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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000010.1:1833290..1834058- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_15000-T1 ID=CAN33_15000-T1|Name=CAN33_15000-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=769bp|location=Sequence derived from alignment at NKJJ01000010.1:1833290..1834058- (Aspergillus niger FDAARGOS_311)
ATGGCCGATCTGGAGCTTACACTTGCCATAGAGAATGGAAACTCTGATGA
GGTCAAGAGACTACTGGACAGTGGCATTCCATTAAGAATCGACCAGTTTC
TAACTGCAGTATTGTCCAAGAATATTGCTATACTCGACAAAATTTTGTCT
AGTGGGTGGGACATAAATAAAAATATCAATGATAATATTCCTTCTGCGTT
AGTGTAAGTTTGATAGCTTTCTTCCAATATGTTAGCATTGGGCTAATAGT
CATTATAGGTATACCTTTGAAGATGAAGAACTCCTCAACTGGTTCCTGAG
ACACGGCGCAAACCCAAACAAACGTTGTCCTATTCGTGACTGTACACCAC
TCTCCTACGCTGTCAAAGGGGCATCATTCAGCGTCATCGAACGTCTTTTC
GAATACGGGGGTCAACTTGTGCACGGGCAGCTTCTACATTACGCGTCGAT
GCGGGAAAAAAACGATGGGTATGAGGTATTGAGTTTCATTTACCATATCG
ATCCTGAATTCAATCGGCTGCGAATCAACAAGTTATTGGATGAAGGATCA
GAGTACTACTTCCGCTACCAACGAAGCGGACTTTGTACCCCTTTGCAGTA
CGCTGCCATCAACGGCTCAGAAACTATGGTGCAATTCCTGCTAGATCGGG
GTGCAGATCCTTGCGGCCTGGATCCTTACCGCCGCACTGCGATTAGTTAT
GCTACTCGCAATAGCCACGACAATGTCACAGGCATGCTCAAAAACTGGAC
GGGTTCAGTGCAGTCTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000010.1:1833290..1834058- >CAN33_15000-T1 ID=CAN33_15000-T1|Name=CAN33_15000-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1428bp|location=Sequence derived from alignment at NKJJ01000010.1:1833290..1834058- (Aspergillus niger FDAARGOS_311)
GTATACCTTTGAAGATGAAGAACTCCTCAACTGGTTCCTGAGACACGGCG
CAAACCCAAACAAACGTTGTCCTATTCGTGACTGTACACCACTCTCCTAC
GCTGTCAAAGGGGCATCATTCAGCGTCATCGAACGTCTTTTCGAATACGG
GGGTCAACTTGTGCACGGGCAGCTTCTACATTACGCGTCGATGCGGGAAA
AAAACGATGGGTATGAGGTATTGAGTTTCATTTACCATATCGATCCTGAA
TTCAATCGGCTGCGAATCAACAAGTTATTGGATGAAGGATCAGAGTACTA
CTTCCGCTACCAACGAAGCGGACTTTGTACCCCTTTGCAGTACGCTGCCA
TCAACGGCTCAGAAACTATGGTGCAATTCCTGCTAGATCGGGGTGCAGAT
CCTTGCGGCCTGGATCCTTACCGCCGCACTGCGATTAGTTATGCTACTCG
CAATAGCCACGACAATGTCACAGGCATGCTCAAAAACTGGACGGGTTCAG
TGCAGTCTTAGATGGCCGATCTGGAGCTTACACTTGCCATAGAGAATGGA
AACTCTGATGAGGTCAAGAGACTACTGGACAGTGGCATTCCATTAAGAAT
CGACCAGTTTCTAACTGCAGTATTGTCCAAGAATATTGCTATACTCGACA
AAATTTTGTCTAGTGGGTGGGACATAAATAAAAATATCAATGATAATATT
CCTTCTGCGTTAGTGTATACCTTTGAAGATGAAGAACTCCTCAACTGGTT
CCTGAGACACGGCGCAAACCCAAACAAACGTTGTCCTATTCGTGACTGTA
CACCACTCTCCTACGCTGTCAAAGGGGCATCATTCAGCGTCATCGAACGT
CTTTTCGAATACGGGGGTCAACTTGTGCACGGGCAGCTTCTACATTACGC
GTCGATGCGGGAAAAAAACGATGGGTATGAGGTATTGAGTTTCATTTACC
ATATCGATCCTGAATTCAATCGGCTGCGAATCAACAAGTTATTGGATGAA
GGATCAGAGTACTACTTCCGCTACCAACGAAGCGGACTTTGTACCCCTTT
GCAGTACGCTGCCATCAACGGCTCAGAAACTATGGTGCAATTCCTGCTAG
ATCGGGGTGCAGATCCTTGCGGCCTGGATCCTTACCGCCGCACTGCGATT
AGTTATGCTACTCGCAATAGCCACGACAATGTCACAGGCATGCTCAAAAA
CTGGACGGGTTCAGTGCAGTCTTAGATGGCCGATCTGGAGCTTACACTTG
CCATAGAGAATGGAAACTCTGATGAGGTCAAGAGACTACTGGACAGTGGC
ATTCCATTAAGAATCGACCAGTTTCTAACTGCAGTATTGTCCAAGAATAT
TGCTATACTCGACAAAATTTTGTCTAGTGGGTGGGACATAAATAAAAATA
TCAATGATAATATTCCTTCTGCGTTAGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | Ankyrin repeats (3 copies) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000010.1 | supercontig | NKJJ01000010.1:1833290..1834058 - |
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