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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000020.1:272526..273680- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_50505-T1 ID=CAN33_50505-T1|Name=CAN33_50505-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1155bp|location=Sequence derived from alignment at NKJJ01000020.1:272526..273680- (Aspergillus niger FDAARGOS_311)
ATGTCCACCAACGATGTGAAGGCCTCACCGGAGGCACTCATCTCGAAATT
CGAGGTGAGCAGACTCCTCAAACAAGGCAAGCAACCCAACCATCCAGCCA
ACCAGCCCCTCTATCACCCCTCCCTACACATTCAGACAAGACCGCTCCAG
CAACACAACAACACTAACTCAAGCCCACAGACCAAAGCGGCCGCCGCATC
GCCATTCTGGGCACCATCGACGGCCAACAAGGCATTTTAATTGCTGAACG
CGCCGCCTTTGCGACCGAAACCCCCGAAGCCCTACAAGCCTTCCACGCCG
CCATCACCGATGTCAACAACCTCGGCGACAACGACATCTACCGATGGTAC
CTAGCCTCTTCGCACTCAGCACCAGGAAGCCAACAACCCCCGGACCTCAA
GATAAACCTCATCTGGCCCTGCACTGAGTCGCACATCAAGAAGTACTCCG
AGCAAGTTGTTCGCATGGTCACCGAGACACCGGAGATATACCGCGACTCT
ATTCGTCCGTACATGAGCGCGAAGCGCGAGGAAGGGCGACTGAATTGGGT
ATTTAATATTCTTGAGGGTCGGACGGAGCAAGAGGACGTGATTCTTCGGG
ACAAGGGACATGATGGGAATGAAGAGGGAGGGTTCTTGGTGTTGCCGGAT
TTGAACTGGGATCGGAAGACGATGGGATCGTTGCATTTGCTAGCGCTGGT
TATGAGGAGGGATATTTGGTCCTTGAGGGATCTAAAGAAGAAACATATCC
CTTGGTTGAAGTATCTGAGGGAGAGGCTGTTGGAGGAGACGGTTAGGGTG
TATCCCCAGTTGGAGACGGATCAGTTGAAACTTTATGTGCACTGTAAGTC
TCCCTTTCTGGCGCTATGGGTTTGGGGGTATTTGGTTACTGATTTGGATG
TGTCGTATAGATCAACCGACGTATTATCATTTCCATGTGCACATTGTGAA
CGTCATGCTCGAGGCGGGTGCAACTCAGGCGACTGGAAAGGCGTTCGGAT
TGGAGAACATCATCTCGCAGTTGGAGACACTGGATGGAGACGAAGAGGCT
GGAATGGCGGATGTCAGCTTAACTTATTTCCTGGGTGAAGCCAGTGAACT
CTGGTCGAATGTGTTCGGGCCACTGAAGCGGGGAGAGAAGCCGCTGCCGA
ACTGA back to topCoding sequence (CDS) from alignment at NKJJ01000020.1:272526..273680- >CAN33_50505-T1 ID=CAN33_50505-T1|Name=CAN33_50505-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2907bp|location=Sequence derived from alignment at NKJJ01000020.1:272526..273680- (Aspergillus niger FDAARGOS_311)
ATCAACCGACGTATTATCATTTCCATGTGCACATTGTGAACGTCATGCTC
GAGGCGGGTGCAACTCAGGCGACTGGAAAGGCGTTCGGATTGGAGAACAT
CATCTCGCAGTTGGAGACACTGGATGGAGACGAAGAGGCTGGAATGGCGG
ATGTCAGCTTAACTTATTTCCTGGGTGAAGCCAGTGAACTCTGGTCGAAT
GTGTTCGGGCCACTGAAGCGGGGAGAGAAGCCGCTGCCGAACTGACCCAC
AGACCAAAGCGGCCGCCGCATCGCCATTCTGGGCACCATCGACGGCCAAC
AAGGCATTTTAATTGCTGAACGCGCCGCCTTTGCGACCGAAACCCCCGAA
GCCCTACAAGCCTTCCACGCCGCCATCACCGATGTCAACAACCTCGGCGA
CAACGACATCTACCGATGGTACCTAGCCTCTTCGCACTCAGCACCAGGAA
GCCAACAACCCCCGGACCTCAAGATAAACCTCATCTGGCCCTGCACTGAG
TCGCACATCAAGAAGTACTCCGAGCAAGTTGTTCGCATGGTCACCGAGAC
ACCGGAGATATACCGCGACTCTATTCGTCCGTACATGAGCGCGAAGCGCG
AGGAAGGGCGACTGAATTGGGTATTTAATATTCTTGAGGGTCGGACGGAG
CAAGAGGACGTGATTCTTCGGGACAAGGGACATGATGGGAATGAAGAGGG
AGGGTTCTTGGTGTTGCCGGATTTGAACTGGGATCGGAAGACGATGGGAT
