You are here

Home

CAN33_5415-T1, CAN33_5415-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_5415-T1
Unique NameCAN33_5415-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:1006471..1008279+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_5415-T1 ID=CAN33_5415-T1|Name=CAN33_5415-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1809bp|location=Sequence derived from alignment at NKJJ01000019.1:1006471..1008279+ (Aspergillus niger FDAARGOS_311)
ATGGGTGTCCCAAACAACAGTCTGCATGAGTTGGAGCGCCAGCGCCTCGA
ACTCGAGGGAAACATCTCGAAGCTGCAAGACTCCCTTTACCACTGGAGGA
CGTGGGAGGCCGAATACGATGGCCTCAAAGACGAGTTAAACGAGCTGGAC
GATGATGCGACTATGGATGACTACCTCAGAGTAGGACGCGACTTTGGTGG
CTCCTTGGTCAATGAAGCGGAGGTCAAAGTGATATTGGGAGAGAAACAAG
GCGTGACACGAACCAAGCAACAGGCGGTTGATCTGGTAACGAGGCGGATC
GACTACGTGAAGCAGAATGCGTCTACGATAGAGAAACGGCTACGTGCGGC
AGAAGACCAACTGTATGCGCTCGACTCGCAAGATCGGCTACCGGTGGAAC
CTACGGCGGACTTTCCTATGACTGAGATTTTCGAAGAACTCGATGAGAAC
GGCGAAGTTATTTCAAGCAAAACAACCACACCCGGCAGCGAGGCAACGGA
TCTATTGGAGGTCTTGAAGAAGGCCGGTGTCAATGATATACCCGATGTGG
CTAAGGCCGATACGCCAGTATCGAGCTCGTCTCAGCAAGTCACTCAGCCT
ACGGAGGAGGCATCTTTCGCAGATAGTCTCAAGAAGGACGACACATCCGC
CAGCGAAGAGCACCCCGTCAAATCCTCGGGAAGCGAAGCCAAGGAGACAA
GCTCAGAGTTAGACCCGACCGTCGAAGTTCATGGCGAGCGTCCTGTTATG
GAAGTCGACGAGTCTCCGGAGGATGCTAAATTACGCCGTGAGATGCTCCA
ATATAGCTTGAACGAAGTCGGGTCTGTCGTGGCGGAGCTTGAATTGGATG
AAGACGCAAGTGATATCTCTGTTGACGAGGACTATGATGCTTATGATTAT
GATGATGACGAAGATGAAGAGGAAGACGAATACGGAAGGAGCACTAGGCG
AGTTTTGAGCGAAGACTATCACCGTCAGATGCGCGAGCTGGAGGAAAAGC
TCAACGCTCGGGGAATGTGGAATGCCGGAAAAGACACGCAATCGCTTCCA
AATGAGATCAAGCAGGACCTAGATCAGCCCAGTGTTGTTCGTGTCGAGAA
TAACACAGACGCGAGTAGCGAGCCAGTCAAAGAGAAGAAACCGAAGAAGA
AGGTTGCTTTTGCTGACGAACTCGACATCGCTCCGGCTTCCAAGCCTCCG
ACCTTGGAGAAGAAGATCGCTCCGGTCCGAGAGTCAAACGTACCTGTTCT
CCAGGATGCTGTTGTTGAACGCACAGAGCCTGCTGGAAAACAACCTGTGC
AGAATGACGCCCCGAAGAAAGTATCCCGGTTCAAGAGTGCCCGGAAAACT
CACAACGCAGCTGAAGACGCCACTGCGTCAACAACCCAATCTAGCAACAC
TTCTCGACCTGCCGAACCTCGCTCGGCTCTACGCAAGTCTGAGGCATCTA
CCACTGGATCATCTCTACCTCTGTTCCCTGCCAAACCAGCGGAACCCAAG
CCCTTCTCCCAGCCTATCACCGACATCGTGGAGAAAGAAGACCCTACACC
CAGGGGTCCCGAAGGGAAGGTCCTTGCTGACACACTCGTTGAACGGGAGA
CTCCAGCAGGTCCAGCAGTAGCGCCAGAGCCCGATGAGCTCGACGAGCAG
CTGCATAAGAAGGAGATTGCAACAGAGTTCTACAAGATCCGGAACCGAAT
