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CAN33_45085-T1, CAN33_45085-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_45085-T1
Unique NameCAN33_45085-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1831689..1834054+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_45085-T1 ID=CAN33_45085-T1|Name=CAN33_45085-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2366bp|location=Sequence derived from alignment at NKJJ01000022.1:1831689..1834054+ (Aspergillus niger FDAARGOS_311)
ATGAGTGCTGCAAAGGTTTCCAAGAAGCGCAAGGCTGTCACCAAAGATGT
CGAGGAGGAGGCCGGTGTGTTCTCTGGCGACGAATTGAACGTCGGCGACA
TTGATGGTGCGCTTTCGGACGATGCCAACGACCTATCGAGCGACGAGGAG
GATTCCGAAGTTGAATTGGTAGACGACTTCAGCTCAGATGAGGATGAAGA
TGGAGAGGAGGAGTTGGACAGCGATGAGATCCCCTCCGACGGAGAGGCGC
CTCTCAAGAAGAAGTCCGGCACATCAGCTGCGGACCTAGAAGTACCTACG
AATGACGACGAGAGCTCCAGCGAGGAAGAGCAACCCAACTTCCGCATTGA
AAAGGATGCCAATGGAAACGACCGTTACATCTACGACGAGATCAACCCAG
ATGACAACTCCGATTACTCTGACGTCGAAGAGAATGCGAACACGATCGGT
AACATTCCGTTGTCTTTCTACGACCAGTACCCCCACATTGGCTACGACAT
CAATGGAAAGAAGATCATGCGTCCTGCCACTGGTGAGGCTCTGGATGCTT
TGCTTGACAGCATTGAGATCCCCAAGGGCTTCACCGGTCTGACTGATCCC
TCGACCGGTAAGCCTCTGGAGTTGAGCCAGGATGAGCTGGAGCTGCTGCG
CAAGGTGCAGATGAACGAAATTCCCGAGGAGGGCTACAACCCGTACGAGC
CTTTGATGGAATGGTTCAGTAACAAGCAGGAAATCATGCCCCTTAGTGCT
GCTCCGGAACCCAAGCGTCGCTTCGTTCCGTCAAAGCACGAAGCCAAGCG
GGTCATGAAGATTGTGAAGGCCATCCGCGAAGGTCGCATCCTGCCTTACA
AGCCCCCGTCGGAAGAGAAGGAGGAGGACCTCGAGCTTATCAATTATGAC
CTGTGGGCGGACGAGGCCGAGCGTCCGGACCACCCCATGCACGTTCCTGC
CCCCAAGCTCCCCCCGCCAGGCTACGAGGAGAGTTACCACCCGCCTCCGG
AGTATCTCCCCGACAACAAGGAGCGCAAGGCCTGGCAGGAGGCCGACCCC
GAAGACCGGGAGCGGGAATATCTCCCTACCGACTTTGGCTCTCTCCGCAA
GGTTCCTGGTTACGGCGAGTTTGTCAAGGAGAAGTTCGAGCGTTGCTTGG
ATCTCTACTTGGCTCCTAGAGTTCGCCGCAGCAAGCTCAACATCGACCCG
GAGAGTCTGCTCCCCAAGCTGCCCAGCCCTGAAGAGTTGAAGCCGTTCCC
GTCCGTCTGCGCTACGGTGTTCCGGGGACACAAGGGCCGTGTTCGTTCCC
TTGCCGTCGACCCTACGGGCGTGTGGCTCGCCACTGGTGGTGACGATGGT
ACCGTCCGCGTTTGGGAATTGCTCACCGGTCGCCAGCTGTATAGCGTCAA
GGTTGGTGAAGAGGATCCTGTCAACGTTGTCCGCTGGAGGCCCAGCAAGG
ATGCTGTGGTCCTAGCTGCCGCCGCGGGTGACGATATCTACCTCATCGTG
CCCCCGATCCTCGACCCCGAACTCGAGCAAGCCAGCTTGGATCTTCTCGA
CGCCGGCTGGGGATACGCCGCTTCGAAGCCTGCCCCGAAGGCCTCGGAAG
AAGGCAAGAAGACCACGCCTCCCCAGTGGGTGCGTCCCTCGGCCGCTCTC
