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CAN33_52250-T1, CAN33_52250-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52250-T1
Unique NameCAN33_52250-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1371745..1372714+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52250-T1 ID=CAN33_52250-T1|Name=CAN33_52250-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=970bp|location=Sequence derived from alignment at NKJJ01000020.1:1371745..1372714+ (Aspergillus niger FDAARGOS_311)
ATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAGGTAA
ATACTATCTTGTTGCTCCTCCCTCCTGATTCGCGCCTAGTAACTCACCGG
GTTGTCGTTATCCCAGGCCCTTCCTCCGTGCAGCTCCCATTTGCAGCATT
GTCGCTCAACCCGGCGAAAACCTCCGTAAGAGCTGGGTCTACAGAGTCTC
GAGAGCGCAGACGCCATGACCCTTTCCTTATGGCGCAATCTCGCCAACGC
AAGGCCGCCAACATCTCTCGCCAGAAAGCCCTCACCAAAGAGCGCGAAGG
GTCTGTCGGAGACCCCGTCCAAAGCGAACCTACACCCTTTATCCAGGAAC
TCAGAAAGACCCAAGCGACTTTGCAGGACACAGACCTCAATTACTTCGTC
ACACCGGATGGTCTCAATGAGGCGATGGAGTACTCGAAGAACCTGACATC
ACCGATTCGGAACCCGGACCGCGACACTGCTGATCCTCAGCTCGAGAAAG
AAGCGGCTGAGAAGCATCTTCAAGAACATCGGAATGCACAGGAAGCCATC
CGTCGTATTGTCAGTGTCGCCAACGGAAACACAAAGGACCACATGCGGCT
TCACATCCAGAAATGCATTGAGACCTTTGGCCGGCATAAGACCGACAGCG
TATTGCCGCCCAAGCCATCTGGCGTATCGCATGACTCTGCGACTGTTCAT
CTTGAGAAAACTCCCCGCGTTGGTCCGGATACTGGCTCTCCGGAAGTACA
GGTTGCCATTCTCACTGCAAAGATCATGAACTTGTCTAGACATCTCCAGA
CGACGAAAAAGGACCGACACAACAAGCGCAACTTGCGTCTACTTGTTCAC
AAGAGACAGAAGTTGCTTCGTTACTTGCGGAGGAAGGAAAGAGGTGGTCC
CCGGTGGCAGAATCTGATGGAGAAGCTGGGTCTCTCGGAAGCTGCTTGGA
AGGGTGAGATCTCCATGTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1371745..1372714+

>CAN33_52250-T1 ID=CAN33_52250-T1|Name=CAN33_52250-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1800bp|location=Sequence derived from alignment at NKJJ01000020.1:1371745..1372714+ (Aspergillus niger FDAARGOS_311)
ATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAGGCCC
TTCCTCCGTGCAGCTCCCATTTGCAGCATTGTCGCTCAACCCGGCGAAAA
CCTCCGTAAGAGCTGGGTCTACAGAGTCTCGAGAGCGCAGACGCCATGAC
CCTTTCCTTATGGCGCAATCTCGCCAACGCAAGGCCGCCAACATCTCTCG
CCAGAAAGCCCTCACCAAAGAGCGCGAAGGGTCTGTCGGAGACCCCGTCC
AAAGCGAACCTACACCCTTTATCCAGGAACTCAGAAAGACCCAAGCGACT
TTGCAGGACACAGACCTCAATTACTTCGTCACACCGGATGGTCTCAATGA
GGCGATGGAGTACTCGAAGAACCTGACATCACCGATTCGGAACCCGGACC
GCGACACTGCTGATCCTCAGCTCGAGAAAGAAGCGGCTGAGAAGCATCTT
CAAGAACATCGGAATGCACAGGAAGCCATCCGTCGTATTGTCAGTGTCGC
CAACGGAAACACAAAGGACCACATGCGGCTTCACATCCAGAAATGCATTG
AGACCTTTGGCCGGCATAAGACCGACAGCGTATTGCCGCCCAAGCCATCT
GGCGTATCGCATGACTCTGCGACTGTTCATCTTGAGAAAACTCCCCGCGT
TGGTCCGGATACTGGCTCTCCGGAAGTACAGGTTGCCATTCTCACTGCAA
AGATCATGAACTTGTCTAGACATCTCCAGACGACGAAAAAGGACCGACAC
AACAAGCGCAACTTGCGTCTACTTGTTCACAAGAGACAGAAGTTGCTTCG
TTACTTGCGGAGGAAGGAAAGAGGTGGTCCCCGGTGGCAGAATCTGATGG
AGAAGCTGGGTCTCTCGGAAGCTGCTTGGAAGGGTGAGATCTCCATGTAA
ATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAGGCCC
TTCCTCCGTGCAGCTCCCATTTGCAGCATTGTCGCTCAACCCGGCGAAAA
CCTCCGTAAGAGCTGGGTCTACAGAGTCTCGAGAGCGCAGACGCCATGAC
CCTTTCCTTATGGCGCAATCTCGCCAACGCAAGGCCGCCAACATCTCTCG
CCAGAAAGCCCTCACCAAAGAGCGCGAAGGGTCTGTCGGAGACCCCGTCC
AAAGCGAACCTACACCCTTTATCCAGGAACTCAGAAAGACCCAAGCGACT
TTGCAGGACACAGACCTCAATTACTTCGTCACACCGGATGGTCTCAATGA
GGCGATGGAGTACTCGAAGAACCTGACATCACCGATTCGGAACCCGGACC
GCGACACTGCTGATCCTCAGCTCGAGAAAGAAGCGGCTGAGAAGCATCTT
CAAGAACATCGGAATGCACAGGAAGCCATCCGTCGTATTGTCAGTGTCGC
CAACGGAAACACAAAGGACCACATGCGGCTTCACATCCAGAAATGCATTG
AGACCTTTGGCCGGCATAAGACCGACAGCGTATTGCCGCCCAAGCCATCT
GGCGTATCGCATGACTCTGCGACTGTTCATCTTGAGAAAACTCCCCGCGT
TGGTCCGGATACTGGCTCTCCGGAAGTACAGGTTGCCATTCTCACTGCAA
AGATCATGAACTTGTCTAGACATCTCCAGACGACGAAAAAGGACCGACAC
AACAAGCGCAACTTGCGTCTACTTGTTCACAAGAGACAGAAGTTGCTTCG
TTACTTGCGGAGGAAGGAAAGAGGTGGTCCCCGGTGGCAGAATCTGATGG
AGAAGCTGGGTCTCTCGGAAGCTGCTTGGAAGGGTGAGATCTCCATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52250CAN33_52250Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52250-T1.exon1CAN33_52250-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_52250-T1.exon2CAN33_52250-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52250-T1.cdsCAN33_52250-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52250-T1CAN33_52250-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092643JW
DBxrefInterPro:IPR009068
DBxrefInterPro:IPR005290
DBxrefInterPro:IPR000589
DBxrefPFAM:PF00312
Productribosomal protein S15
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1371745..1372714 +
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