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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:1686688..1687554- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_14810-T1 ID=CAN33_14810-T1|Name=CAN33_14810-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=867bp|location=Sequence derived from alignment at NKJJ01000010.1:1686688..1687554- (Aspergillus niger FDAARGOS_311)
ATGCCTCTCATCAACCTACCAGGAGAGATACTGCTTGGCATTGCCAGCTT
TCTGTCCAGTGAAAACGATATTGATAGTCTTGCCAAAACTAGCACCCGGC
TTCATCACCTCCTCAACTCTGTTTTGTACAGACACAACGTGACGCACTCA
AACAGTTCAGCGCTGTTGTGGGCTGCAACTAAGGGGCAAGATACTACTGC
CCGGTTGTGCATACAGCAAGGAGCAGATCCCAACACAGCCGGTGAGATGA
ACGCAACGCCGTTGTCACTGGCAGTGAACCATGGGCATTCGAACGTTGTG
GCGGTCTTACTTGAATGCAAGGACACCGATGTGAATACGGGTACGGATAG
AGGGTTCGCGCCCCTATATTGCGCCGCACTTTTTGGAGTGAGAGATGTCG
TAAAATTACTGCTAGAGGATACACGAGTCGATATGGATGTCAGAGGTAGT
AGATGGAGAGAAGCGCCTTTGCATGCAGCAGCAATTGGGGGCAACACAGA
AGTGGTGAAGCTACTTCTGGATGATCCAAGGGTCGATGTCAATGTCAGAG
ACCTGAGGCAGTTCACTCCTTTGGCGCTAGCTGCCGAAAGTGGCTACGCA
GACACCGTGCGTCTCCTACTTGATGATGAAAGAGTGGATGTGAACCTCAC
AGACAGTGAGAATAGGACGCCTCTTTGTTTAGCTGCAGGCAAGGGCATCG
CAGAAATAGTGCGGCTGCTACTCCAGCGACCGGATGTGGATGTTCACTGC
GCCTGTGGCCATGAAAATTCAACGCCACTGCATGAAGCAGTACATTCCGG
ACAAGTGGATCAGGTGAAGCTACTTTTTGAGCATGGTGGAGTAGACGTGA
GCTTGGAAAACTCTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:1686688..1687554- >CAN33_14810-T1 ID=CAN33_14810-T1|Name=CAN33_14810-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=867bp|location=Sequence derived from alignment at NKJJ01000010.1:1686688..1687554- (Aspergillus niger FDAARGOS_311)
ATGCCTCTCATCAACCTACCAGGAGAGATACTGCTTGGCATTGCCAGCTT
TCTGTCCAGTGAAAACGATATTGATAGTCTTGCCAAAACTAGCACCCGGC
TTCATCACCTCCTCAACTCTGTTTTGTACAGACACAACGTGACGCACTCA
AACAGTTCAGCGCTGTTGTGGGCTGCAACTAAGGGGCAAGATACTACTGC
CCGGTTGTGCATACAGCAAGGAGCAGATCCCAACACAGCCGGTGAGATGA
ACGCAACGCCGTTGTCACTGGCAGTGAACCATGGGCATTCGAACGTTGTG
GCGGTCTTACTTGAATGCAAGGACACCGATGTGAATACGGGTACGGATAG
AGGGTTCGCGCCCCTATATTGCGCCGCACTTTTTGGAGTGAGAGATGTCG
TAAAATTACTGCTAGAGGATACACGAGTCGATATGGATGTCAGAGGTAGT
AGATGGAGAGAAGCGCCTTTGCATGCAGCAGCAATTGGGGGCAACACAGA
AGTGGTGAAGCTACTTCTGGATGATCCAAGGGTCGATGTCAATGTCAGAG
ACCTGAGGCAGTTCACTCCTTTGGCGCTAGCTGCCGAAAGTGGCTACGCA
GACACCGTGCGTCTCCTACTTGATGATGAAAGAGTGGATGTGAACCTCAC
AGACAGTGAGAATAGGACGCCTCTTTGTTTAGCTGCAGGCAAGGGCATCG
CAGAAATAGTGCGGCTGCTACTCCAGCGACCGGATGTGGATGTTCACTGC
GCCTGTGGCCATGAAAATTCAACGCCACTGCATGAAGCAGTACATTCCGG
ACAAGTGGATCAGGTGAAGCTACTTTTTGAGCATGGTGGAGTAGACGTGA
GCTTGGAAAACTCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001810 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | Ankyrin repeats (3 copies) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:1686688..1687554 - |
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