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CAN33_51280-T1, CAN33_51280-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_51280-T1
Unique NameCAN33_51280-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:710266..711550+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_51280-T1 ID=CAN33_51280-T1|Name=CAN33_51280-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1285bp|location=Sequence derived from alignment at NKJJ01000020.1:710266..711550+ (Aspergillus niger FDAARGOS_311)
ATGGCCAGCATCGCCGATCTACAAGCCCGCTTGAAAGAGCTCTCAACAGC
TCTGTCCCACATCCAGCCGCTGGTCTCTCGGTTAAAGGGCTTTACGACTG
CAGTTGGACAGGGCGATCAGCCGCGATTGGAACTAGGGACGGAGATCCAT
ACTCGACTGAAAGAGGCGGAGGAGCAATTGGAGTTGCTGAAGGTCGAGGT
TGAGGCCCTGGAGGCTGCAGCGGATACGCGGCGCAAGGGTGTGGATAATG
AGAAGGAGTCGGAGAGGGAACGGGTTATTGCCTTGGCTGGACGGTTGGCG
GATGATTTGAAGAGGTAGGTGGAATCGACTGATTGCTCTTCCTGGATTGT
TTACTAATGGGTATGTTACGGCTTTGGCAGAACGAGAGGAGACTTCCGGA
ACGCACAATTACAAGCGAAGCGGAACGCTGAAGTTGCCCGACGGAAAGAG
CGAGAGCTACTGTTTACGAGGTCACAAAGTGCGGAGAGGAAGAAGCAGTC
GAGTGAGAAGCTGACGCAGGATGATATTGTCATGAATGCTTCGAATGATG
TTACGGCTGCGCTGAGACGGACGCATCAGTTGATGCAGGCGGAGCTGTCG
CGGAGTCAGTTTGCGCAGGAGACGTTAGGTTTGTGCTGGTTTACCTTGGG
TGCAGGTCAGGGTAATGGCTAACATTGGTGGTTTAGATCAATCGACTGCT
GCGCTGTCCTCGCTGTCAGAATCCTATACAGATCTCGATTCTTTGATTTC
GTCGTCACGCAATCTCATCGGGTCTTTGCTACGCTCGCAAAAGTCGGATA
CTTGGTACCTTGAGACGGCTTTCTACATATTGGTTGGCACCATTATTTGG
CTTGTCTTCCGGCGGATATTATATGGTCCCCTGTGGTGGCTCGTCTGGCT
GCCTCTCAGGCTGTTCGCGAGGTTCACGTTTGCTATTTTGGGCGCCGTCG
GGATTACCAGTAAGGCTGTTCAGTCTTCTGAACCTAGTACGATGCTCGAA
TATGTGCCGCAAGAGACCCCAATGGTTGAGCAGAAGGTGGAGCCGAACAT
CCAAAGTGCTGAGGGCGAAGCGGTCTGGGATCAAGTTCCAGTTACGGATG
AGGCAGAGGAGGACCGCTTAATTGATGAGATCGGCAAAATGGTGGAAGAA
AGCGAGGAGCAAGAGGAGACCAACATTGACGACATCTCAGAAGAGGAAAG
GCAAAGGCAGGCGGAGTTGCCCCGGAACCCTAAGAAGAGGATGTTCGAGG
CTACGGATGTACCACAGCAGAAGGACGAACTATAG
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Coding sequence (CDS) from alignment at NKJJ01000020.1:710266..711550+

>CAN33_51280-T1 ID=CAN33_51280-T1|Name=CAN33_51280-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3483bp|location=Sequence derived from alignment at NKJJ01000020.1:710266..711550+ (Aspergillus niger FDAARGOS_311)
ATGGCCAGCATCGCCGATCTACAAGCCCGCTTGAAAGAGCTCTCAACAGC