CGTTGCATTTGCTAGCGCTGGTTATGAGGAGGGATATTTGGTCCTTGAGG
GATCTAAAGAAGAAACATATCCCTTGGTTGAAGTATCTGAGGGAGAGGCT
GTTGGAGGAGACGGTTAGGGTGTATCCCCAGTTGGAGACGGATCAGTTGA
AACTTTATGTGCACTATGTCCACCAACGATGTGAAGGCCTCACCGGAGGC
ACTCATCTCGAAATTCGAGATCAACCGACGTATTATCATTTCCATGTGCA
CATTGTGAACGTCATGCTCGAGGCGGGTGCAACTCAGGCGACTGGAAAGG
CGTTCGGATTGGAGAACATCATCTCGCAGTTGGAGACACTGGATGGAGAC
GAAGAGGCTGGAATGGCGGATGTCAGCTTAACTTATTTCCTGGGTGAAGC
CAGTGAACTCTGGTCGAATGTGTTCGGGCCACTGAAGCGGGGAGAGAAGC
CGCTGCCGAACTGACCCACAGACCAAAGCGGCCGCCGCATCGCCATTCTG
GGCACCATCGACGGCCAACAAGGCATTTTAATTGCTGAACGCGCCGCCTT
TGCGACCGAAACCCCCGAAGCCCTACAAGCCTTCCACGCCGCCATCACCG
ATGTCAACAACCTCGGCGACAACGACATCTACCGATGGTACCTAGCCTCT
TCGCACTCAGCACCAGGAAGCCAACAACCCCCGGACCTCAAGATAAACCT
CATCTGGCCCTGCACTGAGTCGCACATCAAGAAGTACTCCGAGCAAGTTG
TTCGCATGGTCACCGAGACACCGGAGATATACCGCGACTCTATTCGTCCG
TACATGAGCGCGAAGCGCGAGGAAGGGCGACTGAATTGGGTATTTAATAT
TCTTGAGGGTCGGACGGAGCAAGAGGACGTGATTCTTCGGGACAAGGGAC
ATGATGGGAATGAAGAGGGAGGGTTCTTGGTGTTGCCGGATTTGAACTGG
GATCGGAAGACGATGGGATCGTTGCATTTGCTAGCGCTGGTTATGAGGAG
GGATATTTGGTCCTTGAGGGATCTAAAGAAGAAACATATCCCTTGGTTGA
AGTATCTGAGGGAGAGGCTGTTGGAGGAGACGGTTAGGGTGTATCCCCAG
TTGGAGACGGATCAGTTGAAACTTTATGTGCACTATGTCCACCAACGATG
TGAAGGCCTCACCGGAGGCACTCATCTCGAAATTCGAGATCAACCGACGT
ATTATCATTTCCATGTGCACATTGTGAACGTCATGCTCGAGGCGGGTGCA
ACTCAGGCGACTGGAAAGGCGTTCGGATTGGAGAACATCATCTCGCAGTT
GGAGACACTGGATGGAGACGAAGAGGCTGGAATGGCGGATGTCAGCTTAA
CTTATTTCCTGGGTGAAGCCAGTGAACTCTGGTCGAATGTGTTCGGGCCA
CTGAAGCGGGGAGAGAAGCCGCTGCCGAACTGACCCACAGACCAAAGCGG
CCGCCGCATCGCCATTCTGGGCACCATCGACGGCCAACAAGGCATTTTAA
TTGCTGAACGCGCCGCCTTTGCGACCGAAACCCCCGAAGCCCTACAAGCC
TTCCACGCCGCCATCACCGATGTCAACAACCTCGGCGACAACGACATCTA
CCGATGGTACCTAGCCTCTTCGCACTCAGCACCAGGAAGCCAACAACCCC
CGGACCTCAAGATAAACCTCATCTGGCCCTGCACTGAGTCGCACATCAAG
AAGTACTCCGAGCAAGTTGTTCGCATGGTCACCGAGACACCGGAGATATA
CCGCGACTCTATTCGTCCGTACATGAGCGCGAAGCGCGAGGAAGGGCGAC
TGAATTGGGTATTTAATATTCTTGAGGGTCGGACGGAGCAAGAGGACGTG
ATTCTTCGGGACAAGGGACATGATGGGAATGAAGAGGGAGGGTTCTTGGT
GTTGCCGGATTTGAACTGGGATCGGAAGACGATGGGATCGTTGCATTTGC
TAGCGCTGGTTATGAGGAGGGATATTTGGTCCTTGAGGGATCTAAAGAAG
AAACATATCCCTTGGTTGAAGTATCTGAGGGAGAGGCTGTTGGAGGAGAC
GGTTAGGGTGTATCCCCAGTTGGAGACGGATCAGTTGAAACTTTATGTGC
ACTATGTCCACCAACGATGTGAAGGCCTCACCGGAGGCACTCATCTCGAA
ATTCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011145 |
| DBxref | InterPro:IPR008594 |
| DBxref | InterPro:IPR036265 |
| DBxref | PFAM:PF11969 |
| DBxref | PFAM:PF05652 |
| Product | Scavenger mRNA decapping enzyme C-term binding family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000020.1 | supercontig | NKJJ01000020.1:272526..273680 - |
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