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CAN33_50890-T1, CAN33_50890-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_50890-T1
Unique NameCAN33_50890-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:489526..490696-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_50890-T1 ID=CAN33_50890-T1|Name=CAN33_50890-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1171bp|location=Sequence derived from alignment at NKJJ01000020.1:489526..490696- (Aspergillus niger FDAARGOS_311)
ATGACTATTGTCCGTCAGACCGAACACCCAGTGGAGGTCCATGATACCGG
CCTCCCACAGAACAACTGGAGTACACCTGGTCGAGCCGCATACGACTTCC
GGTCTGATTTCGTTACCTCCCCGAATATGAGCATGCTCGAATCCATCGTC
AACACAACACTTCTCGACGATGAGATGATGGAGGATCCAACCACTAACTA
TTTCCAGGAGTGGATGGCTCAGTTGACAGGCCATGAAAGGGCGCTCCTTA
CTTATTCGGGAACTATGAGCAACCAGGTGGCACTCCGGACGGCTCTCACC
ACCCCACCATACTCCATCCTTGCAGACCATCGCAGCCATATTCTGAACAT
GGAGGCAGGTGGGGCAGCGACTGTTTGTGGCGCTCTAATTCACGGTGTCA
TCCCAGCAAATGGCCATCATTTGACGCTGGAAGACATCAAGAAGCACTTT
GTTTTCAAGAAAGATATCTGTGAGTGATATGACGTGTTGATTTACTTGTG
CTAATACTGCGTGCATAGATGACTGCCCCACTCGCGTTATAAGCCTCGAG
AATACCCTCTTCGGAACGATTATGCCCCTTGACGAAATCCGAGATATCTC
AATGTGGGCTAAGACCCAAGACCCACCGGTTCACATGCATCTCGATGGAG
CAAGACTTTGGGAGGCCGTCGCTGCAGGTGCAGGTGCTCTTAGTGAGTTT
TGTGCCTGCTTTGACAGCGTTTCACTGTGCTTCACCAAGGGTCTGGGAGC
ACCCATCGGATCTGTGATTGTAGGAAACACAGAATTCATCACAAGGGCAA
GGTGGATGCGTAAGCTGCTCGGTGGTGGACTGCGCCAAACAGGGATCATT
TCGGCGCCGATGTGCGTTGCACTCGAGGAAGTGTTCTTAGGGGGCAAGCT
GAAACGGTGTCAAGAGAGAGCGAAATATATCTCTACAATGTGGGAACGTC
TAGGTGGGTCTTTGCTAAGACCCACAGAGACAAACATGATGTGGATGAAC
CTGAACGATGGAAATGTCGACAAGAAAGCATTCCAAAAAGTAGCAAAAGA
GCTAGGGCTCAAGGTGCACGAGAAAGAGCGCTTAGAAGGACGATTGGTAG
TGCATTATCAGATATCTGATGACGCTATCAAGAAGTTGGAAATTGCGATG
AGGGCTGCATTGAGTTGTTGA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:489526..490696-

>CAN33_50890-T1 ID=CAN33_50890-T1|Name=CAN33_50890-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2244bp|location=Sequence derived from alignment at NKJJ01000020.1:489526..490696- (Aspergillus niger FDAARGOS_311)
ATGACTGCCCCACTCGCGTTATAAGCCTCGAGAATACCCTCTTCGGAACG
ATTATGCCCCTTGACGAAATCCGAGATATCTCAATGTGGGCTAAGACCCA
AGACCCACCGGTTCACATGCATCTCGATGGAGCAAGACTTTGGGAGGCCG
TCGCTGCAGGTGCAGGTGCTCTTAGTGAGTTTTGTGCCTGCTTTGACAGC
GTTTCACTGTGCTTCACCAAGGGTCTGGGAGCACCCATCGGATCTGTGAT
TGTAGGAAACACAGAATTCATCACAAGGGCAAGGTGGATGCGTAAGCTGC
TCGGTGGTGGACTGCGCCAAACAGGGATCATTTCGGCGCCGATGTGCGTT
GCACTCGAGGAAGTGTTCTTAGGGGGCAAGCTGAAACGGTGTCAAGAGAG
AGCGAAATATATCTCTACAATGTGGGAACGTCTAGGTGGGTCTTTGCTAA
GACCCACAGAGACAAACATGATGTGGATGAACCTGAACGATGGAAATGTC