GCCGACAATGGCGTGTGCGCCGTCATTCCCCTCCGCTACGTGGCCAAGTC
TATCTCGTGGCATCGCCGCGGTGACTACTTTGTTACCGTCTGCCCGGGCT
CTTCTACCCCGGCATCCATGGCCATTGCCATCCACACTCTTTCCAAGCAC
TTGACCCAGTACCCCTTCAGCCGACGCATCAAGGGTGGTGGCCCGCCCCA
GACCGCGCACTTCCACCCTCGAAGCCCATCCTCTTCGTCGCCAACCAGCG
CACCGTTCGTGCTTACGATCTCTCCCGCCAACTGCTCGTCAAGATCATTC
AGCCCGGTGCCCGCTGGATCTCCTCCTTCGACATCCACCCGACCTCCTCC
ACCGCTTCGGGAGGAGACAACCTCATTGTCGGATCCTACGACCGCCGTCT
GCTGTGGCATGATCTCGAACTCTCCCAGCGCCCCTACAAGACTCTCCGTT
ACCACCGCAAGGCCATTCGTGCCGTCAAGTTCCACCCCAGTGGCCGCTAC
CCTCTGTTCGCGGATGCCAGTGACGACGGCTCGCTCCAGATCTTCCACGG
CAGTGTCACGGGTGACATGCTCAGCAATGCCAGCATTGTGCCCCTCAAGG
TTCTTAAGGGCCACAAGATCACCGGCGAGCTCGGTGTCATGGATCTTGAC
TGGCACCCGCGCGAAGCCTGGTGTGTCAGTGCCGGTGCGGATGGAACCTG
CCGGTTATGGATGTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1831689..1834054+

>CAN33_45085-T1 ID=CAN33_45085-T1|Name=CAN33_45085-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4662bp|location=Sequence derived from alignment at NKJJ01000022.1:1831689..1834054+ (Aspergillus niger FDAARGOS_311)
ATGAGTGCTGCAAAGGTTTCCAAGAAGCGCAAGGCTGTCACCAAAGATGT
CGAGGAGGAGGCCGGTGTGTTCTCTGGCGACGAATTGAACGTCGGCGACA
TTGATGGTGCGCTTTCGGACGATGCCAACGACCTATCGAGCGACGAGGAG
GATTCCGAAGTTGAATTGGTAGACGACTTCAGCTCAGATGAGGATGAAGA
TGGAGAGGAGGAGTTGGACAGCGATGAGATCCCCTCCGACGGAGAGGCGC
CTCTCAAGAAGAAGTCCGGCACATCAGCTGCGGACCTAGAAGTACCTACG
AATGACGACGAGAGCTCCAGCGAGGAAGAGCAACCCAACTTCCGCATTGA
AAAGGATGCCAATGGAAACGACCGTTACATCTACGACGAGATCAACCCAG
ATGACAACTCCGATTACTCTGACGTCGAAGAGAATGCGAACACGATCGGT
AACATTCCGTTGTCTTTCTACGACCAGTACCCCCACATTGGCTACGACAT
CAATGGAAAGAAGATCATGCGTCCTGCCACTGGTGAGGCTCTGGATGCTT
TGCTTGACAGCATTGAGATCCCCAAGGGCTTCACCGGTCTGACTGATCCC
TCGACCGGTAAGCCTCTGGAGTTGAGCCAGGATGAGCTGGAGCTGCTGCG
CAAGGTGCAGATGAACGAAATTCCCGAGGAGGGCTACAACCCGTACGAGC
CTTTGATGGAATGGTTCAGTAACAAGCAGGAAATCATGCCCCTTAGTGCT
GCTCCGGAACCCAAGCGTCGCTTCGTTCCGTCAAAGCACGAAGCCAAGCG
GGTCATGAAGATTGTGAAGGCCATCCGCGAAGGTCGCATCCTGCCTTACA
AGCCCCCGTCGGAAGAGAAGGAGGAGGACCTCGAGCTTATCAATTATGAC
CTGTGGGCGGACGAGGCCGAGCGTCCGGACCACCCCATGCACGTTCCTGC
CCCCAAGCTCCCCCCGCCAGGCTACGAGGAGAGTTACCACCCGCCTCCGG
AGTATCTCCCCGACAACAAGGAGCGCAAGGCCTGGCAGGAGGCCGACCCC
GAAGACCGGGAGCGGGAATATCTCCCTACCGACTTTGGCTCTCTCCGCAA
GGTTCCTGGTTACGGCGAGTTTGTCAAGGAGAAGTTCGAGCGTTGCTTGG
