You are here

Home

CAN33_4840-T1, CAN33_4840-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4840-T1
Unique NameCAN33_4840-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:670180..671115+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4840-T1 ID=CAN33_4840-T1|Name=CAN33_4840-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=936bp|location=Sequence derived from alignment at NKJJ01000019.1:670180..671115+ (Aspergillus niger FDAARGOS_311)
ATGCTCGGGCCCTTTTCTGCCAATATATCTCAGCAGACAATTGTTCTAGG
CGTGACGGCCACAAGTCCGCAGAAGCGGTCTCCCTCACCAGATCGCTTGC
TGGGCAATTCTAGTCTTCCTCTAGTCATGTCGGCCTGGAGCGCACCTTTT
GGTGGGTCGCCGTCCTCAGTAGCAGAGAAGCTTGTTGAAAGACGCTTTGG
ACCCCAGGATCGTCTAGGCTTGAGGATATGGGAAGAGACTGGGAACAGTA
TCGCTCGGCATATCTGGTAAGGCTTTCTTATTGGAAACGAGGCTCTCTTC
TTCCTTGTACGAGGCTTACATATCTCCAGGGATGCGGCGGTGGCTTCGGT
CGTATACCTTCAGCAGATAGTGGCAGGAGATCCTGCGGTCTCTGTGCCAT
TATTGCAGGGCCTTCTTCGGGGCGAACGCAACACTCCTCTCCATGTTCTC
GAACTAGGATCAGGATGTGGCGTTGTAGGAATTGCTCTTGCTGAGCTTCT
CCCTCATTGTTCTGTAGTACTCACAGATCTGCCTGAGGTGGAGGAAATTG
TGACACAGAACATAGCTGTTGCGAAGCCGGCCGATTCCTCTGAGCTCGAG
TTCAGCACCCTTGACTGGGATGAGGAACTTCCGAGTGACTTGTGTGGTGG
TTCGGTAGATCTGGTCCTCGTTTCAGATTGTACTTATAATGCAGACAGCT
TGCCTGCGCTAGTCTCAGTACTAAGCCGATTAGTGCAAATGTCGCCTGAG
GCTGTCATCTTGGTGGCATTGAAGAGACGTCATGAAAGCGAGTCTATTTT
CTTCGATCTGATGCAGTCTGCTGGGCTCCATAATTTGCACCTAGATCGGA
AGCAGCTCCCATCGCAACACGGTCAATTTGACGACATTGAATTGCGTTGT
TACGGCAGAGAAAGGGGTATATCATCAAGTCAATAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:670180..671115+