GACAAGAAAGCATTCCAAAAAGTAGCAAAAGAGCTAGGGCTCAAGGTGCA
CGAGAAAGAGCGCTTAGAAGGACGATTGGTAGTGCATTATCAGATATCTG
ATGACGCTATCAAGAAGTTGGAAATTGCGATGAGGGCTGCATTGAGTTGT
TGAATGACTATTGTCCGTCAGACCGAACACCCAGTGGAGGTCCATGATAC
CGGCCTCCCACAGAACAACTGGAGTACACCTGGTCGAGCCGCATACGACT
TCCGGTCTGATTTCGTTACCTCCCCGAATATGAGCATGCTCGAATCCATC
GTCAACACAACACTTCTCGACGATGAGATGATGGAGGATCCAACCACTAA
CTATTTCCAGGAGTGGATGGCTCAGTTGACAGGCCATGAAAGGGCGCTCC
TTACTTATTCGGGAACTATGAGCAACCAGGTGGCACTCCGGACGGCTCTC
ACCACCCCACCATACTCCATCCTTGCAGACCATCGCAGCCATATTCTGAA
CATGGAGGCAGGTGGGGCAGCGACTGTTTGTGGCGCTCTAATTCACGGTG
TCATCCCAGCAAATGGCCATCATTTGACGCTGGAAGACATCAAGAAGCAC
TTTGTTTTCAAGAAAGATATCTATGACTGCCCCACTCGCGTTATAAGCCT
CGAGAATACCCTCTTCGGAACGATTATGCCCCTTGACGAAATCCGAGATA
TCTCAATGTGGGCTAAGACCCAAGACCCACCGGTTCACATGCATCTCGAT
GGAGCAAGACTTTGGGAGGCCGTCGCTGCAGGTGCAGGTGCTCTTAGTGA
GTTTTGTGCCTGCTTTGACAGCGTTTCACTGTGCTTCACCAAGGGTCTGG
GAGCACCCATCGGATCTGTGATTGTAGGAAACACAGAATTCATCACAAGG
GCAAGGTGGATGCGTAAGCTGCTCGGTGGTGGACTGCGCCAAACAGGGAT
CATTTCGGCGCCGATGTGCGTTGCACTCGAGGAAGTGTTCTTAGGGGGCA
AGCTGAAACGGTGTCAAGAGAGAGCGAAATATATCTCTACAATGTGGGAA
CGTCTAGGTGGGTCTTTGCTAAGACCCACAGAGACAAACATGATGTGGAT
GAACCTGAACGATGGAAATGTCGACAAGAAAGCATTCCAAAAAGTAGCAA
AAGAGCTAGGGCTCAAGGTGCACGAGAAAGAGCGCTTAGAAGGACGATTG
GTAGTGCATTATCAGATATCTGATGACGCTATCAAGAAGTTGGAAATTGC
GATGAGGGCTGCATTGAGTTGTTGAATGACTATTGTCCGTCAGACCGAAC
ACCCAGTGGAGGTCCATGATACCGGCCTCCCACAGAACAACTGGAGTACA
CCTGGTCGAGCCGCATACGACTTCCGGTCTGATTTCGTTACCTCCCCGAA
TATGAGCATGCTCGAATCCATCGTCAACACAACACTTCTCGACGATGAGA
TGATGGAGGATCCAACCACTAACTATTTCCAGGAGTGGATGGCTCAGTTG
ACAGGCCATGAAAGGGCGCTCCTTACTTATTCGGGAACTATGAGCAACCA
GGTGGCACTCCGGACGGCTCTCACCACCCCACCATACTCCATCCTTGCAG
ACCATCGCAGCCATATTCTGAACATGGAGGCAGGTGGGGCAGCGACTGTT
TGTGGCGCTCTAATTCACGGTGTCATCCCAGCAAATGGCCATCATTTGAC
GCTGGAAGACATCAAGAAGCACTTTGTTTTCAAGAAAGATATCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016829lyase activity
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_50890CAN33_50890Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50890-T1CAN33_50890-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50890-T1.cdsCAN33_50890-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_50890-T1.exon2CAN33_50890-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_50890-T1.exon1CAN33_50890-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR015422
DBxrefInterPro:IPR015421
DBxrefInterPro:IPR001597
DBxrefInterPro:IPR023603
DBxrefPFAM:PF01212
ProductBeta-eliminating lyase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:489526..490696 -
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