ATCTCTACTTGGCTCCTAGAGTTCGCCGCAGCAAGCTCAACATCGACCCG
GAGAGTCTGCTCCCCAAGCTGCCCAGCCCTGAAGAGTTGAAGCCGTTCCC
GTCCGTCTGCGCTACGGTGTTCCGGGGACACAAGGGCCGTGTTCGTTCCC
TTGCCGTCGACCCTACGGGCGTGTGGCTCGCCACTGGTGGTGACGATGGT
ACCGTCCGCGTTTGGGAATTGCTCACCGGTCGCCAGCTGTATAGCGTCAA
GGTTGGTGAAGAGGATCCTGTCAACGTTGTCCGCTGGAGGCCCAGCAAGG
ATGCTGTGGTCCTAGCTGCCGCCGCGGGTGACGATATCTACCTCATCGTG
CCCCCGATCCTCGACCCCGAACTCGAGCAAGCCAGCTTGGATCTTCTCGA
CGCCGGCTGGGGATACGCCGCTTCGAAGCCTGCCCCGAAGGCCTCGGAAG
AAGGCAAGAAGACCACGCCTCCCCAGTGGGTGCGTCCCTCGGCCGCTCTC
GCCGACAATGGCGTGTGCGCCGTCATTCCCCTCCGCTACGTGGCCAAGTC
TATCTCGTGGCATCGCCGCGGTGACTACTTTGTTACCGTCTGCCCGGGCT
CTTCTACCCCGGCATCCATGGCCATTGCCATCCACACTCTTTCCAAGCAC
TTGACCCAGTACCCCTTCAGCCGACGCATCAAGGGTGGTGGCCCGCCCCA
GACCGCGCACTTCCACCCTCGAAGCCCATCCTCTTCGTCGCCAACCAGCG
CACCGTTCATCATTCAGCCCGGTGCCCGCTGGATCTCCTCCTTCGACATC
CACCCGACCTCCTCCACCGCTTCGGGAGGAGACAACCTCATTGTCGGATC
CTACGACCGCCGTCTGCTGTGGCATGATCTCGAACTCTCCCAGCGCCCCT
ACAAGACTCTCCGTTACCACCGCAAGGCCATTCGTGCCGTCAAGTTCCAC
CCCAGTGGCCGCTACCCTCTGTTCGCGGATGCCAGTGACGACGGCTCGCT
CCAGATCTTCCACGGCAGTGTCACGGGTGACATGCTCAGCAATGCCAGCA
TTGTGCCCCTCAAGGTTCTTAAGGGCCACAAGATCACCGGCGAGCTCGGT
GTCATGGATCTTGACTGGCACCCGCGCGAAGCCTGGTGTGTCAGTGCCGG
TGCGGATGGAACCTGCCGGTTATGGATGTAAATGAGTGCTGCAAAGGTTT
CCAAGAAGCGCAAGGCTGTCACCAAAGATGTCGAGGAGGAGGCCGGTGTG
TTCTCTGGCGACGAATTGAACGTCGGCGACATTGATGGTGCGCTTTCGGA
CGATGCCAACGACCTATCGAGCGACGAGGAGGATTCCGAAGTTGAATTGG
TAGACGACTTCAGCTCAGATGAGGATGAAGATGGAGAGGAGGAGTTGGAC
AGCGATGAGATCCCCTCCGACGGAGAGGCGCCTCTCAAGAAGAAGTCCGG
CACATCAGCTGCGGACCTAGAAGTACCTACGAATGACGACGAGAGCTCCA
GCGAGGAAGAGCAACCCAACTTCCGCATTGAAAAGGATGCCAATGGAAAC
GACCGTTACATCTACGACGAGATCAACCCAGATGACAACTCCGATTACTC
TGACGTCGAAGAGAATGCGAACACGATCGGTAACATTCCGTTGTCTTTCT
ACGACCAGTACCCCCACATTGGCTACGACATCAATGGAAAGAAGATCATG
CGTCCTGCCACTGGTGAGGCTCTGGATGCTTTGCTTGACAGCATTGAGAT
CCCCAAGGGCTTCACCGGTCTGACTGATCCCTCGACCGGTAAGCCTCTGG
AGTTGAGCCAGGATGAGCTGGAGCTGCTGCGCAAGGTGCAGATGAACGAA
ATTCCCGAGGAGGGCTACAACCCGTACGAGCCTTTGATGGAATGGTTCAG
TAACAAGCAGGAAATCATGCCCCTTAGTGCTGCTCCGGAACCCAAGCGTC
GCTTCGTTCCGTCAAAGCACGAAGCCAAGCGGGTCATGAAGATTGTGAAG
GCCATCCGCGAAGGTCGCATCCTGCCTTACAAGCCCCCGTCGGAAGAGAA
GGAGGAGGACCTCGAGCTTATCAATTATGACCTGTGGGCGGACGAGGCCG
AGCGTCCGGACCACCCCATGCACGTTCCTGCCCCCAAGCTCCCCCCGCCA