GATCCAGCAAAATGGCGGCTTCGTAGGCGAGGAGCCGGAAATCGTGCCGA
TTGAGACCGAGGATGCGCCCAAACGTGTGAGCAGATTCAGGGCCGCCCGC
ATGAGGTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:1006471..1008279+

>CAN33_5415-T1 ID=CAN33_5415-T1|Name=CAN33_5415-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3408bp|location=Sequence derived from alignment at NKJJ01000019.1:1006471..1008279+ (Aspergillus niger FDAARGOS_311)
ATGGGTGTCCCAAACAACAGTCTGCATGAGTTGGAGCGCCAGCGCCTCGA
ACTCGAGGGAAACATCTCGAAGCTGCAAGACTCCCTTTACCACTGGAGGA
CGTGGGAGGCCGAATACGATGGCCTCAAAGACGAGTTAAACGAGCTGGAC
GATGATGCGACTATGGATGACTACCTCAGAGTAGGACGCGACTTTGGTGG
CTCCTTGGTCAATGAAGCGGAGGTCAAAGTGATATTGGGAGAGAAACAAG
GCGTGACACGAACCAAGCAACAGGCGGTTGATCTGGTAACGAGGCGGATC
GACTACGTGAAGCAGAATGCGTCTACGATAGAGAAACGGCTACGTGCGGC
AGAAGACCAACTGTATGCGCTCGACTCGCAAGATCGGCTACCGGTGGAAC
CTACGGCGGACTTTCCTATGACTGAGATTTTCGAAGAACTCGATGAGAAC
GGCGAAGTTATTTCAAGCAAAACAACCACACCCGGCAGCGAGGCAACGGA
TCTATTGGAGGTCTTGAAGAAGGCCGGTGTCAATGATATACCCGATGTGG
CTAAGGCCGATACGCCAGTATCGAGCTCGTCTCAGCAAGTCACTCAGCCT
ACGGAGGAGGCATCTTTCGCAGATAGTCTCAAGAAGGACGACACATCCGC
CAGCGAAGAGCACCCCGTCAAATCCTCGGGAAGCGAAGCCAAGGAGACAA
GCTCAGAGTTAGACCCGACCGTCGAAGTTCATGGCGAGCGTCCTGTTATG
GAAGTCGACGAGTCTCCGGAGGATGCTAAATTACGCCGTGAGATGCTCCA
ATATAGCTTGAACGAAGTCGGGTCTGTCGTGGCGGAGCTTGAATTGGATG
AAGACGCAAACTATCACCGTCAGATGCGCGAGCTGGAGGAAAAGCTCAAC
GCTCGGGGAATGTGGAATGCCGGAAAAGACACGCAATCGCTTCCAAATGA
GATCAAGCAGGACCTAGATCAGCCCAGTGTTGTTCGTGTCGAGAATAACA
CAGACGCGAGTAGCGAGCCAGTCAAAGAGAAGAAACCGAAGAAGAAGGTT
GCTTTTGCTGACGAACTCGACATCGCTCCGGCTTCCAAGCCTCCGACCTT
GGAGAAGAAGATCGCTCCGGTCCGAGAGTCAAACGTACCTGTTCTCCAGG
ATGCTGTTGTTGAACGCACAGAGCCTGCTGGAAAACAACCTGTGCAGAAT
GACGCCCCGAAGAAAGTATCCCGGTTCAAGAGTGCCCGGAAAACTCACAA
CGCAGCTGAAGACGCCACTGCGTCAACAACCCAATCTAGCAACACTTCTC
GACCTGCCGAACCTCGCTCGGCTCTACGCAAGTCTGAGGCATCTACCACT
GGATCATCTCTACCTCTGTTCCCTGCCAAACCAGCGGAACCCAAGCCCTT
CTCCCAGCCTATCACCGACATCGTGGAGAAAGAAGACCCTACACCCAGGG
GTCCCGAAGGGAAGGTCCTTGCTGACACACTCGTTGAACGGGAGACTCCA
GCAGGTCCAGCAGTAGCGCCAGAGCCCGATGAGCTCGACGAGCAGCTGCA
TAAGAAGGAGATTGCAACAGAGTTCTACAAGATCCGGAACCGAATGATCC
AGCAAAATGGCGGCTTCGTAGGCGAGGAGCCGGAAATCGTGCCGATTGAG
ACCGAGGATGCGCCCAAACGTGTGAGCAGATTCAGGGCCGCCCGCATGAG
GTAGATGGGTGTCCCAAACAACAGTCTGCATGAGTTGGAGCGCCAGCGCC
TCGAACTCGAGGGAAACATCTCGAAGCTGCAAGACTCCCTTTACCACTGG
