You are here

Home

CAN33_55140-T1, CAN33_55140-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_55140-T1
Unique NameCAN33_55140-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000020.1:3294777..3295977+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_55140-T1 ID=CAN33_55140-T1|Name=CAN33_55140-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1201bp|location=Sequence derived from alignment at NKJJ01000020.1:3294777..3295977+ (Aspergillus niger FDAARGOS_311)
ATGTCTACTATGGCCAGCGGCGCGAAGTTGGAGGCGTCGCATCCTCCCAA
GGCGGCGAATGCTGCAGCCCCTGCAAAAAAAGTTCATTATCCTTTCTGGT
TCGGTGGTTCAGCATCATGCTTTGCGGCTGCCGTTACTCACCCTCTGGAT
CTCGGTAAGCTCTAATTCAGCCAACAAAAAAATAAAAAAGCATGTGCTGG
AACTGAAGCTAATCCCCGTCTATAGTGAAGGTAATTTCTGCCTCCTGGAC
TTTTTATAGGAACTCCTGAATTTTCCCTCCGCGTGCTTATTCCTATACTT
CGTTGTCTCACCGGAACGCTGATCGATGTGCGTTTTGAAAATTTATAGGT
CCGCTTGCAGACCCGCGGGCCTGGCGCCCCCTCGACTATGGTCGGCACAT
TCGTGCATGTGTTCAAGAATGACGGATTCTTCGGTCTTTACAGCGGGGTA
TGTAGTATCCACCAATGCTCCAGATCGTGTCGATTCTATTACAGGGTGCT
AAAGTTACTTCCTGTAGTTGTCCGCCGCAATTCTGCGCCAACTGACCTAC
TCCACCACACGATTCGGTATCTACGAGGAACTGAAAAACCACTTCACCTC
TCCCGACTCGCCTCCTGGCCTCTTCACCCTAATCGGTATGGCCTCTGCCT
CCGGCTTCATCGGTGGCATGGCTGGTAACCCCGCCGACGTCCTGAACGTG
CGGATGCAATCCGACGCTGCTCTTCCTCCCGCTCAACGCCGTAACTACCG
CAACGCGATACACGGATTGGTGACCATGACGCGCACCGAAGGTCCCGCCA
GCTTGTTCCGCGGAGTGTGGCCGAACTCGACCCGTGCTGTTCTTATGACG
ACGTCGCAATTGGCCTCGTACGATACCTTCAAGCGTCTGTGTCTGGAGAA
CCTCGGCATGTCCGATAACATGGGAACGCATTTCACTGCCTCCTTCATGG
CTGGATTTGTGGCTACTACTGTCTGTAGTCCTGTCGATGTTATCAAGACT
CGTGTCATGACCGCTTCTCCGGCTGAAGGCCGCAGTCAGAGCATCGTTGG
ACTGCTCCGCGACATCACTAGGAAGGAGGGCCTCGCGTGGGCTTTCCGTG
GTTGGGTGCCGAGCTTCATTCGTCTCGGTCCTCATACCATTGCCACGTTT
ATCTTCCTTGAGGAGCATAAGAAGCTCTATCGCTTGTTGAAGGGGCTTTG
A
back to top

Coding sequence (CDS) from alignment at NKJJ01000020.1:3294777..3295977+

>CAN33_55140-T1 ID=CAN33_55140-T1|Name=CAN33_55140-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3840bp|location=Sequence derived from alignment at NKJJ01000020.1:3294777..3295977+ (Aspergillus niger FDAARGOS_311)
ATGTCTACTATGGCCAGCGGCGCGAAGTTGGAGGCGTCGCATCCTCCCAA
GGCGGCGAATGCTGCAGCCCCTGCAAAAAAAGTTCATTATCCTTTCTGGT
TCGGTGGTTCAGCATCATGCTTTGCGGCTGCCGTTACTCACCCTCTGGAT
CTCGGAACTCCTGAATTTTCCCTCCGCGTCCGCTTGCAGACCCGCGGGCC
TGGCGCCCCCTCGACTATGGTCGGCACATTCGTGCATGTGTTCAAGAATG
ACGGATTCTTCGGTCTTTACAGCGGGTTGTCCGCCGCAATTCTGCGCCAA
