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CAN33_52280-T1, CAN33_52280-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_52280-T1
Unique NameCAN33_52280-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:1387687..1388898-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_52280-T1 ID=CAN33_52280-T1|Name=CAN33_52280-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1212bp|location=Sequence derived from alignment at NKJJ01000020.1:1387687..1388898- (Aspergillus niger FDAARGOS_311)
ATGCATGTCAAAAGCTACCTGTCTGCCGTCCTGTACGGATTGCCAGCGCT
GACCCAAGTCGCTGCTGCCAAGTCCACAGGGGATCCTTTCCAACTCTACA
CTATCAGCGCAGAAAACATCACAGCCAAGCTCATCCCTTATGGAGCACGT
TTGACTTCTCTCCTCGTCCCTGACCGCGACGGCAACTTCCAGGATGTTGT
CGTAGGCTACGACGACCCCAAGCAGTATCTCAAGGATACCGAAACCAACC
ACACCTACTTTGGTGCAGTTGTCGGCCGCTACGCCAACCGGATCAAGAAC
GGCACATTCTCAATTGGTTCGGATGTGTACCACATCCCCGAGAACGAGAA
TGACGGTGAAGACACGCTCCACGGAGGTACCGTAGGCTATGACCAGCGCA
ACTGGACCGTGACCGCGTACAGCAATTCCTCCATCACATTCACCCTGGTT
GACCGTGCCTTCGAAGACTTCCCCGGAGACGTCATCACCCATGCCACATT
CAGCGTGCAGACCAAAGTCACCCCCGAGAATCCCCAAGGGCTTCCCCAGT
TGACCACCAAACTCGTCTCTCTTGCCCTGACCGAGACAACCCCAATCATG
CTTGCCAACCACATTTACTGGAACTTGAACGCCTTCAAGGACGAGACTAT
CCTCGAAGACACCTGGCTCCAGCTCCCACTCTCCAAGCGCTTGATCGGCA
CGAACGGCATCCTAATCCCCAACGGCACCATCCTTGACGTCGACGTCTAC
GACGGCGCCCCGGATTTCGTCTCCGGCAAGCTAGTCGGTCAAGACATCGA
GAAAACCGACGGACTCTGCGGAACCGACTGCATCGGGTACGACAACTGCT
TCATCGTAGACCGGCCTCCTCAATACGCAGCTCGTAACTCCATCGTCCCC
ATCATCCACATGAACTCCAGCACCACCGGAATCAGCCTGGACGTCGCTAC
CAACCAGCAAGCTCTTCAGATCTACGCGTGCAATAGCCAGAACGGCACCA
TCCCCGTCAAGCAATCCCAAGTCCAGCGCAACAAGGCCGAGGGTGTCGAT
GGTGCTGAATACGTCAACCAGCATGGTTGCATTGTCATTGAAACTGAGGG
CTGGATTGACGGTATTAACAACCCGCAGTGGGGTCAATTGCCGGATCAGA
TCTATTCTCCTGAGACGGGCCCTGCTGTGAACTGGGCCACTTACCAGTTC
GGTACTGTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000020.1:1387687..1388898-

>CAN33_52280-T1 ID=CAN33_52280-T1|Name=CAN33_52280-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1212bp|location=Sequence derived from alignment at NKJJ01000020.1:1387687..1388898- (Aspergillus niger FDAARGOS_311)
ATGCATGTCAAAAGCTACCTGTCTGCCGTCCTGTACGGATTGCCAGCGCT
GACCCAAGTCGCTGCTGCCAAGTCCACAGGGGATCCTTTCCAACTCTACA
CTATCAGCGCAGAAAACATCACAGCCAAGCTCATCCCTTATGGAGCACGT
TTGACTTCTCTCCTCGTCCCTGACCGCGACGGCAACTTCCAGGATGTTGT
CGTAGGCTACGACGACCCCAAGCAGTATCTCAAGGATACCGAAACCAACC
ACACCTACTTTGGTGCAGTTGTCGGCCGCTACGCCAACCGGATCAAGAAC
GGCACATTCTCAATTGGTTCGGATGTGTACCACATCCCCGAGAACGAGAA
TGACGGTGAAGACACGCTCCACGGAGGTACCGTAGGCTATGACCAGCGCA
ACTGGACCGTGACCGCGTACAGCAATTCCTCCATCACATTCACCCTGGTT
GACCGTGCCTTCGAAGACTTCCCCGGAGACGTCATCACCCATGCCACATT
CAGCGTGCAGACCAAAGTCACCCCCGAGAATCCCCAAGGGCTTCCCCAGT
TGACCACCAAACTCGTCTCTCTTGCCCTGACCGAGACAACCCCAATCATG
CTTGCCAACCACATTTACTGGAACTTGAACGCCTTCAAGGACGAGACTAT
CCTCGAAGACACCTGGCTCCAGCTCCCACTCTCCAAGCGCTTGATCGGCA
CGAACGGCATCCTAATCCCCAACGGCACCATCCTTGACGTCGACGTCTAC
GACGGCGCCCCGGATTTCGTCTCCGGCAAGCTAGTCGGTCAAGACATCGA
GAAAACCGACGGACTCTGCGGAACCGACTGCATCGGGTACGACAACTGCT
TCATCGTAGACCGGCCTCCTCAATACGCAGCTCGTAACTCCATCGTCCCC
ATCATCCACATGAACTCCAGCACCACCGGAATCAGCCTGGACGTCGCTAC
CAACCAGCAAGCTCTTCAGATCTACGCGTGCAATAGCCAGAACGGCACCA
TCCCCGTCAAGCAATCCCAAGTCCAGCGCAACAAGGCCGAGGGTGTCGAT
GGTGCTGAATACGTCAACCAGCATGGTTGCATTGTCATTGAAACTGAGGG
CTGGATTGACGGTATTAACAACCCGCAGTGGGGTCAATTGCCGGATCAGA
TCTATTCTCCTGAGACGGGCCCTGCTGTGAACTGGGCCACTTACCAGTTC
GGTACTGTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0030246carbohydrate binding
GO:0016853isomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_52280CAN33_52280Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52280-T1.cdsCAN33_52280-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52280-T1.exon1CAN33_52280-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_52280-T1CAN33_52280-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-23)
DBxrefInterPro:IPR011013
DBxrefInterPro:IPR014718
DBxrefInterPro:IPR008183
DBxrefPFAM:PF01263
ProductAldose 1-epimerase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:1387687..1388898 -
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