You are here

Home

CAN33_13255-T1, CAN33_13255-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_13255-T1
Unique NameCAN33_13255-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000010.1:734973..735899+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_13255-T1 ID=CAN33_13255-T1|Name=CAN33_13255-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=927bp|location=Sequence derived from alignment at NKJJ01000010.1:734973..735899+ (Aspergillus niger FDAARGOS_311)
ATGGCTATCGACCTTGAAAATGACATTGTCCTTCTCACTTGCGCAAGTGG
TAAGCAATGTTCCCATCTGATCCCGCTCCTCTACCGTAGGTGGAGGAGGC
TCCGCCTCGCTGTTCACAGCGTTCAATCCGAGAGGGATCTGAAGTCGCGC
TATCCGGAGGCCGAGGTGGTGCAGGGCGATATAGCCAAGCCAGAATACAG
AGACCAGATTTTGGCCGGTGCTACAGTCGTCGTATATATTGCCCCAGCAT
TTCATCCACAGGAAGCAGAAATTGGCTATGCCATGATTGAAGCCGCGCGT
CATGTGGCCCAGAACGGGACTTTTAAGCACTTCATCTACTCCTCTGTGCT
GCACCCGCAGCTTCGGAAGTTGATGAACCACGACTGCAAGCGCTACGTTG
AGGAATACCTCATTGAATCAGGACTCAACTACACGATTCTTCAGCCCAGC
CATTTTCTCGACATGTTCCCGGTCGAAACGTTGCTGCATCAAGCGGAACC
TGTCTTCCGCGCAGATTTTAATCCAGACACGGCCTTCTCGTTCACCATTT
TGCAGGACCTAGCAGAGGCTTTTGCCAAGGTGATTGAGGAAAGAGACAGA
CATTATCTCGCCGAGTACATGATCTGTTCAACCAGGCCCACCTCATATCG
AGATATCGTCGCCACGCTCGGTCATGTAACAGGTACACACATTGGTATTG
CGACGCAGGAGTTCTACGAGACCGCTGAGCGGCTGCAGTCCTTGGTGTCT
AAGGATGCTGGTGGTTGCCATCATACCACACGGGACGGTATCCATCGACT
GCAGCTTTACTATGACATTTATGGTATCAAAGGCAATCCTAATGTGCTGG
AATGGTTGATTGGTCGAAAGCCGATGACGGTGGAGGAGCATTTCCGGAAG
CGGGTCTCCATCAAAGAGGCTGATTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000010.1:734973..735899+

>CAN33_13255-T1 ID=CAN33_13255-T1|Name=CAN33_13255-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=927bp|location=Sequence derived from alignment at NKJJ01000010.1:734973..735899+ (Aspergillus niger FDAARGOS_311)
ATGGCTATCGACCTTGAAAATGACATTGTCCTTCTCACTTGCGCAAGTGG
TAAGCAATGTTCCCATCTGATCCCGCTCCTCTACCGTAGGTGGAGGAGGC
TCCGCCTCGCTGTTCACAGCGTTCAATCCGAGAGGGATCTGAAGTCGCGC
TATCCGGAGGCCGAGGTGGTGCAGGGCGATATAGCCAAGCCAGAATACAG
AGACCAGATTTTGGCCGGTGCTACAGTCGTCGTATATATTGCCCCAGCAT
TTCATCCACAGGAAGCAGAAATTGGCTATGCCATGATTGAAGCCGCGCGT
CATGTGGCCCAGAACGGGACTTTTAAGCACTTCATCTACTCCTCTGTGCT
GCACCCGCAGCTTCGGAAGTTGATGAACCACGACTGCAAGCGCTACGTTG
AGGAATACCTCATTGAATCAGGACTCAACTACACGATTCTTCAGCCCAGC
CATTTTCTCGACATGTTCCCGGTCGAAACGTTGCTGCATCAAGCGGAACC
TGTCTTCCGCGCAGATTTTAATCCAGACACGGCCTTCTCGTTCACCATTT
TGCAGGACCTAGCAGAGGCTTTTGCCAAGGTGATTGAGGAAAGAGACAGA
CATTATCTCGCCGAGTACATGATCTGTTCAACCAGGCCCACCTCATATCG
AGATATCGTCGCCACGCTCGGTCATGTAACAGGTACACACATTGGTATTG
CGACGCAGGAGTTCTACGAGACCGCTGAGCGGCTGCAGTCCTTGGTGTCT
AAGGATGCTGGTGGTTGCCATCATACCACACGGGACGGTATCCATCGACT
GCAGCTTTACTATGACATTTATGGTATCAAAGGCAATCCTAATGTGCTGG
AATGGTTGATTGGTCGAAAGCCGATGACGGTGGAGGAGCATTTCCGGAAG
CGGGTCTCCATCAAAGAGGCTGATTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_13255CAN33_13255Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13255-T1.exon1CAN33_13255-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13255-T1.cdsCAN33_13255-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_13255-T1CAN33_13255-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
ProductNmrA-like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000010.1supercontigNKJJ01000010.1:734973..735899 +
Powered by Drupal