CTGACCTACTCCACCACACGATTCGGTATCTACGAGGAACTGAAAAACCA
CTTCACCTCTCCCGACTCGCCTCCTGGCCTCTTCACCCTAATCGGTATGG
CCTCTGCCTCCGGCTTCATCGGTGGCATGGCTGGTAACCCCGCCGACGTC
CTGAACGTGCGGATGCAATCCGACGCTGCTCTTCCTCCCGCTCAACGCCG
TAACTACCGCAACGCGATACACGGATTGGTGACCATGACGCGCACCGAAG
GTCCCGCCAGCTTGTTCCGCGGAGTGTGGCCGAACTCGACCCGTGCTGTT
CTTATGACGACGTCGCAATTGGCCTCGTACGATACCTTCAAGCGTCTGTG
TCTGGAGAACCTCGGCATGTCCGATAACATGGGAACGCATTTCACTGCCT
CCTTCATGGCTGGATTTGTGGCTACTACTGTCTGTAGTCCTGTCGATGTT
ATCAAGACTCGTGTCATGACCGCTTCTCCGGCTGAAGGCCGCAGTCAGAG
CATCGTTGGACTGCTCCGCGACATCACTAGGAAGGAGGGCCTCGCGTGGG
CTTTCCGTGGTTGGGTGCCGAGCTTCATTCGTCTCGGTCCTCATACCATT
GCCACGTTTATCTTCCTTGAGGAGCATAAGAAGCTCTATCGCTTGTTGAA
GGGGCTTTGAATGTCTACTATGGCCAGCGGCGCGAAGTTGGAGGCGTCGC
ATCCTCCCAAGGCGGCGAATGCTGCAGCCCCTGCAAAAAAAGTTCATTAT
CCTTTCTGGTTCGGTGGTTCAGCATCATGCTTTGCGGCTGCCGTTACTCA
CCCTCTGGATCTCGGAACTCCTGAATTTTCCCTCCGCGTCCGCTTGCAGA
CCCGCGGGCCTGGCGCCCCCTCGACTATGGTCGGCACATTCGTGCATGTG
TTCAAGAATGACGGATTCTTCGGTCTTTACAGCGGGTTGTCCGCCGCAAT
TCTGCGCCAACTGACCTACTCCACCACACGATTCGGTATCTACGAGGAAC
TGAAAAACCACTTCACCTCTCCCGACTCGCCTCCTGGCCTCTTCACCCTA
ATCGGTATGGCCTCTGCCTCCGGCTTCATCGGTGGCATGGCTGGTAACCC
CGCCGACGTCCTGAACGTGCGGATGCAATCCGACGCTGCTCTTCCTCCCG
CTCAACGCCGTAACTACCGCAACGCGATACACGGATTGGTGACCATGACG
CGCACCGAAGGTCCCGCCAGCTTGTTCCGCGGAGTGTGGCCGAACTCGAC
CCGTGCTGTTCTTATGACGACGTCGCAATTGGCCTCGTACGATACCTTCA
AGCGTCTGTGTCTGGAGAACCTCGGCATGTCCGATAACATGGGAACGCAT
TTCACTGCCTCCTTCATGGCTGGATTTGTGGCTACTACTGTCTGTAGTCC
TGTCGATGTTATCAAGACTCGTGTCATGACCGCTTCTCCGGCTGAAGGCC
GCAGTCAGAGCATCGTTGGACTGCTCCGCGACATCACTAGGAAGGAGGGC
CTCGCGTGGGCTTTCCGTGGTTGGGTGCCGAGCTTCATTCGTCTCGGTCC
TCATACCATTGCCACGTTTATCTTCCTTGAGGAGCATAAGAAGCTCTATC
GCTTGTTGAAGGGGCTTTGAATGTCTACTATGGCCAGCGGCGCGAAGTTG
GAGGCGTCGCATCCTCCCAAGGCGGCGAATGCTGCAGCCCCTGCAAAAAA
AGTTCATTATCCTTTCTGGTTCGGTGGTTCAGCATCATGCTTTGCGGCTG
CCGTTACTCACCCTCTGGATCTCGGAACTCCTGAATTTTCCCTCCGCGTC
CGCTTGCAGACCCGCGGGCCTGGCGCCCCCTCGACTATGGTCGGCACATT
CGTGCATGTGTTCAAGAATGACGGATTCTTCGGTCTTTACAGCGGGTTGT
CCGCCGCAATTCTGCGCCAACTGACCTACTCCACCACACGATTCGGTATC
TACGAGGAACTGAAAAACCACTTCACCTCTCCCGACTCGCCTCCTGGCCT
CTTCACCCTAATCGGTATGGCCTCTGCCTCCGGCTTCATCGGTGGCATGG
CTGGTAACCCCGCCGACGTCCTGAACGTGCGGATGCAATCCGACGCTGCT
CTTCCTCCCGCTCAACGCCGTAACTACCGCAACGCGATACACGGATTGGT
GACCATGACGCGCACCGAAGGTCCCGCCAGCTTGTTCCGCGGAGTGTGGC
CGAACTCGACCCGTGCTGTTCTTATGACGACGTCGCAATTGGCCTCGTAC
