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CAN33_37745-T1, CAN33_37745-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_37745-T1
Unique NameCAN33_37745-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1030714..1032294+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_37745-T1 ID=CAN33_37745-T1|Name=CAN33_37745-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1581bp|location=Sequence derived from alignment at NKJJ01000017.1:1030714..1032294+ (Aspergillus niger FDAARGOS_311)
ATGCGTCGACTGTCGCCCTTGTTACGGCAGCCTTTGCTTTCTCGGAAACC
TCCAATCAGGGGTCGATTGGTCCCTTGGCCATCAGTGAGGGCGCAATGGC
TCTCATCGACGTCGTCCCGGCTCTGCTCGTGCTCTGACCCGCAGCCCGGA
CAGCCTCAGGCTCAATCTTCGACCCCAGCCGATTATCGCGCCCTGGGAAC
CTCCCAGGACCTTTTCACAACCTCAGTCTACAGCCCCGGATCGCCTCTGT
TCCTCCCCAATGGCACCCATATCATCAACAAACTCATCACCTTTCTCCGC
ACGCAGTACCTTCAATATGGTTTTCGCGAAGTCCTGACCCCGACGATCTA
CAAACGCTCCCTCTGGGAAGTCTCCGGCCATTGGCAGAATTACAAAGATG
ATATGTACGAGGTGCGCGGTAGGGGGGCTACTGGAGATACGGACGGAGAA
GCGGGAGAGGATGAGTCCTACGGCCTGAAGCCGATGAACTGCCCCGGCCA
CTGCCTGCTATTCAAATCGCAGACGCATTCTTACCGGGAACTGCCCATCC
GCTACGCCGATTTCAGTCCGCTTCATCGGAATGAGGTTTCGGGTTCGCTA
AGCGGACTTACCCGTGTCCGCCGTTTCCATCAAGACGATGGGCATATTTT
CTGTCGACCGCAGCAGATCAAGGGGGAAATCGCTTCGGCACTTGGATTCG
TGGACTTGGTTATGACAACATTCGGACTGGGACCGTATCGCTTAGTCCTT
TCCACAAGGCCAGAGAAGGACTTCATCGGTAGTTTGGAGTTGTGGAATAG
TGCCGAAGCCCAATTGCGCGAGGCACTCGACAATACAGGCAGGGAATGGG
CCATGAACGAAGGTGACGGAGCATTCTACGGCCCCAAAATCGACATCCAG
CTTCAAGACAAAGCAGGAAAATACCACCAACTCTCCACCATCCAGCTCGA
TATGAATCTCCCTCAGCGATTTGGGCTCGAGTACCAGGTCGCTGAAGGTG
AGGATGATTACAACCCGGAGACCCCAGGCAAGGCGACCCCGGTGATGATC
CATCGGGCAAACTTCGGCTCTCTGGAGCGGTTCTTAGCGCTGCTCATTGA
GGAATACGCTGGTCGCTGGCCGTTCTGGCTTTCTCCGCGCCAGGGTATCG
TCCTAACCGTGAACCAAGATGAGGCTGTCGTACAGCAGGCTCACGAAGCG
GCGGCCAAAATCTCTGGATTCCGCGCCCTTCAGCCCGGCCAAATGGGGAC
TGATGCACCCCAGCCCATCTCCTCGGTTGACTCCACATTCTTGATCGATG
TGGACAGCAGTAGCCAATCGCTGAACAAGAAAATCCAGCGAGCCAAGCAG
ATGAAGTACAACCTCATTTTCATCCTGGGACCCAAGGACGTCGCTGCCTC
TCGCATCACGGTGGACGTGACAGGTCAGCTGCAGAGCAAACCCGAACGTG
GGGTGCAGAAGCTGCAAGACATCCTGACGCAACGATTGGGCGAGAAGGCC
TTGAAGAACCCTCGGGCCATTCCCCTACCCGTAGATGACGTGCACGAACT
TCTGGTGCAGCTGGAGAAGCAATTTGTATAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1030714..1032294+

>CAN33_37745-T1 ID=CAN33_37745-T1|Name=CAN33_37745-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1581bp|location=Sequence derived from alignment at NKJJ01000017.1:1030714..1032294+ (Aspergillus niger FDAARGOS_311)
