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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2457542..2458226+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_40120-T1 ID=CAN33_40120-T1|Name=CAN33_40120-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=685bp|location=Sequence derived from alignment at NKJJ01000017.1:2457542..2458226+ (Aspergillus niger FDAARGOS_311)
ATGGCGAGTACGTGACACCCCTTTTGCTCCAAAATCCTCGAAACCCCGTT
ATTTTCGTTTTCCCGTCTCTCATGGGCGGGGAATGCGATTATCGACCATT
GCAAATCGAAGAGTTATGTATCGCTGACATGAATTCCCACAGAGTCCAAG
AACGCGTCTCAGCACCACAACAGCCAGAAGGCTCACCGTAACGGGTGCGT
ATTATAAGCCGATTATCCTCCTACCTCTTTATTTGTTCCAAGAATGCCAC
ACGAAACGCCAGAGGACGAATACTGCGATGTTGGATAGAGGACGATATCT
TCGACAGATTTGAGGCTCAGAGAACGGATAAGGAAGAAGAGGATACTCAA
TGAGGGAGGATATCGACCAATATCCAGCATTCAGCATATTCGTCCTCGGA
ATCAATACAACAACTACAACGAACGCGGGAGAGAGATCGGAACACTGACC
ATCGCCTTTTGAAATCAACAGTATCAAGAAGCCCAAGACCCACCGTTACC
CCTCCCTCAAGGGTGTCGACCCCAAGTTCCGCCGCAACCACAGACACGCC
CTTCACGGAACCGCTAAGGCTCTGGTACGTTTTGTGACCGATCCAACAAG
AAACTCTTGTTGGCCAAGCCAAAAGGAATCGACACTAACAACCCTAAAGA
AGGAGCGCAAGGAGGGCAAGCGCGAGATCGCATAA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2457542..2458226+ >CAN33_40120-T1 ID=CAN33_40120-T1|Name=CAN33_40120-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=792bp|location=Sequence derived from alignment at NKJJ01000017.1:2457542..2458226+ (Aspergillus niger FDAARGOS_311)
ATGGCGAAGTCCAAGAACGCGTCTCAGCACCACAACAGCCAGAAGGCTCA
CCGTAACGGTATCAAGAAGCCCAAGACCCACCGTTACCCCTCCCTCAAGG
GTGTCGACCCCAAGTTCCGCCGCAACCACAGACACGCCCTTCACGGAACC
GCTAAGGCTCTGAAGGAGCGCAAGGAGGGCAAGCGCGAGATCGCATAAAT
GGCGAAGTCCAAGAACGCGTCTCAGCACCACAACAGCCAGAAGGCTCACC
GTAACGGTATCAAGAAGCCCAAGACCCACCGTTACCCCTCCCTCAAGGGT
GTCGACCCCAAGTTCCGCCGCAACCACAGACACGCCCTTCACGGAACCGC
TAAGGCTCTGAAGGAGCGCAAGGAGGGCAAGCGCGAGATCGCATAAATGG
CGAAGTCCAAGAACGCGTCTCAGCACCACAACAGCCAGAAGGCTCACCGT
AACGGTATCAAGAAGCCCAAGACCCACCGTTACCCCTCCCTCAAGGGTGT
CGACCCCAAGTTCCGCCGCAACCACAGACACGCCCTTCACGGAACCGCTA
AGGCTCTGAAGGAGCGCAAGGAGGGCAAGCGCGAGATCGCATAAATGGCG
AAGTCCAAGAACGCGTCTCAGCACCACAACAGCCAGAAGGCTCACCGTAA
CGGTATCAAGAAGCCCAAGACCCACCGTTACCCCTCCCTCAAGGGTGTCG
ACCCCAAGTTCCGCCGCAACCACAGACACGCCCTTCACGGAACCGCTAAG
GCTCTGAAGGAGCGCAAGGAGGGCAAGCGCGAGATCGCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002673 |
| DBxref | PFAM:PF01779 |
| Product | 60S ribosomal protein L29 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2457542..2458226 + |
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