TCTGTCCCACATCCAGCCGCTGGTCTCTCGGTTAAAGGGCTTTACGACTG
CAGTTGGACAGGGCGATCAGCCGCGATTGGAACTAGGGACGGAGATCCAT
ACTCGACTGAAAGAGGCGGAGGAGCAATTGGAGTTGCTGAAGGTCGAGGT
TGAGGCCCTGGAGGCTGCAGCGGATACGCGGCGCAAGGGTGTGGATAATG
AGAAGGAGTCGGAGAGGGAACGGGTTATTGCCTTGGCTGGACGGTTGGCG
GATGATTTGAAGAGAACGAGAGGAGACTTCCGGAACGCACAATTACAAGC
GAAGCGGAACGCTGAAGTTGCCCGACGGAAAGAGCGAGAGCTACTGTTTA
CGAGGTCACAAAGTGCGGAGAGGAAGAAGCAGTCGAGTGAGAAGCTGACG
CAGGATGATATTGTCATGAATGCTTCGAATGATGTTACGGCTGCGCTGAG
ACGGACGCATCAGTTGATGCAGGCGGAGCTGTCGCGGAGTCAGTTTGCGC
AGGAGACGTTAGATCAATCGACTGCTGCGCTGTCCTCGCTGTCAGAATCC
TATACAGATCTCGATTCTTTGATTTCGTCGTCACGCAATCTCATCGGGTC
TTTGCTACGCTCGCAAAAGTCGGATACTTGGTACCTTGAGACGGCTTTCT
ACATATTGGTTGGCACCATTATTTGGCTTGTCTTCCGGCGGATATTATAT
GGTCCCCTGTGGTGGCTCGTCTGGCTGCCTCTCAGGCTGTTCGCGAGGTT
CACGTTTGCTATTTTGGGCGCCGTCGGGATTACCAGTAAGGCTGTTCAGT
CTTCTGAACCTAGTACGATGCTCGAATATGTGCCGCAAGAGACCCCAATG
GTTGAGCAGAAGGTGGAGCCGAACATCCAAAGTGCTGAGGGCGAAGCGGT
CTGGGATCAAGTTCCAGTTACGGATGAGGCAGAGGAGGACCGCTTAATTG
ATGAGATCGGCAAAATGGTGGAAGAAAGCGAGGAGCAAGAGGAGACCAAC
ATTGACGACATCTCAGAAGAGGAAAGGCAAAGGCAGGCGGAGTTGCCCCG
GAACCCTAAGAAGAGGATGTTCGAGGCTACGGATGTACCACAGCAGAAGG
ACGAACTATAGATGGCCAGCATCGCCGATCTACAAGCCCGCTTGAAAGAG
CTCTCAACAGCTCTGTCCCACATCCAGCCGCTGGTCTCTCGGTTAAAGGG
CTTTACGACTGCAGTTGGACAGGGCGATCAGCCGCGATTGGAACTAGGGA
CGGAGATCCATACTCGACTGAAAGAGGCGGAGGAGCAATTGGAGTTGCTG
AAGGTCGAGGTTGAGGCCCTGGAGGCTGCAGCGGATACGCGGCGCAAGGG
TGTGGATAATGAGAAGGAGTCGGAGAGGGAACGGGTTATTGCCTTGGCTG
GACGGTTGGCGGATGATTTGAAGAGAACGAGAGGAGACTTCCGGAACGCA
CAATTACAAGCGAAGCGGAACGCTGAAGTTGCCCGACGGAAAGAGCGAGA
GCTACTGTTTACGAGGTCACAAAGTGCGGAGAGGAAGAAGCAGTCGAGTG
AGAAGCTGACGCAGGATGATATTGTCATGAATGCTTCGAATGATGTTACG
GCTGCGCTGAGACGGACGCATCAGTTGATGCAGGCGGAGCTGTCGCGGAG
TCAGTTTGCGCAGGAGACGTTAGATCAATCGACTGCTGCGCTGTCCTCGC
TGTCAGAATCCTATACAGATCTCGATTCTTTGATTTCGTCGTCACGCAAT
CTCATCGGGTCTTTGCTACGCTCGCAAAAGTCGGATACTTGGTACCTTGA
GACGGCTTTCTACATATTGGTTGGCACCATTATTTGGCTTGTCTTCCGGC
GGATATTATATGGTCCCCTGTGGTGGCTCGTCTGGCTGCCTCTCAGGCTG
TTCGCGAGGTTCACGTTTGCTATTTTGGGCGCCGTCGGGATTACCAGTAA
GGCTGTTCAGTCTTCTGAACCTAGTACGATGCTCGAATATGTGCCGCAAG
AGACCCCAATGGTTGAGCAGAAGGTGGAGCCGAACATCCAAAGTGCTGAG
GGCGAAGCGGTCTGGGATCAAGTTCCAGTTACGGATGAGGCAGAGGAGGA
CCGCTTAATTGATGAGATCGGCAAAATGGTGGAAGAAAGCGAGGAGCAAG