ATGCGTCGACTGTCGCCCTTGTTACGGCAGCCTTTGCTTTCTCGGAAACC
TCCAATCAGGGGTCGATTGGTCCCTTGGCCATCAGTGAGGGCGCAATGGC
TCTCATCGACGTCGTCCCGGCTCTGCTCGTGCTCTGACCCGCAGCCCGGA
CAGCCTCAGGCTCAATCTTCGACCCCAGCCGATTATCGCGCCCTGGGAAC
CTCCCAGGACCTTTTCACAACCTCAGTCTACAGCCCCGGATCGCCTCTGT
TCCTCCCCAATGGCACCCATATCATCAACAAACTCATCACCTTTCTCCGC
ACGCAGTACCTTCAATATGGTTTTCGCGAAGTCCTGACCCCGACGATCTA
CAAACGCTCCCTCTGGGAAGTCTCCGGCCATTGGCAGAATTACAAAGATG
ATATGTACGAGGTGCGCGGTAGGGGGGCTACTGGAGATACGGACGGAGAA
GCGGGAGAGGATGAGTCCTACGGCCTGAAGCCGATGAACTGCCCCGGCCA
CTGCCTGCTATTCAAATCGCAGACGCATTCTTACCGGGAACTGCCCATCC
GCTACGCCGATTTCAGTCCGCTTCATCGGAATGAGGTTTCGGGTTCGCTA
AGCGGACTTACCCGTGTCCGCCGTTTCCATCAAGACGATGGGCATATTTT
CTGTCGACCGCAGCAGATCAAGGGGGAAATCGCTTCGGCACTTGGATTCG
TGGACTTGGTTATGACAACATTCGGACTGGGACCGTATCGCTTAGTCCTT
TCCACAAGGCCAGAGAAGGACTTCATCGGTAGTTTGGAGTTGTGGAATAG
TGCCGAAGCCCAATTGCGCGAGGCACTCGACAATACAGGCAGGGAATGGG
CCATGAACGAAGGTGACGGAGCATTCTACGGCCCCAAAATCGACATCCAG
CTTCAAGACAAAGCAGGAAAATACCACCAACTCTCCACCATCCAGCTCGA
TATGAATCTCCCTCAGCGATTTGGGCTCGAGTACCAGGTCGCTGAAGGTG
AGGATGATTACAACCCGGAGACCCCAGGCAAGGCGACCCCGGTGATGATC
CATCGGGCAAACTTCGGCTCTCTGGAGCGGTTCTTAGCGCTGCTCATTGA
GGAATACGCTGGTCGCTGGCCGTTCTGGCTTTCTCCGCGCCAGGGTATCG
TCCTAACCGTGAACCAAGATGAGGCTGTCGTACAGCAGGCTCACGAAGCG
GCGGCCAAAATCTCTGGATTCCGCGCCCTTCAGCCCGGCCAAATGGGGAC
TGATGCACCCCAGCCCATCTCCTCGGTTGACTCCACATTCTTGATCGATG
TGGACAGCAGTAGCCAATCGCTGAACAAGAAAATCCAGCGAGCCAAGCAG
ATGAAGTACAACCTCATTTTCATCCTGGGACCCAAGGACGTCGCTGCCTC
TCGCATCACGGTGGACGTGACAGGTCAGCTGCAGAGCAAACCCGAACGTG
GGGTGCAGAAGCTGCAAGACATCCTGACGCAACGATTGGGCGAGAAGGCC
TTGAAGAACCCTCGGGCCATTCCCCTACCCGTAGATGACGTGCACGAACT
TCTGGTGCAGCTGGAGAAGCAATTTGTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0004829threonine-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006435threonyl-tRNA aminoacylation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_37745CAN33_37745Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37745-T1.exon1CAN33_37745-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37745-T1.cdsCAN33_37745-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37745-T1CAN33_37745-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR033728
DBxrefInterPro:IPR006195
DBxrefInterPro:IPR004154
DBxrefInterPro:IPR036621
DBxrefInterPro:IPR002314
DBxrefInterPro:IPR002320
DBxrefPFAM:PF00587
DBxrefPFAM:PF03129
Productthreonine--tRNA ligase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1030714..1032294 +
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