTGCCTGCCCCTTGTGGGGAGTGCTGTCGGATCGCATCGGCGTCCGTC
ATGTCTGCACTACCGGCTATGCTATCGTGGCTCTTGCCTTGGTACTCTTC
GTCCAGGCAAAAAATGTCTACCCCCAGTTACTCCTGGGAAGACTGTTGTT
CAGTCTTGGAGGCGCCGCAGTATCAACGATGGTCACGGCGGTTCTTCCAG
CCGTAGCCGGCTCACACTCGTCGTCACAGCATAAATCTACATCAGACTCT
CGGACGAGTACGAGCTCATCCTCCCGACTGGCTGGATTTGTAGGCATGTG
TGCCGGATGTGGTGCGCTCGTTGCTCTCGTTGTCTTCCTCCCCCTTCCAG
CTCGGTTCCAGCAATGGGGTCTCTCACCAGCAGAAGCTATCCAGCGCAGC
TACTATCTCGTGGCTGCGGTATCTCTAGTTATCAGTATCCTCTGTTTCTT
TGGGCTGAGGAACCTCCCCGGAGAAGAGGGCAAATCATGGAGCGTGTTAT
GGTCCGCACGCCGGCGCGGGACGCCGGATAGCGGCGAGGCGTGTTCGTAT
GCTCGCAAATTCCAGTTGCCTTATCTCGAGCAGCTGGGCATTGCGTTCGC
CTTGGGGTTCCGGAATTCAGATATATTTCTGGGTTACTTGGGCGGTTTCG
TGGCGCGTGCGTCGTCCGTGGGGATCTCGCTGTTCATCCCGCTCGCTGTT
AACCACTATTATCGCATGTCGGGGCTGTGCGGGAGCCAAGATGGCGAGGC
TGAGAACCCTGGCGACTTAAAGAAATCATGCCATAAAGCCTACGTGCTCG
CTTCGATTTTAACAGGGGTCTCTCAGCTAGTCGCGCTGCTTGCAGCGCCA
GCCTTCGGCTATCTGTCGGAGCGATCGCGGCGCCGTCACGTGCCGCTTTT
GGCAGCTTGCTTTGCAGGCTTTGTGGGCTATACCACCTTTGCCTTGCTAC
CGAGTCCGGAATTCAATGGGGAGTATGGCAGCCCCGGTGTATTTGTAGTG
ATGGGCCTGGTTGGTATCAGCCAGATTGGAGCGATTGTCTGCAGTTTATC
AGTACTGAGCAGCGGCATTCTCAGTTTGAGCGAGAACAACCCAGTCGACG
ACGAGGAAGAGGAGCACGGAGAAGACCGACCTCTCATGACCCATCGTCCC
GGCCGGAAAGAGCGGCACCTTTCGCACTTGAAGGGATCAATTGCTGGGGT
GTATTCCCTGTACGGTGGAGCGGGTATCCTGCTCTTGACCAAGCTGGGTG
GGCTCTTGTTCGATGTGCTGTCGTCGGGAGCACCGTTCTACATCATGGCT
GGGTTCAATGGGGCATTGCTGCTGGCAGGCCTGGTGAGTGGATTCATTGG
GCACTCAAGATCCGCTGGACCAGCTGGGTTCGGTGTGTAGATGGTTTCTC
CACGGACACTATTCACGGCCAGCCGCGTGCAAACATGGACCTACCTGCTT
GGCGTGTGTCCATTCTCGATCGCATTCCTGGTCTTCATCAACTCGTCCAT
CTCATTTGTCGTCACGGAATTAATTGGACTCCGTAATGGAGAAGGTGATG
CGGTCGGAACCTTGGGCTTTGCCGACGAACTGCTGGCCCTGGTTGCCTGC
CCCTTGTGGGGAGTGCTGTCGGATCGCATCGGCGTCCGTCATGTCTGCAC
TACCGGCTATGCTATCGTGGCTCTTGCCTTGGTACTCTTCGTCCAGGCAA
AAAATGTCTACCCCCAGTTACTCCTGGGAAGACTGTTGTTCAGTCTTGGA
GGCGCCGCAGTATCAACGATGGTCACGGCGGTTCTTCCAGCCGTAGCCGG
CTCACACTCGTCGTCACAGCATAAATCTACATCAGACTCTCGGACGAGTA
CGAGCTCATCCTCCCGACTGGCTGGATTTGTAGGCATGTGTGCCGGATGT
GGTGCGCTCGTTGCTCTCGTTGTCTTCCTCCCCCTTCCAGCTCGGTTCCA
GCAATGGGGTCTCTCACCAGCAGAAGCTATCCAGCGCAGCTACTATCTCG
TGGCTGCGGTATCTCTAGTTATCAGTATCCTCTGTTTCTTTGGGCTGAGG
AACCTCCCCGGAGAAGAGGGCAAATCATGGAGCGTGTTATGGTCCGCACG
CCGGCGCGGGACGCCGGATAGCGGCGAGGCGTGTTCGTATGCTCGCAAAT
TCCAGTTGCCTTATCTCGAGCAGCTGGGCATTGCGTTCGCCTTGGGGTTC
CGGAATTCAGATATATTTCTGGGTTACTTGGGCGGTTTCGTGGCGCGTGC
GTCGTCCGTGGGGATCTCGCTGTTCATCCCGCTCGCTGTTAACCACTATT
ATCGCATGTCGGGGCTGTGCGGGAGCCAAGATGGCGAGGCTGAGAACCCT
GGCGACTTAAAGAAATCATGCCATAAAGCCTACGTGCTCGCTTCGATTTT
AACAGGGGTCTCTCAGCTAGTCGCGCTGCTTGCAGCGCCAGCCTTCGGCT
ATCTGTCGGAGCGATCGCGGCGCCGTCACGTGCCGCTTTTGGCAGCTTGC
TTTGCAGGCTTTGTGGGCTATACCACCTTTGCCTTGCTACCGAGTCCGGA
ATTCAATGGGGAGTATGGCAGCCCCGGTGTATTTGTAGTGATGGGCCTGG