AGGAGACCAACATTGACGACATCTCAGAAGAGGAAAGGCAAAGGCAGGCG
GAGTTGCCCCGGAACCCTAAGAAGAGGATGTTCGAGGCTACGGATGTACC
ACAGCAGAAGGACGAACTATAGATGGCCAGCATCGCCGATCTACAAGCCC
GCTTGAAAGAGCTCTCAACAGCTCTGTCCCACATCCAGCCGCTGGTCTCT
CGGTTAAAGGGCTTTACGACTGCAGTTGGACAGGGCGATCAGCCGCGATT
GGAACTAGGGACGGAGATCCATACTCGACTGAAAGAGGCGGAGGAGCAAT
TGGAGTTGCTGAAGGTCGAGGTTGAGGCCCTGGAGGCTGCAGCGGATACG
CGGCGCAAGGGTGTGGATAATGAGAAGGAGTCGGAGAGGGAACGGGTTAT
TGCCTTGGCTGGACGGTTGGCGGATGATTTGAAGAGAACGAGAGGAGACT
TCCGGAACGCACAATTACAAGCGAAGCGGAACGCTGAAGTTGCCCGACGG
AAAGAGCGAGAGCTACTGTTTACGAGGTCACAAAGTGCGGAGAGGAAGAA
GCAGTCGAGTGAGAAGCTGACGCAGGATGATATTGTCATGAATGCTTCGA
ATGATGTTACGGCTGCGCTGAGACGGACGCATCAGTTGATGCAGGCGGAG
CTGTCGCGGAGTCAGTTTGCGCAGGAGACGTTAGATCAATCGACTGCTGC
GCTGTCCTCGCTGTCAGAATCCTATACAGATCTCGATTCTTTGATTTCGT
CGTCACGCAATCTCATCGGGTCTTTGCTACGCTCGCAAAAGTCGGATACT
TGGTACCTTGAGACGGCTTTCTACATATTGGTTGGCACCATTATTTGGCT
TGTCTTCCGGCGGATATTATATGGTCCCCTGTGGTGGCTCGTCTGGCTGC
CTCTCAGGCTGTTCGCGAGGTTCACGTTTGCTATTTTGGGCGCCGTCGGG
ATTACCAGTAAGGCTGTTCAGTCTTCTGAACCTAGTACGATGCTCGAATA
TGTGCCGCAAGAGACCCCAATGGTTGAGCAGAAGGTGGAGCCGAACATCC
AAAGTGCTGAGGGCGAAGCGGTCTGGGATCAAGTTCCAGTTACGGATGAG
GCAGAGGAGGACCGCTTAATTGATGAGATCGGCAAAATGGTGGAAGAAAG
CGAGGAGCAAGAGGAGACCAACATTGACGACATCTCAGAAGAGGAAAGGC
AAAGGCAGGCGGAGTTGCCCCGGAACCCTAAGAAGAGGATGTTCGAGGCT
ACGGATGTACCACAGCAGAAGGACGAACTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006890retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
Vocabulary: Molecular Function
TermDefinition
GO:0005484SNAP receptor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_51280CAN33_51280Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51280-T1.exon1CAN33_51280-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_51280-T1.exon2CAN33_51280-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_51280-T1.exon3CAN33_51280-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51280-T1.cdsCAN33_51280-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_51280-T1CAN33_51280-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR005606
DBxrefPFAM:PF03908
ProductSec20 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:710266..711550 +
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