GATACCTTCAAGCGTCTGTGTCTGGAGAACCTCGGCATGTCCGATAACAT
GGGAACGCATTTCACTGCCTCCTTCATGGCTGGATTTGTGGCTACTACTG
TCTGTAGTCCTGTCGATGTTATCAAGACTCGTGTCATGACCGCTTCTCCG
GCTGAAGGCCGCAGTCAGAGCATCGTTGGACTGCTCCGCGACATCACTAG
GAAGGAGGGCCTCGCGTGGGCTTTCCGTGGTTGGGTGCCGAGCTTCATTC
GTCTCGGTCCTCATACCATTGCCACGTTTATCTTCCTTGAGGAGCATAAG
AAGCTCTATCGCTTGTTGAAGGGGCTTTGAATGTCTACTATGGCCAGCGG
CGCGAAGTTGGAGGCGTCGCATCCTCCCAAGGCGGCGAATGCTGCAGCCC
CTGCAAAAAAAGTTCATTATCCTTTCTGGTTCGGTGGTTCAGCATCATGC
TTTGCGGCTGCCGTTACTCACCCTCTGGATCTCGGAACTCCTGAATTTTC
CCTCCGCGTCCGCTTGCAGACCCGCGGGCCTGGCGCCCCCTCGACTATGG
TCGGCACATTCGTGCATGTGTTCAAGAATGACGGATTCTTCGGTCTTTAC
AGCGGGTTGTCCGCCGCAATTCTGCGCCAACTGACCTACTCCACCACACG
ATTCGGTATCTACGAGGAACTGAAAAACCACTTCACCTCTCCCGACTCGC
CTCCTGGCCTCTTCACCCTAATCGGTATGGCCTCTGCCTCCGGCTTCATC
GGTGGCATGGCTGGTAACCCCGCCGACGTCCTGAACGTGCGGATGCAATC
CGACGCTGCTCTTCCTCCCGCTCAACGCCGTAACTACCGCAACGCGATAC
ACGGATTGGTGACCATGACGCGCACCGAAGGTCCCGCCAGCTTGTTCCGC
GGAGTGTGGCCGAACTCGACCCGTGCTGTTCTTATGACGACGTCGCAATT
GGCCTCGTACGATACCTTCAAGCGTCTGTGTCTGGAGAACCTCGGCATGT
CCGATAACATGGGAACGCATTTCACTGCCTCCTTCATGGCTGGATTTGTG
GCTACTACTGTCTGTAGTCCTGTCGATGTTATCAAGACTCGTGTCATGAC
CGCTTCTCCGGCTGAAGGCCGCAGTCAGAGCATCGTTGGACTGCTCCGCG
ACATCACTAGGAAGGAGGGCCTCGCGTGGGCTTTCCGTGGTTGGGTGCCG
AGCTTCATTCGTCTCGGTCCTCATACCATTGCCACGTTTATCTTCCTTGA
GGAGCATAAGAAGCTCTATCGCTTGTTGAAGGGGCTTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031966mitochondrial membrane
Vocabulary: Biological Process
TermDefinition
GO:0006839mitochondrial transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_55140CAN33_55140Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55140-T1.exon1CAN33_55140-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_55140-T1.exon2CAN33_55140-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_55140-T1.exon3CAN33_55140-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_55140-T1.exon4CAN33_55140-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55140-T1.cdsCAN33_55140-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_55140-T1CAN33_55140-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023395
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR002030
DBxrefPFAM:PF00153
ProductMitochondrial carrier protein family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000020.1supercontigNKJJ01000020.1:3294777..3295977 +
Powered by Drupal