AGGACGTGGGAGGCCGAATACGATGGCCTCAAAGACGAGTTAAACGAGCT
GGACGATGATGCGACTATGGATGACTACCTCAGAGTAGGACGCGACTTTG
GTGGCTCCTTGGTCAATGAAGCGGAGGTCAAAGTGATATTGGGAGAGAAA
CAAGGCGTGACACGAACCAAGCAACAGGCGGTTGATCTGGTAACGAGGCG
GATCGACTACGTGAAGCAGAATGCGTCTACGATAGAGAAACGGCTACGTG
CGGCAGAAGACCAACTGTATGCGCTCGACTCGCAAGATCGGCTACCGGTG
GAACCTACGGCGGACTTTCCTATGACTGAGATTTTCGAAGAACTCGATGA
GAACGGCGAAGTTATTTCAAGCAAAACAACCACACCCGGCAGCGAGGCAA
CGGATCTATTGGAGGTCTTGAAGAAGGCCGGTGTCAATGATATACCCGAT
GTGGCTAAGGCCGATACGCCAGTATCGAGCTCGTCTCAGCAAGTCACTCA
GCCTACGGAGGAGGCATCTTTCGCAGATAGTCTCAAGAAGGACGACACAT
CCGCCAGCGAAGAGCACCCCGTCAAATCCTCGGGAAGCGAAGCCAAGGAG
ACAAGCTCAGAGTTAGACCCGACCGTCGAAGTTCATGGCGAGCGTCCTGT
TATGGAAGTCGACGAGTCTCCGGAGGATGCTAAATTACGCCGTGAGATGC
TCCAATATAGCTTGAACGAAGTCGGGTCTGTCGTGGCGGAGCTTGAATTG
GATGAAGACGCAAACTATCACCGTCAGATGCGCGAGCTGGAGGAAAAGCT
CAACGCTCGGGGAATGTGGAATGCCGGAAAAGACACGCAATCGCTTCCAA
ATGAGATCAAGCAGGACCTAGATCAGCCCAGTGTTGTTCGTGTCGAGAAT
AACACAGACGCGAGTAGCGAGCCAGTCAAAGAGAAGAAACCGAAGAAGAA
GGTTGCTTTTGCTGACGAACTCGACATCGCTCCGGCTTCCAAGCCTCCGA
CCTTGGAGAAGAAGATCGCTCCGGTCCGAGAGTCAAACGTACCTGTTCTC
CAGGATGCTGTTGTTGAACGCACAGAGCCTGCTGGAAAACAACCTGTGCA
GAATGACGCCCCGAAGAAAGTATCCCGGTTCAAGAGTGCCCGGAAAACTC
ACAACGCAGCTGAAGACGCCACTGCGTCAACAACCCAATCTAGCAACACT
TCTCGACCTGCCGAACCTCGCTCGGCTCTACGCAAGTCTGAGGCATCTAC
CACTGGATCATCTCTACCTCTGTTCCCTGCCAAACCAGCGGAACCCAAGC
CCTTCTCCCAGCCTATCACCGACATCGTGGAGAAAGAAGACCCTACACCC
AGGGGTCCCGAAGGGAAGGTCCTTGCTGACACACTCGTTGAACGGGAGAC
TCCAGCAGGTCCAGCAGTAGCGCCAGAGCCCGATGAGCTCGACGAGCAGC
TGCATAAGAAGGAGATTGCAACAGAGTTCTACAAGATCCGGAACCGAATG
ATCCAGCAAAATGGCGGCTTCGTAGGCGAGGAGCCGGAAATCGTGCCGAT
TGAGACCGAGGATGCGCCCAAACGTGTGAGCAGATTCAGGGCCGCCCGCA
TGAGGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_5415CAN33_5415Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5415-T1.exon1CAN33_5415-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_5415-T1.exon2CAN33_5415-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5415-T1.cdsCAN33_5415-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_5415-T1CAN33_5415-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR039553
DBxrefInterPro:IPR024325
DBxrefPFAM:PF13758
ProductPrefoldin subunit family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:1006471..1008279 +
Powered by Drupal