TTGGTATCAGCCAGATTGGAGCGATTGTCTGCAGTTTATCAGTACTGAGC
AGCGGCATTCTCAGTTTGAGCGAGAACAACCCAGTCGACGACGAGGAAGA
GGAGCACGGAGAAGACCGACCTCTCATGACCCATCGTCCCGGCCGGAAAG
AGCGGCACCTTTCGCACTTGAAGGGATCAATTGCTGGGGTGTATTCCCTG
TACGGTGGAGCGGGTATCCTGCTCTTGACCAAGCTGGGTGGGCTCTTGTT
CGATGTGCTGTCGTCGGGAGCACCGTTCTACATCATGGCTGGGTTCAATG
GGGCATTGCTGCTGGCAGGCCTGGTGAGTGGATTCATTGGGCACTCAAGA
TCCGCTGGACCAGCTGGGTTCGGTGTGTAGATGGTTTCTCCACGGACACT
ATTCACGGCCAGCCGCGTGCAAACATGGACCTACCTGCTTGGCGTGTGTC
CATTCTCGATCGCATTCCTGGTCTTCATCAACTCGTCCATCTCATTTGTC
GTCACGGAATTAATTGGACTCCGTAATGGAGAAGGTGATGCGGTCGGAAC
CTTGGGCTTTGCCGACGAACTGCTGGCCCTGGTTGCCTGCCCCTTGTGGG
GAGTGCTGTCGGATCGCATCGGCGTCCGTCATGTCTGCACTACCGGCTAT
GCTATCGTGGCTCTTGCCTTGGTACTCTTCGTCCAGGCAAAAAATGTCTA
CCCCCAGTTACTCCTGGGAAGACTGTTGTTCAGTCTTGGAGGCGCCGCAG
TATCAACGATGGTCACGGCGGTTCTTCCAGCCGTAGCCGGCTCACACTCG
TCGTCACAGCATAAATCTACATCAGACTCTCGGACGAGTACGAGCTCATC
CTCCCGACTGGCTGGATTTGTAGGCATGTGTGCCGGATGTGGTGCGCTCG
TTGCTCTCGTTGTCTTCCTCCCCCTTCCAGCTCGGTTCCAGCAATGGGGT
CTCTCACCAGCAGAAGCTATCCAGCGCAGCTACTATCTCGTGGCTGCGGT
ATCTCTAGTTATCAGTATCCTCTGTTTCTTTGGGCTGAGGAACCTCCCCG
GAGAAGAGGGCAAATCATGGAGCGTGTTATGGTCCGCACGCCGGCGCGGG
ACGCCGGATAGCGGCGAGGCGTGTTCGTATGCTCGCAAATTCCAGTTGCC
TTATCTCGAGCAGCTGGGCATTGCGTTCGCCTTGGGGTTCCGGAATTCAG
ATATATTTCTGGGTTACTTGGGCGGTTTCGTGGCGCGTGCGTCGTCCGTG
GGGATCTCGCTGTTCATCCCGCTCGCTGTTAACCACTATTATCGCATGTC
GGGGCTGTGCGGGAGCCAAGATGGCGAGGCTGAGAACCCTGGCGACTTAA
AGAAATCATGCCATAAAGCCTACGTGCTCGCTTCGATTTTAACAGGGGTC
TCTCAGCTAGTCGCGCTGCTTGCAGCGCCAGCCTTCGGCTATCTGTCGGA
GCGATCGCGGCGCCGTCACGTGCCGCTTTTGGCAGCTTGCTTTGCAGGCT
TTGTGGGCTATACCACCTTTGCCTTGCTACCGAGTCCGGAATTCAATGGG
GAGTATGGCAGCCCCGGTGTATTTGTAGTGATGGGCCTGGTTGGTATCAG
CCAGATTGGAGCGATTGTCTGCAGTTTATCAGTACTGAGCAGCGGCATTC
TCAGTTTGAGCGAGAACAACCCAGTCGACGACGAGGAAGAGGAGCACGGA
GAAGACCGACCTCTCATGACCCATCGTCCCGGCCGGAAAGAGCGGCACCT
TTCGCACTTGAAGGGATCAATTGCTGGGGTGTATTCCCTGTACGGTGGAG
CGGGTATCCTGCTCTTGACCAAGCTGGGTGGGCTCTTGTTCGATGTGCTG
TCGTCGGGAGCACCGTTCTACATCATGGCTGGGTTCAATGGGGCATTGCT
GCTGGCAGGCCTGGTGAGTGGATTCATTGGGCACTCAAGATCCGCTGGAC
CAGCTGGGTTCGGTGTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_12740CAN33_12740Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12740-T1.exon1CAN33_12740-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_12740-T1.exon2CAN33_12740-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_12740-T1.exon3CAN33_12740-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12740-T1.cdsCAN33_12740-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_12740-T1CAN33_12740-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Productmajor facilitator superfamily protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:353230..354998 +
Powered by Drupal