GGCTACGAGGAGAGTTACCACCCGCCTCCGGAGTATCTCCCCGACAACAA
GGAGCGCAAGGCCTGGCAGGAGGCCGACCCCGAAGACCGGGAGCGGGAAT
ATCTCCCTACCGACTTTGGCTCTCTCCGCAAGGTTCCTGGTTACGGCGAG
TTTGTCAAGGAGAAGTTCGAGCGTTGCTTGGATCTCTACTTGGCTCCTAG
AGTTCGCCGCAGCAAGCTCAACATCGACCCGGAGAGTCTGCTCCCCAAGC
TGCCCAGCCCTGAAGAGTTGAAGCCGTTCCCGTCCGTCTGCGCTACGGTG
TTCCGGGGACACAAGGGCCGTGTTCGTTCCCTTGCCGTCGACCCTACGGG
CGTGTGGCTCGCCACTGGTGGTGACGATGGTACCGTCCGCGTTTGGGAAT
TGCTCACCGGTCGCCAGCTGTATAGCGTCAAGGTTGGTGAAGAGGATCCT
GTCAACGTTGTCCGCTGGAGGCCCAGCAAGGATGCTGTGGTCCTAGCTGC
CGCCGCGGGTGACGATATCTACCTCATCGTGCCCCCGATCCTCGACCCCG
AACTCGAGCAAGCCAGCTTGGATCTTCTCGACGCCGGCTGGGGATACGCC
GCTTCGAAGCCTGCCCCGAAGGCCTCGGAAGAAGGCAAGAAGACCACGCC
TCCCCAGTGGGTGCGTCCCTCGGCCGCTCTCGCCGACAATGGCGTGTGCG
CCGTCATTCCCCTCCGCTACGTGGCCAAGTCTATCTCGTGGCATCGCCGC
GGTGACTACTTTGTTACCGTCTGCCCGGGCTCTTCTACCCCGGCATCCAT
GGCCATTGCCATCCACACTCTTTCCAAGCACTTGACCCAGTACCCCTTCA
GCCGACGCATCAAGGGTGGTGGCCCGCCCCAGACCGCGCACTTCCACCCT
CGAAGCCCATCCTCTTCGTCGCCAACCAGCGCACCGTTCATCATTCAGCC
CGGTGCCCGCTGGATCTCCTCCTTCGACATCCACCCGACCTCCTCCACCG
CTTCGGGAGGAGACAACCTCATTGTCGGATCCTACGACCGCCGTCTGCTG
TGGCATGATCTCGAACTCTCCCAGCGCCCCTACAAGACTCTCCGTTACCA
CCGCAAGGCCATTCGTGCCGTCAAGTTCCACCCCAGTGGCCGCTACCCTC
TGTTCGCGGATGCCAGTGACGACGGCTCGCTCCAGATCTTCCACGGCAGT
GTCACGGGTGACATGCTCAGCAATGCCAGCATTGTGCCCCTCAAGGTTCT
TAAGGGCCACAAGATCACCGGCGAGCTCGGTGTCATGGATCTTGACTGGC
ACCCGCGCGAAGCCTGGTGTGTCAGTGCCGGTGCGGATGGAACCTGCCGG
TTATGGATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERB1CAN33_45085Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45085-T1.exon1CAN33_45085-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_45085-T1.exon2CAN33_45085-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45085-T1.cdsCAN33_45085-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_45085-T1CAN33_45085-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092612LP
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR028598
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR012953
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
DBxrefPFAM:PF08145
ProductRibosome bioproteinsis protein erb1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1831689..1834054 +
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