>CAN33_4840-T1 ID=CAN33_4840-T1|Name=CAN33_4840-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2457bp|location=Sequence derived from alignment at NKJJ01000019.1:670180..671115+ (Aspergillus niger FDAARGOS_311)
ATGCTCGGGCCCTTTTCTGCCAATATATCTCAGCAGACAATTGTTCTAGG
CGTGACGGCCACAAGTCCGCAGAAGCGGTCTCCCTCACCAGATCGCTTGC
TGGGCAATTCTAGTCTTCCTCTAGTCATGTCGGCCTGGAGCGCACCTTTT
GGTGGGTCGCCGTCCTCAGTAGCAGAGAAGCTTGTTGAAAGACGCTTTGG
ACCCCAGGATCGTCTAGGCTTGAGGATATGGGAAGAGACTGGGAACAGTA
TCGCTCGGCATATCTGGGATGCGGCGGTGGCTTCGGTCGTATACCTTCAG
CAGATAGTGGCAGGAGATCCTGCGGTCTCTGTGCCATTATTGCAGGGCCT
TCTTCGGGGCGAACGCAACACTCCTCTCCATGTTCTCGAACTAGGATCAG
GATGTGGCGTTGTAGGAATTGCTCTTGCTGAGCTTCTCCCTCATTGTTCT
GTAGTACTCACAGATCTGCCTGAGGTGGAGGAAATTGTGACACAGAACAT
AGCTGTTGCGAAGCCGGCCGATTCCTCTGAGCTCGAGTTCAGCACCCTTG
ACTGGGATGAGGAACTTCCGAGTGACTTGTGTGGTGGTTCGGTAGATCTG
GTCCTCGTTTCAGATTTGCAAATGTCGCCTGAGGCTGTCATCTTGGTGGC
ATTGAAGAGACGTCATGAAAGCGAGTCTATTTTCTTCGATCTGATGCAGT
CTGCTGGGCTCCATAATTTGCACCTAGATCGGAAGCAGCTCCCATCGCAA
CACGGTCAATTTGACGACATTGAATTGCGTTGTTACGGCAGAGAAAGGGG
TATATCATCAAGTCAATAGATGCTCGGGCCCTTTTCTGCCAATATATCTC
AGCAGACAATTGTTCTAGGCGTGACGGCCACAAGTCCGCAGAAGCGGTCT
CCCTCACCAGATCGCTTGCTGGGCAATTCTAGTCTTCCTCTAGTCATGTC
GGCCTGGAGCGCACCTTTTGGTGGGTCGCCGTCCTCAGTAGCAGAGAAGC
TTGTTGAAAGACGCTTTGGACCCCAGGATCGTCTAGGCTTGAGGATATGG
GAAGAGACTGGGAACAGTATCGCTCGGCATATCTGGGATGCGGCGGTGGC
TTCGGTCGTATACCTTCAGCAGATAGTGGCAGGAGATCCTGCGGTCTCTG
TGCCATTATTGCAGGGCCTTCTTCGGGGCGAACGCAACACTCCTCTCCAT
GTTCTCGAACTAGGATCAGGATGTGGCGTTGTAGGAATTGCTCTTGCTGA
GCTTCTCCCTCATTGTTCTGTAGTACTCACAGATCTGCCTGAGGTGGAGG
AAATTGTGACACAGAACATAGCTGTTGCGAAGCCGGCCGATTCCTCTGAG
CTCGAGTTCAGCACCCTTGACTGGGATGAGGAACTTCCGAGTGACTTGTG
TGGTGGTTCGGTAGATCTGGTCCTCGTTTCAGATTTGCAAATGTCGCCTG
AGGCTGTCATCTTGGTGGCATTGAAGAGACGTCATGAAAGCGAGTCTATT
TTCTTCGATCTGATGCAGTCTGCTGGGCTCCATAATTTGCACCTAGATCG
GAAGCAGCTCCCATCGCAACACGGTCAATTTGACGACATTGAATTGCGTT
GTTACGGCAGAGAAAGGGGTATATCATCAAGTCAATAGATGCTCGGGCCC
TTTTCTGCCAATATATCTCAGCAGACAATTGTTCTAGGCGTGACGGCCAC
AAGTCCGCAGAAGCGGTCTCCCTCACCAGATCGCTTGCTGGGCAATTCTA
GTCTTCCTCTAGTCATGTCGGCCTGGAGCGCACCTTTTGGTGGGTCGCCG
TCCTCAGTAGCAGAGAAGCTTGTTGAAAGACGCTTTGGACCCCAGGATCG
TCTAGGCTTGAGGATATGGGAAGAGACTGGGAACAGTATCGCTCGGCATA
TCTGGGATGCGGCGGTGGCTTCGGTCGTATACCTTCAGCAGATAGTGGCA
GGAGATCCTGCGGTCTCTGTGCCATTATTGCAGGGCCTTCTTCGGGGCGA
ACGCAACACTCCTCTCCATGTTCTCGAACTAGGATCAGGATGTGGCGTTG
TAGGAATTGCTCTTGCTGAGCTTCTCCCTCATTGTTCTGTAGTACTCACA
GATCTGCCTGAGGTGGAGGAAATTGTGACACAGAACATAGCTGTTGCGAA
GCCGGCCGATTCCTCTGAGCTCGAGTTCAGCACCCTTGACTGGGATGAGG
AACTTCCGAGTGACTTGTGTGGTGGTTCGGTAGATCTGGTCCTCGTTTCA
GATTTGCAAATGTCGCCTGAGGCTGTCATCTTGGTGGCATTGAAGAGACG
TCATGAAAGCGAGTCTATTTTCTTCGATCTGATGCAGTCTGCTGGGCTCC
ATAATTTGCACCTAGATCGGAAGCAGCTCCCATCGCAACACGGTCAATTT
GACGACATTGAATTGCGTTGTTACGGCAGAGAAAGGGGTATATCATCAAG
TCAATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_4840CAN33_4840Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4840-T1.exon1CAN33_4840-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_4840-T1.exon2CAN33_4840-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4840-T1.exon3CAN33_4840-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4840-T1.cdsCAN33_4840-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4840-T1CAN33_4840-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR019410
DBxrefPFAM:PF10294
Productputative methyltransferase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:670180..671115 +
Powered by Drupal